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OP542242.1__UYB98424.1__X__00026

Bact-Vir

OP542242.1__UYB98424.1__X__00026

Identity

Accession:
OP542242 ↗
Kingdom:
phage

Quality

62.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Oshimavirus› Thermus_phage_P23-45

TaxID: 2914006

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-174
PDB
D2 high residues 276-561
PDB
Domain cluster: rep: aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00112__D438-482_516-700
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dadA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.76 34.0 5.13e-01 71.0% 96.1%
3crnA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 33.0 4.94e-01 71.0% 93.8%
1a04A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.74 34.0 5.12e-01 71.0% 100.0%
4igiA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.73 47.0 5.69e-01 70.6% 94.4%
4f1jA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.73 50.0 6.02e-01 87.1% 100.0%
1d5wA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 33.0 4.96e-01 85.0% 99.2%
3h5iA00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.72 33.0 4.89e-01 70.3% 96.8%
3ibsA00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.70 50.0 5.92e-01 83.6% 100.0%
1f8yA00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 35.0 4.72e-01 84.6% 93.6%
1puiA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 39.0 4.96e-01 96.5% 97.6%
1u04A03 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.65 36.0 4.52e-01 90.6% 86.0%
1di0A00 3.40.50.960 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase 0.65 34.0 4.66e-01 84.6% 96.6%
1s2gB00 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.65 37.0 4.76e-01 85.3% 94.6%
2cb0A02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.64 32.0 4.30e-01 86.7% 88.2%
2c2xA02 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.63 35.0 4.65e-01 89.2% 98.1%
1qgnG01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.63 34.0 3.62e-01 88.1% 57.5%
3uugA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 37.0 4.50e-01 87.4% 88.4%
1b93B00 3.40.50.1380 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain 0.61 30.0 4.05e-01 83.6% 86.8%
2zj3A02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.61 31.0 4.14e-01 85.7% 90.5%
3tbfA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.61 31.0 4.21e-01 86.7% 92.6%
2eihA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.60 32.0 4.36e-01 86.0% 100.0%
2nytD00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.58 31.0 3.88e-01 90.6% 82.1%
4j8lA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.57 31.0 3.34e-01 89.5% 58.8%
5b1hA02 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 23.0 3.73e-01 81.5% 100.0%
3e1uA00 3.40.140.10 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 0.57 32.0 3.85e-01 90.2% 81.5%
4lgvA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.57 37.0 4.45e-01 83.9% 97.4%
2qtlA03 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.56 29.0 3.77e-01 81.1% 87.7%
2vbiA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.55 36.0 4.36e-01 90.2% 100.0%
2px0A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.54 33.0 3.99e-01 83.2% 92.4%
6ifsB01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 36.0 4.24e-01 92.7% 97.9%
1a9yA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 37.0 4.29e-01 70.3% 96.2%
2x7jA01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.52 35.0 4.19e-01 90.2% 99.0%
7v7yA01 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.52 42.0 4.24e-01 90.6% 82.0%
2f6uA00 3.20.20.390 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › FMN-linked oxidoreductases 0.51 33.0 3.63e-01 86.0% 78.8%
3h8gA01 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.51 28.0 3.68e-01 79.7% 95.0%
3vv3A00 3.40.50.200 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain 0.50 44.0 4.19e-01 90.9% 98.2%
2bpoA04 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.50 29.0 3.76e-01 82.2% 98.8%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4969900 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.81 49.0 6.40e-01 81.8% 100.0%
5041045 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.80 50.0 6.11e-01 85.0% 93.2%
4991152 2006.1.6.24 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF2201 0.79 42.0 5.92e-01 81.8% 100.0%
3933629 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.78 48.0 5.91e-01 84.6% 94.1%
3927885 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.77 49.0 5.98e-01 87.1% 94.7%
3258554 2006.1.6.13 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 0.77 50.0 6.12e-01 85.0% 97.9%
3773060 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.76 50.0 5.44e-01 88.8% 78.3%
3863212 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.76 50.0 6.00e-01 85.7% 96.4%
5062313 2006.1.6.45 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › PF30231 0.75 54.0 6.34e-01 90.9% 100.0%
3779727 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.75 48.0 5.78e-01 82.2% 92.3%
3529481 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.75 48.0 5.85e-01 83.6% 95.8%
3846473 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.74 47.0 5.68e-01 83.6% 91.0%
3602816 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.74 52.0 5.84e-01 93.4% 89.1%
3796939 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.74 49.0 5.42e-01 84.3% 82.2%
4943635 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.72 51.0 6.10e-01 82.5% 100.0%
3625746 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 48.0 5.52e-01 88.1% 88.6%
3586874 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.71 65.0 6.48e-01 98.6% 92.2%
136176 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.70 50.0 5.92e-01 83.6% 100.0%
5001772 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 67.0 6.57e-01 99.7% 95.7%
3747202 2006.1.6.1 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA 0.69 50.0 4.37e-01 90.2% 51.0%
3898837 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.68 46.0 5.33e-01 83.6% 91.9%
4948073 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.68 61.0 6.35e-01 93.7% 99.3%
4975061 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.67 48.0 5.65e-01 84.3% 100.0%
4943066 2007.3.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains 0.67 37.0 4.92e-01 84.6% 98.7%
3290499 2006.1.6.21 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.66 56.0 5.61e-01 94.8% 85.0%
2754667 2007.3.1.3 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Succ_CoA_lig 0.66 38.0 4.97e-01 96.9% 98.8%
4009542 2006.1.6.21 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_CoxE 0.65 56.0 5.67e-01 94.8% 89.6%
3471285 2006.1.6.4 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N 0.65 53.0 5.47e-01 83.2% 90.7%
3924011 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.65 47.0 5.36e-01 88.8% 95.9%
4943607 2006.1.6.0 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like 0.65 52.0 5.68e-01 93.7% 97.1%
4547621 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.61 31.0 3.93e-01 86.7% 78.3%
4278664 2006.1.6.12 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 0.61 50.0 5.09e-01 83.6% 100.0%
119269 2492.1.1.21 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC2 0.60 32.0 3.92e-01 92.3% 77.1%
3852865 2492.1.1.23 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NAD2 0.60 32.0 4.00e-01 92.7% 80.5%
3568886 2492.1.1.29 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › APOBEC4_like 0.59 32.0 3.63e-01 88.1% 67.9%
3187631 2006.1.6.33 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 0.59 48.0 4.92e-01 83.9% 96.1%
4971463 2007.6.1.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain 0.58 31.0 3.86e-01 88.5% 80.6%
4984246 2007.3.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Citrate_bind 0.57 34.0 4.10e-01 97.2% 87.6%
4871072 2492.1.1.23 ↗ a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › NAD2 0.57 31.0 3.79e-01 92.0% 78.0%
4429345 2004.1.1.73 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.57 34.0 4.23e-01 83.6% 92.8%
None — 0.55 30.0 3.70e-01 93.7% 80.9%
3356118 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.52 31.0 3.74e-01 88.5% 86.6%