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OP596612.1__WAX24264.1__X__00011
Bact-VirOP596612.1__WAX24264.1__X__00011
Identity
- Accession:
- OP596612 ↗
- Kingdom:
- phage
Quality
82.8
mean pLDDT
Taxonomy
TaxID: 3003362
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 45-115
Domain cluster:
rep: MN988552.1__QIG76098.1__EVC24_077__00077__D16-82
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ms4A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 57.0 | 4.16e-01 | 94.4% | 62.8% |
| 4ms4B02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.65 | 57.0 | 4.25e-01 | 97.2% | 76.7% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.62 | 46.0 | 3.94e-01 | 78.9% | 51.8% |
| 1kcgC00 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.62 | 43.0 | 3.25e-01 | 71.8% | 70.0% |
| 2a1vA00 | 3.90.1150.30 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.61 | 40.0 | 3.22e-01 | 80.3% | 34.8% |
| 2y3vD00 | 2.170.210.20 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › Spindle assembly abnormal protein 6, N-terminal domain | 0.61 | 43.0 | 3.38e-01 | 74.6% | 91.6% |
| 2xp1A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 43.0 | 4.04e-01 | 78.9% | 63.2% |
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 46.0 | 4.18e-01 | 84.5% | 65.0% |
| 1h9oA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.60 | 46.0 | 4.06e-01 | 84.5% | 58.3% |
| 2eobA01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.59 | 44.0 | 3.87e-01 | 83.1% | 54.9% |
| 1llnA01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.58 | 40.0 | 3.13e-01 | 74.6% | 48.0% |
| 3vmaA03 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.54 | 36.0 | 3.35e-01 | 71.8% | 54.4% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.54 | 38.0 | 3.58e-01 | 83.1% | 60.5% |
| 2f51A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 42.0 | 3.71e-01 | 88.7% | 95.5% |
| 2xzhA00 | 2.130.10.110 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Clathrin heavy-chain terminal domain | 0.52 | 44.0 | 2.91e-01 | 100.0% | 52.2% |
| 7lfbH01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.15e-01 | 83.1% | 47.0% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.51 | 39.0 | 3.45e-01 | 84.5% | 73.6% |
| 7mxdX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 37.0 | 3.10e-01 | 83.1% | 46.2% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030628 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.74 | 45.0 | 2.66e-01 | 70.4% | 8.6% |
| 3505544 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.70 | 60.0 | 4.05e-01 | 94.4% | 85.8% |
| 3363215 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.67 | 57.0 | 4.24e-01 | 93.0% | 85.1% |
| 3915500 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.67 | 59.0 | 4.31e-01 | 97.2% | 77.8% |
| 3894523 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.66 | 58.0 | 4.19e-01 | 97.2% | 77.9% |
| 3934930 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.66 | 57.0 | 4.14e-01 | 97.2% | 78.5% |
| 3842923 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 58.0 | 4.28e-01 | 97.2% | 81.7% |
| 3856372 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 57.0 | 4.16e-01 | 97.2% | 77.9% |
| 3403871 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 56.0 | 4.09e-01 | 98.6% | 72.7% |
| 3583928 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.65 | 47.0 | 4.19e-01 | 78.9% | 59.0% |
| 3412045 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.64 | 56.0 | 4.18e-01 | 98.6% | 61.1% |
| 3890372 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 48.0 | 4.21e-01 | 83.1% | 60.0% |
| 3477642 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.62 | 53.0 | 4.50e-01 | 95.8% | 58.3% |
| 4994059 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.62 | 47.0 | 3.85e-01 | 83.1% | 57.0% |
| 4928895 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.60 | 48.0 | 3.28e-01 | 88.7% | 32.8% |
| 5012791 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.59 | 47.0 | 3.80e-01 | 90.1% | 68.7% |
| 3243571 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.59 | 43.0 | 3.18e-01 | 77.5% | 72.1% |
| 3518947 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.58 | 42.0 | 3.61e-01 | 78.9% | 75.8% |
| 4946001 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.57 | 48.0 | 3.15e-01 | 100.0% | 50.4% |
| 3338677 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.57 | 50.0 | 3.25e-01 | 100.0% | 65.8% |
| 5015372 | 243.6.1.0 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain | 0.56 | 40.0 | 4.22e-01 | 83.1% | 83.1% |
| None | — | 0.55 | 37.0 | 2.20e-01 | 83.1% | 8.2% | |
| 5051212 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.55 | 36.0 | 3.42e-01 | 81.7% | 53.3% |
| 3517650 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.54 | 41.0 | 3.77e-01 | 83.1% | 90.0% |
| 3239128 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 3.06e-01 | 100.0% | 51.5% |
| 5071037 | 2004.1.1.1221 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27431 | 0.54 | 35.0 | 2.15e-01 | 83.1% | 8.2% |
| 4214695 | 506.2.1.0 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain | 0.54 | 36.0 | 2.12e-01 | 83.1% | 7.4% |
| 2539927 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.53 | 38.0 | 3.51e-01 | 81.7% | 57.6% |
| 3730696 | 1.1.1.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › acid protease › Pol_BBD | 0.53 | 42.0 | 3.46e-01 | 84.5% | 93.6% |
| 4355011 | 506.2.1.0 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain | 0.53 | 36.0 | 2.11e-01 | 83.1% | 7.5% |
| 4631930 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.53 | 41.0 | 3.50e-01 | 87.3% | 91.5% |
| 4293142 | 2004.1.1.554 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter | 0.53 | 36.0 | 2.36e-01 | 83.1% | 14.4% |
| 3937722 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 40.0 | 3.43e-01 | 84.5% | 95.8% |
| 5001934 | 2004.1.1.554 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter | 0.52 | 36.0 | 2.26e-01 | 80.3% | 12.4% |
| 3965920 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.52 | 36.0 | 3.41e-01 | 83.1% | 57.8% |
| 3387556 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.52 | 37.0 | 3.46e-01 | 83.1% | 58.9% |
| 3536906 | 5.1.3.9 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › OLF | 0.52 | 44.0 | 2.99e-01 | 97.2% | 42.8% |
| 4489808 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.52 | 36.0 | 3.48e-01 | 83.1% | 61.2% |
| 4367085 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 39.0 | 3.73e-01 | 81.7% | 70.6% |
| 4524863 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.52 | 35.0 | 3.26e-01 | 83.1% | 52.6% |
| 4135015 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.52 | 34.0 | 3.26e-01 | 83.1% | 54.4% |
| 4405609 | 506.2.1.2 ↗ | beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter | 0.51 | 36.0 | 3.39e-01 | 83.1% | 58.9% |
D2
high
residues 121-218
Domain cluster:
rep: MN871446.1__UKS71963.1__KpLz245_0970__00097__D488-572
D3
high
residues 234-377
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.60 | 36.0 | 4.49e-01 | 81.9% | 100.0% |
| 4v15A01 | 2.40.37.20 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain | 0.56 | 39.0 | 3.91e-01 | 81.2% | 68.8% |
| 1dunA00 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.54 | 37.0 | 4.06e-01 | 88.9% | 84.2% |
| 2oezA01 | 2.60.440.10 | Mainly Beta › Sandwich › YacF-like › YacF-like domains | 0.52 | 27.0 | 3.35e-01 | 79.9% | 85.9% |
| 3zn6A02 | 2.60.40.3410 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 32.0 | 3.86e-01 | 79.9% | 100.0% |
| 4mtmA01 | 2.60.40.3940 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 31.0 | 3.59e-01 | 82.6% | 88.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4026674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.74 | 41.0 | 5.50e-01 | 84.0% | 100.0% |
| 5072694 | 1.1.15.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK | 0.59 | 35.0 | 4.39e-01 | 77.8% | 98.8% |
| 3214876 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 31.0 | 3.65e-01 | 79.9% | 80.0% |
| 4437403 | 4287.1.1.1 ↗ | beta sandwiches › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › beta sandwich domain in YacF-like proteins › ZapD | 0.51 | 28.0 | 3.60e-01 | 92.4% | 100.0% |