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OP596613.1__WAX24315.1__X__00002
Bact-VirOP596613.1__WAX24315.1__X__00002
Identity
- Accession:
- OP596613 ↗
- Kingdom:
- phage
Quality
74.4
mean pLDDT
Taxonomy
TaxID: 3003363
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-83
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3uo2B02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.74 | 50.0 | 4.49e-01 | 71.2% | 52.4% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.71 | 55.0 | 5.09e-01 | 83.1% | 98.6% |
| 8b6jF01 | 1.10.287.20 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Ubiquinol-cytochrome C reductase hinge domain | 0.66 | 56.0 | 5.45e-01 | 98.3% | 92.5% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 55.0 | 4.83e-01 | 93.2% | 64.4% |
| 1bgfA00 | 1.10.532.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor, Stat-4 › STAT transcription factor, N-terminal domain | 0.65 | 52.0 | 4.11e-01 | 88.1% | 42.7% |
| 4dylA02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.65 | 48.0 | 4.21e-01 | 81.4% | 56.4% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 56.0 | 4.36e-01 | 100.0% | 76.9% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.64 | 47.0 | 4.22e-01 | 83.1% | 54.0% |
| 3vkgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.62 | 53.0 | 3.90e-01 | 96.6% | 43.1% |
| 2vkzA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.61 | 50.0 | 3.28e-01 | 91.5% | 81.3% |
| 2e9xA01 | 1.20.58.1030 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 42.0 | 3.41e-01 | 78.0% | 37.5% |
| 2ah5A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 46.0 | 4.47e-01 | 84.7% | 100.0% |
| 1yt3A02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.59 | 51.0 | 4.39e-01 | 100.0% | 81.8% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 42.0 | 3.97e-01 | 81.4% | 59.0% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 48.0 | 4.33e-01 | 96.6% | 68.2% |
| 3owaA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.57 | 45.0 | 3.43e-01 | 96.6% | 78.9% |
| 1rp3A01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.56 | 47.0 | 4.17e-01 | 93.2% | 63.5% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 43.0 | 3.51e-01 | 88.1% | 58.9% |
| 8dtqA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 45.0 | 4.17e-01 | 96.6% | 100.0% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 45.0 | 3.53e-01 | 91.5% | 75.6% |
| 3ccfA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 46.0 | 3.11e-01 | 93.2% | 92.4% |
| 4yg1A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 40.0 | 3.81e-01 | 79.7% | 87.5% |
| 2ahoB02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.54 | 39.0 | 3.51e-01 | 81.4% | 52.7% |
| 2a6cA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.53 | 43.0 | 3.94e-01 | 88.1% | 84.2% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3707377 | 604.12.1.73 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › PF27107 | 0.69 | 51.0 | 3.98e-01 | 79.7% | 87.2% |
| 3389693 | 192.1.1.0 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain | 0.68 | 49.0 | 3.80e-01 | 76.3% | 34.8% |
| 5060023 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.67 | 48.0 | 4.59e-01 | 76.3% | 71.4% |
| 5058628 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.67 | 55.0 | 5.22e-01 | 91.5% | 82.9% |
| 3260134 | 622.4.1.61 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › Mit_KHE1 | 0.66 | 48.0 | 3.62e-01 | 78.0% | 34.5% |
| 4393704 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 49.0 | 2.88e-01 | 79.7% | 10.3% |
| 4983596 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.65 | 47.0 | 4.66e-01 | 79.7% | 78.5% |
| 5069175 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.65 | 50.0 | 4.57e-01 | 84.7% | 65.0% |
| 5059485 | 7076.1.1.0 ↗ | 0.65 | 45.0 | 4.62e-01 | 72.9% | 85.5% | |
| 5061325 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.65 | 47.0 | 4.63e-01 | 79.7% | 78.5% |
| 3686641 | 551.1.1.0 ↗ | alpha arrays › Hsp90 co-chaperone CDC37 middle domain › Hsp90 co-chaperone CDC37 middle domain › Hsp90 co-chaperone CDC37 middle domain | 0.65 | 56.0 | 4.62e-01 | 100.0% | 54.5% |
| 5059279 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.65 | 50.0 | 4.60e-01 | 86.4% | 68.8% |
| 5070510 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.64 | 50.0 | 4.59e-01 | 86.4% | 67.5% |
| 4036502 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.64 | 53.0 | 3.47e-01 | 93.2% | 97.0% |
| 3641527 | 192.8.1.353 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Med10 | 0.64 | 47.0 | 4.29e-01 | 78.0% | 60.0% |
| 5061726 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.64 | 49.0 | 4.72e-01 | 86.4% | 82.9% |
| 5029713 | 109.59.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Intraflagellar transport protein 80 (IFT80) C-terminal domain › Intraflagellar transport protein 80 (IFT80) C-terminal domain | 0.64 | 50.0 | 4.20e-01 | 84.7% | 87.0% |
| 3788506 | 6155.1.1.2 ↗ | alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop | 0.64 | 48.0 | 3.68e-01 | 84.7% | 34.7% |
| 4981748 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.64 | 51.0 | 4.78e-01 | 91.5% | 78.7% |
| 5078040 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.64 | 50.0 | 4.56e-01 | 98.3% | 63.5% |
| 5060653 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.64 | 50.0 | 4.90e-01 | 86.4% | 80.0% |
| 4981741 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.64 | 49.0 | 4.93e-01 | 84.7% | 86.7% |
| 5062727 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.63 | 52.0 | 4.96e-01 | 93.2% | 81.4% |
| 5061334 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.63 | 49.0 | 4.51e-01 | 88.1% | 70.0% |
| 5070000 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.63 | 43.0 | 4.24e-01 | 72.9% | 72.3% |
| 5068216 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.62 | 43.0 | 4.36e-01 | 74.6% | 80.0% |
| 4982048 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.61 | 50.0 | 4.60e-01 | 93.2% | 71.2% |
| 5060144 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.60 | 50.0 | 4.81e-01 | 94.9% | 80.0% |
| 5069090 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.60 | 41.0 | 4.10e-01 | 71.2% | 76.7% |
| 4943532 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.60 | 44.0 | 4.27e-01 | 83.1% | 71.4% |
| 3237761 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.60 | 44.0 | 3.77e-01 | 81.4% | 47.0% |
| 4114191 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.59 | 43.0 | 3.69e-01 | 83.1% | 79.0% |
| 3794663 | 604.3.1.27 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › EMC4 | 0.58 | 44.0 | 3.80e-01 | 84.7% | 55.0% |
| 5026085 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.58 | 48.0 | 4.04e-01 | 94.9% | 51.9% |
| 3566658 | 2006.1.4.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › Tim17 | 0.58 | 48.0 | 4.51e-01 | 96.6% | 92.0% |
| 3958088 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.58 | 42.0 | 2.93e-01 | 76.3% | 23.9% |
| 3615521 | 301.6.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › Tubulin C-terminal domain-like › Tubulin C-terminal domain-like › Tubulin_C | 0.57 | 44.0 | 3.09e-01 | 84.7% | 26.5% |
| 4981035 | 5058.1.1.16 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 | 0.56 | 46.0 | 4.56e-01 | 98.3% | 89.2% |
| 3217001 | 109.12.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal domain of Ku80 › C-terminal domain of Ku80 › MAS20 | 0.56 | 42.0 | 3.90e-01 | 89.8% | 100.0% |
| 3213565 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.52 | 36.0 | 3.42e-01 | 91.5% | 58.7% |
| 3241997 | 197.1.1.8 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › PF26570 | 0.50 | 38.0 | 3.53e-01 | 84.7% | 97.5% |