←Back to structures

OP596612.1__WAX24272.1__X__00019

Bact-Vir

OP596612.1__WAX24272.1__X__00019

Identity

Accession:
OP596612 ↗
Kingdom:
phage

Quality

96.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bradyrhizobium_phage_ppBdUSDA122-1

TaxID: 3003362

Cluster

View cluster (63 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 96-182
PDB
Domain cluster: rep: RifSed_csp2_10ft_3_scaffold_6_prodigal-single.1__X__X__00512__D461-533
CATH (34)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3okxB00 2.40.30.70 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like 0.73 64.0 5.28e-01 94.3% 85.2%
2v31A01 2.40.30.180 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain 0.69 60.0 5.82e-01 98.9% 85.6%
5eanA01 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.69 58.0 5.41e-01 92.0% 93.5%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.69 61.0 5.33e-01 97.7% 71.8%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.68 59.0 6.00e-01 96.6% 100.0%
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.68 59.0 5.65e-01 94.3% 100.0%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 49.0 4.93e-01 97.7% 75.6%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 51.0 5.49e-01 98.9% 98.6%
1vq8B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.66 60.0 5.12e-01 100.0% 89.8%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 50.0 4.98e-01 83.9% 84.8%
3p26B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 57.0 5.41e-01 96.6% 92.1%
1ep3B01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.64 56.0 5.37e-01 97.7% 99.0%
1a1rA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 45.0 4.58e-01 78.2% 76.5%
2xzlA02 2.40.30.230 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.63 52.0 5.43e-01 93.1% 100.0%
7syvx01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.63 55.0 4.75e-01 97.7% 72.3%
2gpjA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.62 55.0 5.26e-01 98.9% 100.0%
4g6iC02 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.61 55.0 5.35e-01 100.0% 94.7%
1ts9A00 2.30.30.210 Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 0.60 42.0 4.11e-01 98.9% 65.3%
7oo1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.60 42.0 4.41e-01 83.9% 83.1%
1tvcA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.58 50.0 4.69e-01 97.7% 91.7%
4ac9C04 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.58 46.0 4.77e-01 96.6% 96.2%
2ra1A04 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 46.0 4.47e-01 87.4% 77.3%
3ne5C02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.57 50.0 4.77e-01 100.0% 95.1%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.57 42.0 4.46e-01 79.3% 94.8%
2n01B00 2.60.40.2500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 41.0 3.91e-01 89.7% 67.0%
4kx7A01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.55 43.0 3.36e-01 100.0% 35.6%
2ox7A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.54 36.0 4.05e-01 70.1% 97.1%
5yzzC00 2.40.330.10 Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain 0.54 45.0 4.28e-01 98.9% 86.5%
4j27A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 38.0 3.87e-01 100.0% 76.4%
4v15A01 2.40.37.20 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › D-serine dehydratase-like domain 0.53 45.0 3.87e-01 97.7% 64.6%
4illB01 2.40.30.310 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 37.0 3.47e-01 75.9% 82.8%
2b78A01 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.52 36.0 3.91e-01 77.0% 95.5%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.91e-01 100.0% 95.6%
3ne5B01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.51 42.0 4.24e-01 93.1% 91.9%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4026674 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.81 68.0 7.13e-01 98.9% 98.8%
3332862 1.1.7.35 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.76 66.0 6.44e-01 94.3% 85.3%
3973332 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.75 59.0 6.29e-01 98.9% 97.3%
3597282 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.75 62.0 6.50e-01 97.7% 98.8%
5078307 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.74 60.0 6.44e-01 93.1% 100.0%
3617006 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.70 60.0 5.55e-01 93.1% 92.7%
1954233 11.21.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.70 62.0 6.23e-01 96.6% 97.8%
4627066 1.1.7.44 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Dna2_Rift 0.69 61.0 5.59e-01 97.7% 93.9%
3571974 1.1.7.44 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Dna2_Rift 0.69 62.0 5.61e-01 97.7% 92.2%
3964292 1.1.13.38 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 0.69 60.0 5.52e-01 100.0% 75.5%
4939996 1.1.7.46 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B 0.69 60.0 5.64e-01 95.4% 98.1%
3602819 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 59.0 5.75e-01 93.1% 97.9%
3574784 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 61.0 5.66e-01 97.7% 80.9%
3575535 1.1.7.113 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 0.68 61.0 3.81e-01 98.9% 45.8%
1714452 11.21.1.1 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein › TSP_Ig-like 0.68 61.0 6.17e-01 97.7% 97.7%
3927951 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.68 60.0 5.60e-01 96.6% 82.9%
3292420 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.68 50.0 5.02e-01 98.9% 76.7%
4854958 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.67 50.0 4.88e-01 98.9% 71.9%
4316004 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 50.0 5.12e-01 98.9% 81.2%
3273490 1.1.7.46 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B 0.67 59.0 5.26e-01 95.4% 84.2%
4204303 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 50.0 5.03e-01 97.7% 77.8%
3355171 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 57.0 5.16e-01 94.3% 99.2%
3387360 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 52.0 5.31e-01 97.7% 87.1%
4931402 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 59.0 5.46e-01 97.7% 99.1%
3369214 1.1.7.46 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SMUBP-2_HCS1_1B 0.66 58.0 5.34e-01 95.4% 82.7%
3268887 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 57.0 5.48e-01 94.3% 89.0%
4083044 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.66 52.0 5.51e-01 97.7% 100.0%
4010630 2004.1.1.10 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.66 53.0 3.42e-01 100.0% 17.9%
3226149 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 58.0 5.32e-01 97.7% 94.8%
4230122 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.65 51.0 4.91e-01 97.7% 74.0%
5076995 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.65 51.0 5.29e-01 98.9% 93.8%
3596642 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 53.0 5.35e-01 97.7% 90.6%
3967745 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 51.0 5.43e-01 97.7% 100.0%
3975044 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 50.0 5.30e-01 97.7% 97.3%
4085589 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 53.0 5.52e-01 98.9% 100.0%
4319764 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.64 51.0 4.78e-01 98.9% 69.1%
3397088 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 57.0 5.17e-01 97.7% 99.1%
4429352 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 52.0 5.19e-01 98.9% 87.8%
4854964 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.63 51.0 5.14e-01 97.7% 90.7%
5023390 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 54.0 5.23e-01 96.6% 97.0%
4231688 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 51.0 4.92e-01 89.7% 97.0%
4372074 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.62 54.0 4.62e-01 96.6% 73.6%
1790393 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 51.0 5.29e-01 100.0% 96.3%
5033242 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.62 44.0 4.44e-01 96.6% 74.1%
4173804 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 54.0 5.37e-01 96.6% 100.0%
3987460 1.1.7.89 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 0.62 53.0 4.97e-01 96.6% 97.3%
3415428 1.1.7.69 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MOV-10_beta-barrel 0.62 54.0 5.11e-01 97.7% 87.6%
3255732 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.61 53.0 5.21e-01 97.7% 100.0%
4943168 1.1.7.144 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11 0.61 53.0 5.13e-01 93.1% 97.9%
4253108 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.60 42.0 4.25e-01 98.9% 72.7%
4947175 4.7.1.0 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 0.60 42.0 4.17e-01 97.7% 70.0%
5038850 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.60 42.0 4.19e-01 97.7% 71.1%
4883586 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 48.0 4.86e-01 96.6% 89.5%
5005903 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.59 42.0 4.03e-01 98.9% 64.0%
4668815 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.59 42.0 4.08e-01 98.9% 67.4%
4098870 4.7.1.1 ↗ beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.59 42.0 4.16e-01 98.9% 69.5%
5075955 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 48.0 4.84e-01 93.1% 97.8%
3721973 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 46.0 4.93e-01 88.5% 98.7%
3172185 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 51.0 4.75e-01 98.9% 84.5%
3280514 1.1.7.32 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › D-ser_dehydrat 0.58 49.0 4.15e-01 96.6% 70.3%
3717225 221.1.1.0 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.57 48.0 4.67e-01 95.4% 89.0%
3603040 301.7.1.0 ↗ a+b three layers › Bacillus chorismate mutase-like › YjgF-like › YjgF-like 0.57 48.0 4.65e-01 95.4% 99.0%
3273204 11.1.1.802 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 0.56 44.0 4.38e-01 97.7% 82.1%
3845669 11.1.1.396 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig 0.55 43.0 4.26e-01 88.5% 88.4%
3283603 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 42.0 4.28e-01 94.3% 92.9%
3973699 4182.1.1.0 ↗ beta sandwiches › Agglutinin HPA-like › Agglutinin HPA-like › Agglutinin HPA-like 0.52 45.0 4.12e-01 100.0% 78.8%
3773309 11.1.1.396 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig 0.52 41.0 3.96e-01 89.7% 83.0%
4083714 11.1.5.89 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › DUF3707 0.50 42.0 3.54e-01 97.7% 89.1%
4107101 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.50 44.0 4.29e-01 100.0% 94.7%
D2 medium residues 14-40_66-90_186-215
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6fezA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 38.0 3.74e-01 100.0% 63.8%
3bvxA03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.51 39.0 3.26e-01 82.9% 78.2%
3wbiA04 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 41.0 3.47e-01 92.7% 55.9%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3993677 823.1.1.0 ↗ a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW 0.58 35.0 3.78e-01 78.0% 71.4%
3443252 263.1.1.0 ↗ a+b three layers › SRF-like › SRF-like › SRF-like 0.56 29.0 3.69e-01 72.0% 91.1%
2083577 3019.1.1.1 ↗ beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › Flagellin_IN 0.55 32.0 2.80e-01 79.3% 37.9%
3289101 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.53 25.0 3.07e-01 96.3% 64.0%
865573 3351.1.1.1 ↗ a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 › ATG7_N 0.52 42.0 3.53e-01 91.5% 88.0%
4231372 4.1.1.307 ↗ beta barrels › SH3 › SH3 › SH3 › PF26132 0.50 37.0 3.96e-01 79.3% 92.9%
D3 medium residues 216-408
PDB
Domain cluster: rep: KX365748.1__ANY29585.1__X__00020__D206-385
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18906.6 best Phage_tube_2 43.7 3.60e-11 97.9% 53.8%
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.69 52.0 5.68e-01 77.2% 92.6%
1y12B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.68 49.0 5.40e-01 96.9% 90.4%
4hkhA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.67 48.0 5.43e-01 77.2% 94.0%
4w64B00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.66 47.0 5.16e-01 76.2% 87.5%
2hhzA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 38.0 4.45e-01 100.0% 89.1%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 37.0 4.34e-01 99.5% 92.7%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 38.0 4.25e-01 100.0% 88.6%
2cduA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.55 22.0 2.82e-01 95.9% 61.1%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.55 35.0 3.74e-01 76.2% 71.8%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 27.0 3.00e-01 100.0% 59.9%
4binA01 2.60.40.3500 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 26.0 3.36e-01 71.0% 84.5%
ECOD (36)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929634 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.85 71.0 6.18e-01 97.4% 60.7%
5078836 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.85 48.0 6.47e-01 75.1% 100.0%
4140243 1.1.5.82 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 0.82 49.0 6.38e-01 77.2% 100.0%
4954552 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.81 61.0 6.71e-01 76.7% 100.0%
4873215 1.1.13.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.81 58.0 6.77e-01 79.8% 100.0%
2832217 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.80 58.0 6.68e-01 79.3% 100.0%
5003885 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.79 57.0 6.59e-01 79.3% 97.9%
2642579 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.79 52.0 6.36e-01 76.2% 100.0%
4514734 1.1.13.42 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube 0.79 45.0 5.93e-01 92.2% 100.0%
3058416 1.1.5.39 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › TssD 0.78 48.0 5.88e-01 95.3% 92.9%
5080512 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.77 70.0 5.69e-01 98.4% 54.8%
2471637 1.1.5.24 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.77 58.0 6.58e-01 79.8% 100.0%
3942090 1.1.5.77 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube 0.76 53.0 5.72e-01 77.7% 83.0%
4888726 1.1.13.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 0.75 54.0 5.91e-01 77.2% 87.2%
3964955 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 55.0 6.01e-01 75.1% 100.0%
4957560 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.74 49.0 5.96e-01 95.9% 100.0%
3581358 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.74 57.0 6.35e-01 80.3% 98.7%
3502370 1.1.5.47 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.71 54.0 5.95e-01 96.4% 94.4%
4057590 1.1.5.86 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN3 0.70 42.0 4.81e-01 98.4% 80.0%
3969384 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 52.0 5.72e-01 77.2% 93.8%
136185 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.69 52.0 5.68e-01 77.2% 92.6%
3590380 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.69 52.0 5.43e-01 78.2% 89.4%
3943316 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.69 54.0 5.86e-01 99.0% 96.9%
4878666 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.68 46.0 5.36e-01 76.7% 94.2%
4929752 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.68 49.0 5.48e-01 76.7% 92.3%
2387782 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.66 50.0 5.33e-01 76.7% 89.3%
4009489 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.66 48.0 5.35e-01 96.9% 92.3%
1563850 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.66 47.0 5.15e-01 96.9% 87.5%
3265120 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 48.0 5.04e-01 77.2% 91.4%
4030848 1.1.13.52 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_1 0.62 47.0 5.07e-01 76.7% 93.9%
3264744 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.62 47.0 4.92e-01 77.2% 91.4%
3264455 5084.1.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like 0.59 29.0 3.22e-01 98.4% 54.8%
4949945 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.59 39.0 4.65e-01 99.5% 98.5%
5021621 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.58 40.0 4.64e-01 100.0% 97.8%
5064875 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.56 38.0 4.27e-01 100.0% 88.7%
4989982 244.2.1.1 ↗ a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Pyr_redox_dim 0.55 20.0 2.47e-01 88.6% 48.8%