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OP542242.1__UYB98444.1__X__00046

Bact-Vir

OP542242.1__UYB98444.1__X__00046

Identity

Accession:
OP542242 ↗
Kingdom:
phage

Quality

74.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Oshimavirus› Thermus_phage_P23-45

TaxID: 2914006

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-80
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 57.0 5.41e-01 92.2% 89.1%
1faoA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 56.0 5.24e-01 92.2% 89.0%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 56.0 5.36e-01 92.2% 84.9%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 56.0 5.13e-01 92.2% 90.3%
4iapA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 56.0 5.30e-01 92.2% 92.4%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.68 55.0 5.15e-01 92.2% 86.9%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 54.0 5.13e-01 92.2% 91.7%
4wj7D00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 53.0 4.64e-01 92.2% 97.6%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 52.0 4.73e-01 92.2% 92.6%
3fm8D03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 51.0 4.66e-01 92.2% 86.1%
3g1jA00 2.30.30.350 Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. 0.60 44.0 4.27e-01 89.6% 67.8%
1y9lA00 2.40.128.230 Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM 0.60 43.0 3.89e-01 77.9% 97.3%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.59 49.0 4.06e-01 92.2% 94.3%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.59 41.0 4.15e-01 100.0% 72.7%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 37.0 4.00e-01 92.2% 78.5%
2lt1A00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.57 39.0 3.95e-01 70.1% 88.0%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 40.0 4.26e-01 93.5% 86.2%
3fm2A00 3.40.1570.10 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains 0.56 45.0 3.87e-01 92.2% 86.5%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.56 40.0 3.70e-01 100.0% 59.2%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 42.0 3.61e-01 81.8% 82.7%
4azpA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 40.0 3.40e-01 80.5% 80.6%
3x3nA04 2.40.50.910 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Type VII secretion system EccB, repeat 3 domain 0.53 41.0 3.92e-01 94.8% 73.0%
4bdxA00 2.10.25.10 Mainly Beta › Ribbon › Laminin › Laminin 0.53 38.0 3.77e-01 76.6% 79.5%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 37.0 2.91e-01 74.0% 34.5%
1m5hA02 3.30.70.520 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 39.0 3.27e-01 83.1% 92.5%
2nysA00 2.30.30.220 Mainly Beta › Roll › SH3 type barrels. › SspB-like 0.52 41.0 3.60e-01 88.3% 57.3%
1ynjJ02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 37.0 4.04e-01 88.3% 93.5%
1xovA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 38.0 3.97e-01 96.1% 90.3%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.50 36.0 3.78e-01 76.6% 91.0%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3587958 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.72 59.0 5.63e-01 92.2% 100.0%
3619334 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 58.0 5.56e-01 92.2% 94.4%
3566967 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.70 58.0 5.27e-01 92.2% 75.2%
3756160 220.1.1.33 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.70 57.0 4.70e-01 92.2% 64.8%
3224246 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 56.0 5.13e-01 90.9% 91.3%
3244890 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 57.0 4.98e-01 92.2% 80.8%
3584295 220.1.1.118 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH 0.69 57.0 4.90e-01 92.2% 71.2%
3874132 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.69 57.0 5.04e-01 92.2% 68.7%
3929135 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 56.0 5.15e-01 92.2% 90.5%
3777215 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 57.0 5.24e-01 90.9% 88.0%
3273591 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 56.0 4.80e-01 92.2% 65.4%
3896415 220.1.1.7 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.69 56.0 5.32e-01 92.2% 91.6%
4208333 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 57.0 5.01e-01 94.8% 76.7%
3789602 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 56.0 4.86e-01 92.2% 74.4%
4026264 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 58.0 4.72e-01 96.1% 86.0%
3584264 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 56.0 4.84e-01 92.2% 74.4%
3274553 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 55.0 5.06e-01 92.2% 94.3%
3912099 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 55.0 5.04e-01 92.2% 84.8%
3388895 220.1.1.170 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_alsin 0.67 55.0 4.99e-01 92.2% 73.6%
3305101 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 55.0 4.50e-01 92.2% 78.7%
3792816 220.1.1.33 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_8 0.67 54.0 4.78e-01 92.2% 75.0%
3923930 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 54.0 4.89e-01 92.2% 81.8%
4996362 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.66 54.0 4.89e-01 92.2% 79.6%
3936608 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 55.0 4.97e-01 94.8% 88.2%
3627795 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 51.0 4.96e-01 84.4% 80.0%
3841924 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 53.0 4.81e-01 92.2% 81.8%
3260945 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 41.0 4.59e-01 89.6% 81.7%
3228944 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 53.0 4.80e-01 92.2% 79.1%
3882657 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 53.0 4.85e-01 92.2% 82.9%
5059922 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 53.0 4.99e-01 92.2% 90.5%
5021724 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 53.0 5.28e-01 92.2% 95.0%
3473908 220.1.1.157 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29715 0.65 54.0 4.31e-01 94.8% 53.3%
5007103 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 51.0 5.10e-01 92.2% 93.8%
3735661 896.1.1.0 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.63 46.0 4.20e-01 87.0% 57.1%
3449498 4286.1.1.1 ↗ beta complex topology › At5g01610-like › At5g01610-like › At5g01610-like › DUF538 0.62 51.0 4.41e-01 88.3% 63.5%
4962251 220.1.1.87 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.62 50.0 4.25e-01 92.2% 79.3%
3283966 3844.2.1.1 ↗ a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.61 42.0 3.02e-01 72.7% 45.4%
4890129 220.1.1.44 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › POB3_N 0.60 50.0 4.60e-01 96.1% 89.4%
1875530 12.3.1.19 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.59 40.0 2.87e-01 70.1% 73.5%
3511074 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.57 42.0 2.87e-01 100.0% 19.5%
4968613 2003.1.2.38 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lycopene_cycl 0.57 50.0 3.21e-01 100.0% 64.8%
3687323 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.56 42.0 4.50e-01 90.9% 93.8%
4368436 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.55 40.0 2.73e-01 77.9% 43.7%
3604653 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.53 44.0 2.92e-01 97.4% 66.8%
5036656 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.53 35.0 3.81e-01 81.8% 86.7%
1031167 3708.1.1.1 ↗ a+b three layers › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › ESX-1 secretion system protein eccB1 modular domains › T7SS_ESX1_EccB 0.53 40.0 3.92e-01 94.8% 74.7%
4437811 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 43.0 3.52e-01 92.2% 68.7%
4427420 4.1.1.436 ↗ beta barrels › SH3 › SH3 › SH3 › PF29249 0.52 38.0 3.77e-01 92.2% 75.0%
4489484 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.52 44.0 2.76e-01 94.8% 92.6%
3409803 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.52 41.0 2.71e-01 88.3% 24.8%
3361094 284.2.1.1 ↗ a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain › Glyco_hydro_18 0.51 45.0 2.92e-01 100.0% 21.4%
3834882 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.51 45.0 2.92e-01 100.0% 83.9%
4020699 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.51 44.0 2.83e-01 100.0% 20.6%
3414114 2002.1.1.30 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 0.50 41.0 2.63e-01 88.3% 88.5%
4147983 5.1.4.126 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Striatin 0.50 43.0 2.79e-01 96.1% 91.8%