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OP562166.1__UZV39837.1__X__00051

Bact-Vir

OP562166.1__UZV39837.1__X__00051

Identity

Accession:
OP562166 ↗
Kingdom:
phage

Quality

79.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-161
PDB
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00754.32 best F5_F8_type_C 42.5 9.70e-11 64.8% 61.4%
PF22633.4 F5_F8_type_C_2 33.3 8.70e-08 60.6% 72.2%
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4zxeC00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.87 63.0 6.43e-01 80.3% 76.5%
7wdtA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.80 61.0 5.98e-01 77.5% 76.7%
1loxA02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.71 53.0 5.89e-01 99.3% 98.2%
4nreA01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.68 54.0 5.77e-01 99.3% 98.3%
2zaiB03 2.60.40.3020 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 35.0 4.00e-01 86.6% 71.0%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.61 37.0 4.03e-01 100.0% 71.7%
3d30A02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.61 35.0 4.14e-01 89.4% 84.0%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.60 44.0 3.79e-01 75.4% 77.0%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 37.0 4.43e-01 100.0% 91.8%
4cucA05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 40.0 4.38e-01 88.0% 86.2%
1epfA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 33.0 3.87e-01 88.0% 84.4%
2vr3B02 2.60.40.1290 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 44.0 4.32e-01 92.3% 76.1%
4lk4A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 34.0 3.83e-01 87.3% 80.0%
2wv3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 34.0 3.89e-01 81.7% 85.0%
2kxtA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.55 49.0 4.63e-01 100.0% 82.1%
5lxvA01 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 45.0 4.28e-01 88.0% 93.5%
4zelB01 2.60.120.310 Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain 0.55 38.0 3.84e-01 71.8% 87.5%
4ncdA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 4.18e-01 100.0% 88.1%
3am2A02 2.60.120.1050 Mainly Beta › Sandwich › Jelly Rolls › 0.54 34.0 3.72e-01 71.1% 76.1%
3lcyA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 32.0 3.67e-01 81.7% 82.5%
2c9aA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 43.0 4.16e-01 99.3% 75.9%
2jllA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 32.0 3.69e-01 85.9% 85.3%
3kg5A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 33.0 3.77e-01 81.7% 85.4%
2qngA01 2.60.60.30 Mainly Beta › Sandwich › Lipoxygenase-1 › sav2460 like domains 0.53 47.0 4.54e-01 100.0% 90.3%
2rikA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 32.0 3.78e-01 88.7% 93.5%
2b3rA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 39.0 4.10e-01 91.5% 91.9%
4nofB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.87e-01 82.4% 91.5%
7ahsA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 30.0 3.63e-01 85.9% 92.0%
1y7bA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 38.0 3.38e-01 78.2% 70.3%
2z0uA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.51 40.0 4.14e-01 92.3% 92.2%
2ys4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 31.0 3.53e-01 85.9% 83.5%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2324084 10.32.1.2 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C 0.85 70.0 6.56e-01 84.5% 74.5%
3748870 10.32.1.105 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.83 78.0 7.50e-01 100.0% 96.2%
3568440 10.32.1.105 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.82 78.0 7.47e-01 100.0% 96.2%
3485554 10.32.1.105 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.81 77.0 6.86e-01 100.0% 82.1%
3235471 10.32.1.105 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.81 77.0 7.55e-01 100.0% 97.3%
3699596 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.80 75.0 6.83e-01 100.0% 98.4%
3934331 10.32.1.105 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.80 75.0 7.21e-01 100.0% 90.6%
3219798 10.32.1.105 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.79 75.0 7.18e-01 100.0% 88.7%
3934332 10.32.1.105 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.78 74.0 6.99e-01 100.0% 87.3%
3594435 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.78 73.0 6.35e-01 100.0% 96.2%
3748879 10.32.1.105 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 0.76 71.0 7.00e-01 100.0% 95.3%
3485556 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.72 66.0 6.18e-01 100.0% 91.4%
1273 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.71 53.0 5.87e-01 99.3% 98.2%
5014637 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.71 41.0 4.76e-01 82.4% 80.0%
3884808 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.69 53.0 5.71e-01 100.0% 95.0%
3560854 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.68 53.0 5.27e-01 100.0% 80.0%
3628368 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.67 54.0 5.75e-01 100.0% 98.4%
3512030 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.66 53.0 5.58e-01 100.0% 94.6%
3306124 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.64 54.0 5.41e-01 100.0% 89.0%
3438450 10.10.1.1 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.63 53.0 5.47e-01 100.0% 96.3%
3884425 11.1.1.566 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MOV-10_Ig-like 0.62 39.0 4.10e-01 100.0% 69.6%
3994426 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.60 46.0 4.99e-01 100.0% 95.8%
4346854 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.59 53.0 4.87e-01 100.0% 85.7%
4559658 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.59 53.0 4.73e-01 100.0% 87.2%
5028965 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 35.0 4.00e-01 100.0% 83.0%
4611950 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.58 52.0 4.75e-01 100.0% 80.0%
3169060 11.1.1.868 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26280 0.57 34.0 3.59e-01 90.1% 65.6%
3279144 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.57 51.0 4.86e-01 100.0% 87.6%
3930059 11.2.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › MNNL 0.57 42.0 4.73e-01 81.7% 100.0%
5081946 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 35.0 4.04e-01 87.3% 89.5%
3212541 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.56 47.0 4.94e-01 98.6% 99.2%
3639547 11.1.5.37 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › muHD 0.56 40.0 4.19e-01 73.9% 86.9%
4671862 10.1.1.41 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.55 41.0 3.62e-01 76.8% 75.2%
3719283 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.55 49.0 4.49e-01 100.0% 88.1%
3278588 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.55 49.0 4.59e-01 100.0% 83.9%
3278330 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.54 39.0 4.23e-01 93.0% 92.2%
5039862 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 33.0 3.79e-01 100.0% 88.0%
3278842 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.53 44.0 4.30e-01 100.0% 83.2%
3862043 11.1.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Zona_pellucida 0.53 41.0 3.86e-01 81.7% 73.5%
3278025 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.53 44.0 4.44e-01 100.0% 89.0%
3709448 10.37.1.0 beta sandwiches › jelly-roll › TerD › TerD 0.53 48.0 4.15e-01 100.0% 89.1%
1116431 10.37.1.1 beta sandwiches › jelly-roll › TerD › TerD › TerD 0.52 47.0 4.46e-01 100.0% 86.0%
3544174 11.1.5.95 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › TMEM132_3rd 0.52 41.0 4.11e-01 100.0% 82.1%
3592284 10.37.1.0 beta sandwiches › jelly-roll › TerD › TerD 0.52 46.0 4.35e-01 100.0% 85.5%
2474168 10.1.1.41 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › GH43_C2 0.52 39.0 3.49e-01 77.5% 65.0%
3902831 11.1.1.883 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_CFAP65_7th 0.52 34.0 3.74e-01 88.0% 83.6%
1714455 11.26.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Viral chemokine binding protein m3 › Viral chemokine binding protein m3 0.52 43.0 3.64e-01 91.5% 60.2%
5062090 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 34.0 3.70e-01 81.7% 80.9%
4117185 11.1.1.1105 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF25834 0.51 35.0 3.81e-01 100.0% 85.2%
3260971 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 32.0 3.49e-01 100.0% 75.7%
3196771 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.51 41.0 3.83e-01 95.1% 69.7%
3585360 11.1.1.842 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C 0.50 37.0 3.65e-01 100.0% 72.7%
D2 medium residues 166-194_211-233_273-298_374-434
PDB
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vveA01 2.60.120.770 Mainly Beta › Sandwich › Jelly Rolls › 0.57 34.0 4.14e-01 100.0% 89.2%
2lgnA00 2.60.40.2850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 29.0 3.83e-01 99.3% 100.0%
1s14B00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 33.0 3.02e-01 100.0% 46.6%
2je8B05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 30.0 3.63e-01 99.3% 83.1%
2vzsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 37.0 4.07e-01 98.6% 87.3%
2d93A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 26.0 2.72e-01 100.0% 47.0%
5ikuA01 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.50 34.0 3.84e-01 97.1% 91.3%
ECOD (20)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042218 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.59 39.0 4.68e-01 100.0% 97.9%
3938952 10.32.1.233 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_Hemicentin 0.59 31.0 3.73e-01 100.0% 74.7%
3934762 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.57 38.0 4.47e-01 99.3% 96.0%
184770 3370.1.1.1 beta sandwiches › Lactococcin 972 › Lactococcin 972 › Lactococcin 972 › Lactococcin_972 0.56 29.0 3.83e-01 99.3% 100.0%
3228358 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.56 38.0 4.47e-01 99.3% 100.0%
3935807 10.32.1.258 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_IRG7_N 0.56 35.0 4.35e-01 95.7% 100.0%
3220825 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 38.0 3.17e-01 100.0% 42.7%
3621693 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.55 29.0 3.17e-01 76.3% 60.0%
3796384 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.55 38.0 4.06e-01 100.0% 80.0%
3238330 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 37.0 3.14e-01 100.0% 43.6%
3570185 10.10.1.0 beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) 0.54 27.0 2.99e-01 92.8% 54.8%
1178585 227.1.1.13 a+b two layers › DNA clamp › DNA clamp › DNA clamp › Herpes_DNAp_acc 0.54 26.0 2.60e-01 86.3% 41.1%
5082706 10.29.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins › Siphovirus-type_tail_C 0.53 35.0 3.69e-01 99.3% 75.0%
3933402 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.53 36.0 3.90e-01 100.0% 82.6%
5038687 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.53 36.0 4.23e-01 98.6% 98.0%
3519988 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.52 37.0 4.12e-01 100.0% 91.8%
3618320 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 36.0 4.03e-01 99.3% 92.6%
5027060 5095.1.1.1 beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 0.51 36.0 3.78e-01 97.8% 78.5%
5045352 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.51 36.0 4.10e-01 100.0% 96.2%
3934767 11.1.1.1087 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GBD_Hemicentin 0.50 30.0 3.53e-01 100.0% 84.0%
D3 medium residues 195-210_234-272_299-373
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wp3T00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 33.0 3.66e-01 99.2% 78.8%
3rpiB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 33.0 3.70e-01 97.7% 84.7%