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OP562166.1__UZV39828.1__X__00042
Bact-VirOP562166.1__UZV39828.1__X__00042
Identity
- Accession:
- OP562166 ↗
- Kingdom:
- phage
Quality
72.8
mean pLDDT
Taxonomy
TaxID: 2995629
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-96
Domain cluster:
rep: OM158235.1__UKL14789.1__C121_56__00056__D25-97
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3v9rB00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.73 | 37.0 | 4.16e-01 | 96.7% | 63.9% |
| 3s6bA01 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.68 | 55.0 | 3.94e-01 | 87.0% | 36.9% |
| 3eo7A02 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.66 | 52.0 | 3.74e-01 | 83.7% | 72.2% |
| 4j0eA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.66 | 34.0 | 2.59e-01 | 85.9% | 22.3% |
| 1sdoA00 | 3.40.91.20 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.65 | 50.0 | 3.92e-01 | 81.5% | 78.1% |
| 4km3B00 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.64 | 53.0 | 3.78e-01 | 90.2% | 45.1% |
| 3hr0B01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.64 | 42.0 | 4.50e-01 | 98.9% | 77.2% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 41.0 | 4.45e-01 | 96.7% | 78.7% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.63 | 49.0 | 3.92e-01 | 81.5% | 70.5% |
| 3e98B00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.63 | 55.0 | 4.54e-01 | 98.9% | 78.2% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.63 | 43.0 | 3.24e-01 | 98.9% | 30.6% |
| 4dn2A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 48.0 | 3.73e-01 | 82.6% | 76.4% |
| 6twjA02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.61 | 49.0 | 3.71e-01 | 88.0% | 72.7% |
| 1xgsA01 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.61 | 50.0 | 3.78e-01 | 89.1% | 56.0% |
| 3g14B00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 48.0 | 3.79e-01 | 82.6% | 77.5% |
| 2freA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 47.0 | 3.65e-01 | 82.6% | 70.9% |
| 5j6cA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.61 | 47.0 | 3.82e-01 | 82.6% | 79.2% |
| 2dg8D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.60 | 51.0 | 4.14e-01 | 92.4% | 63.6% |
| 3p01A01 | 6.10.140.590 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 46.0 | 4.81e-01 | 83.7% | 92.8% |
| 3h4oA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.59 | 46.0 | 3.72e-01 | 82.6% | 76.6% |
| 3eo7A01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.58 | 45.0 | 3.32e-01 | 82.6% | 71.9% |
| 3bemB00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.58 | 46.0 | 3.53e-01 | 85.9% | 81.3% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 47.0 | 3.36e-01 | 91.3% | 53.4% |
| 3gagA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.58 | 46.0 | 3.53e-01 | 85.9% | 81.1% |
| 3bm1A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 44.0 | 3.57e-01 | 82.6% | 83.6% |
| 2vk9A04 | 1.10.274.80 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.57 | 47.0 | 4.57e-01 | 90.2% | 98.1% |
| 3hj9B00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.57 | 43.0 | 3.35e-01 | 82.6% | 76.2% |
| 1hwyA01 | 1.10.287.140 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 31.0 | 3.90e-01 | 88.0% | 94.1% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.56 | 47.0 | 4.23e-01 | 90.2% | 65.9% |
| 1l3lA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.55 | 41.0 | 3.36e-01 | 78.3% | 80.0% |
| 4urpA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.55 | 43.0 | 3.49e-01 | 84.8% | 83.7% |
| 7cj3A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 42.0 | 3.15e-01 | 85.9% | 64.7% |
| 3iu0A00 | 3.90.1360.10 | Alpha Beta › Alpha-Beta Complex › Microbial transglutaminase. Chain: a › Protein-glutamine gamma-glutamyltransferase | 0.54 | 47.0 | 3.18e-01 | 97.8% | 37.6% |
| 2r01A01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.54 | 43.0 | 3.67e-01 | 87.0% | 88.2% |
| 4qkyA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.54 | 35.0 | 3.77e-01 | 78.3% | 81.1% |
| 3ppuB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 40.0 | 3.72e-01 | 81.5% | 69.0% |
| 3qmlD00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.51 | 35.0 | 2.60e-01 | 72.8% | 28.6% |
| 1bixA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.51 | 41.0 | 2.98e-01 | 89.1% | 56.4% |
| 8cdaB03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.51 | 46.0 | 3.81e-01 | 98.9% | 94.3% |
| 3k6hA01 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.50 | 40.0 | 3.36e-01 | 88.0% | 86.8% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965610 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.71 | 40.0 | 4.22e-01 | 90.2% | 60.0% |
| 3347379 | 3470.1.1.26 ↗ | extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › DUF543 | 0.69 | 40.0 | 4.69e-01 | 93.5% | 81.5% |
| 3163846 | 283.1.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 | 0.67 | 55.0 | 3.94e-01 | 89.1% | 37.3% |
| 3935661 | 109.4.1.375 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRC8_N | 0.66 | 43.0 | 2.97e-01 | 98.9% | 20.0% |
| 3688914 | 283.1.1.4 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › ThrE | 0.65 | 48.0 | 4.15e-01 | 77.2% | 58.6% |
| 3509258 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.65 | 43.0 | 3.34e-01 | 100.0% | 31.0% |
| 4927939 | 283.1.1.1 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Peptidase_M24 | 0.65 | 53.0 | 4.03e-01 | 89.1% | 45.6% |
| 3545977 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.64 | 46.0 | 5.16e-01 | 75.0% | 98.6% |
| 3960437 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 42.0 | 3.43e-01 | 97.8% | 36.5% |
| 3693018 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.63 | 55.0 | 4.63e-01 | 93.5% | 76.0% |
| 3267786 | 864.1.1.0 ↗ | a+b two layers › DLC › DLC › DLC | 0.63 | 47.0 | 4.96e-01 | 79.3% | 97.5% |
| 5067760 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.62 | 48.0 | 4.88e-01 | 89.1% | 84.4% |
| 4338608 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.61 | 52.0 | 4.62e-01 | 94.6% | 77.8% |
| 5039697 | 2008.1.1.224 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_3 | 0.61 | 44.0 | 4.10e-01 | 76.1% | 79.8% |
| 5008605 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.60 | 49.0 | 4.12e-01 | 92.4% | 81.8% |
| 3840081 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.59 | 49.0 | 4.21e-01 | 88.0% | 71.3% |
| 5038948 | 2008.1.1.224 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_3 | 0.59 | 41.0 | 3.75e-01 | 71.7% | 79.8% |
| 3706847 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.58 | 47.0 | 3.34e-01 | 87.0% | 39.6% |
| 3593858 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.56 | 40.0 | 2.72e-01 | 75.0% | 37.4% |
| 4010998 | 3291.1.1.1 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Snf7 | 0.56 | 50.0 | 4.07e-01 | 100.0% | 54.3% |
| 4959375 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.55 | 42.0 | 3.39e-01 | 82.6% | 76.4% |
| None | — | 0.55 | 39.0 | 2.69e-01 | 72.8% | 38.0% | |
| 3932690 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.54 | 43.0 | 4.44e-01 | 93.5% | 87.8% |
| None | — | 0.54 | 39.0 | 2.75e-01 | 77.2% | 39.0% | |
| 3485540 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.54 | 43.0 | 3.52e-01 | 87.0% | 68.0% |
| 3217269 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.54 | 37.0 | 4.15e-01 | 77.2% | 95.7% |
| 3223743 | 228.1.1.2 ↗ | a+b three layers › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › Fe,Mn superoxide dismutase (SOD)-C › DUF5352 | 0.53 | 41.0 | 4.26e-01 | 81.5% | 100.0% |
| 5041309 | 4969.1.1.0 ↗ | alpha bundles › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I › thumb domain in bacteriophage RB69-like DNA polymerase I | 0.53 | 42.0 | 3.44e-01 | 84.8% | 92.9% |
| 3609798 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.53 | 46.0 | 4.32e-01 | 96.7% | 87.0% |
| 5002651 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.53 | 39.0 | 3.96e-01 | 79.3% | 85.3% |
| 4082876 | 198.1.1.13 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, PF31278 | 0.53 | 39.0 | 4.11e-01 | 78.3% | 92.5% |
| 3226435 | 864.1.1.3 ↗ | a+b two layers › DLC › DLC › DLC › Ground-like | 0.53 | 36.0 | 3.96e-01 | 78.3% | 94.3% |
| 3414399 | 5086.1.1.106 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › DUF725 | 0.51 | 47.0 | 3.79e-01 | 98.9% | 61.2% |
| 3386319 | 503.1.1.0 ↗ | extended segments › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein › N-terminal domain of bifunctional PutA protein | 0.51 | 38.0 | 3.71e-01 | 78.3% | 79.0% |
| 3670241 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.51 | 40.0 | 2.86e-01 | 89.1% | 42.0% |
| 136888 | 304.103.1.1 ↗ | a+b two layers › Alpha-beta plaits › FMN-dependent nitroreductase-like › FMN-dependent nitroreductase-like › Nitroreductase | 0.51 | 41.0 | 3.27e-01 | 88.0% | 75.9% |
| 3642904 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.50 | 42.0 | 3.10e-01 | 92.4% | 56.1% |
| 3654043 | 246.3.1.3 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos_2 | 0.50 | 42.0 | 3.20e-01 | 92.4% | 62.7% |