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OP589283.1__UYE93579.1__X__00182

Bact-Vir

OP589283.1__UYE93579.1__X__00182

Identity

Accession:
OP589283 ↗
Kingdom:
phage

Quality

62.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Shewanella_phage_FishSpeaker

TaxID: 2985553

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-139
PDB
Domain cluster: rep: OR493421.1__WNY41022.1__X__00138__D25-130
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dkxA02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.74 30.0 3.87e-01 97.0% 63.7%
7ldgA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.59 32.0 2.74e-01 97.8% 32.3%
1inpA02 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.56 47.0 4.24e-01 90.3% 98.4%
2lquA01 1.20.1420.40 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Decorin-binding protein 0.56 42.0 4.06e-01 95.5% 68.8%
1w99A01 1.20.190.10 Mainly Alpha › Up-down Bundle › Delta-Endotoxin; domain 1 › Pesticidal crystal protein, N-terminal domain 0.55 40.0 3.68e-01 74.6% 99.4%
2f2bA00 1.20.1080.10 Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. 0.55 48.0 4.00e-01 97.8% 85.3%
5fj8A06 1.10.132.30 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain 0.54 47.0 4.59e-01 95.5% 100.0%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 40.0 3.56e-01 94.8% 55.3%
5mawD00 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.52 47.0 3.79e-01 98.5% 69.6%
1p8dB00 1.10.565.10 Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor 0.52 46.0 3.79e-01 95.5% 82.8%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.52 37.0 4.07e-01 99.3% 90.0%
5h5mA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.51 39.0 4.03e-01 81.3% 100.0%
3fhnA04 1.20.58.670 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D 0.51 42.0 4.31e-01 91.0% 96.9%
2ap3A00 1.20.120.570 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like 0.50 43.0 3.91e-01 96.3% 90.1%
7ae2A01 1.20.120.580 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › bsu32300-like 0.50 39.0 3.95e-01 84.3% 99.3%
1w2yA00 1.10.4010.10 Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase 0.50 40.0 3.40e-01 91.8% 50.9%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3894478 604.9.1.2 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Strabismus 0.65 48.0 5.35e-01 95.5% 99.0%
3517583 4177.1.1.26 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › PKK 0.61 45.0 3.97e-01 77.6% 81.0%
3243644 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 39.0 4.18e-01 91.0% 82.6%
3789529 604.12.1.4 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT1 0.56 34.0 3.49e-01 99.3% 61.5%
4015486 601.4.1.60 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › TMD0_ABC 0.54 38.0 3.55e-01 71.6% 96.4%
4946154 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.54 40.0 3.46e-01 78.4% 69.8%
3934868 168.1.1.0 ↗ alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain 0.54 43.0 4.37e-01 90.3% 85.9%
4018914 5069.1.3.0 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits 0.53 37.0 3.65e-01 91.8% 68.6%
4448573 601.1.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.52 44.0 4.14e-01 92.5% 86.7%
3700729 601.39.1.0 ↗ alpha bundles › Four-helical up-and-down bundle › Enhancer of filamentation 1 › Enhancer of filamentation 1 0.52 40.0 3.90e-01 85.1% 94.8%
3821321 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.51 45.0 4.40e-01 97.0% 91.3%
4680076 3754.1.1.1 ↗ alpha bundles › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Bacterial cell wall synthesis membrane enzyme MraY-related › Glycos_transf_4 0.51 42.0 3.21e-01 87.3% 57.5%
3965917 3706.1.1.1 ↗ alpha bundles › Conserved type six secretion component TssL-related › Conserved type six secretion component TssL-related › Conserved type six secretion component TssL-related › DotU 0.51 42.0 3.79e-01 88.8% 73.5%
3920202 601.16.1.15 ↗ alpha bundles › Four-helical up-and-down bundle › FAT domain of focal adhesion kinase › FAT domain of focal adhesion kinase › CRIC_ras_sig 0.50 40.0 4.02e-01 90.3% 83.6%
3964603 601.14.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin 0.50 39.0 4.11e-01 82.8% 96.5%
D2 high residues 141-230
PDB