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OP596613.1__WAX24357.1__X__00044
Bact-VirOP596613.1__WAX24357.1__X__00044
Identity
- Accession:
- OP596613 ↗
- Kingdom:
- phage
Quality
89.6
mean pLDDT
Taxonomy
TaxID: 3003363
Cluster
View cluster (31 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-136
Domain cluster:
rep: IMGVR_UViG_3300005099_000002-3300005099-Ga0072682_1005676__D4-125
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.69 | 43.0 | 4.44e-01 | 100.0% | 65.6% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.67 | 44.0 | 5.07e-01 | 100.0% | 92.6% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.66 | 37.0 | 4.16e-01 | 99.3% | 70.2% |
| 2q83B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 34.0 | 3.91e-01 | 93.3% | 69.7% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.63 | 36.0 | 2.73e-01 | 94.8% | 24.2% |
| 2x7fC01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 35.0 | 4.10e-01 | 97.0% | 77.7% |
| 3i1aA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 34.0 | 3.81e-01 | 94.0% | 69.9% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 34.0 | 4.03e-01 | 97.0% | 81.6% |
| 1u5qA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 34.0 | 3.89e-01 | 97.0% | 74.0% |
| 4b9dB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 32.0 | 3.74e-01 | 93.3% | 72.0% |
| 3uc4A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 31.0 | 3.80e-01 | 94.0% | 76.5% |
| 1k8kD01 | 3.30.1460.20 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 37.0 | 3.56e-01 | 93.3% | 55.0% |
| 3n9xA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 35.0 | 3.36e-01 | 97.0% | 49.4% |
| 4h05B01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 31.0 | 3.70e-01 | 92.5% | 73.6% |
| 2rc5B01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 42.0 | 4.22e-01 | 99.3% | 71.4% |
| 3tu3A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 29.0 | 3.12e-01 | 91.0% | 52.1% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 33.0 | 3.70e-01 | 86.6% | 72.1% |
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 30.0 | 3.07e-01 | 93.3% | 49.2% |
| 6ue9L02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 32.0 | 3.38e-01 | 92.5% | 59.0% |
| 3jr1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 30.0 | 3.36e-01 | 96.3% | 65.7% |
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.56 | 32.0 | 3.58e-01 | 100.0% | 71.4% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 33.0 | 3.62e-01 | 94.0% | 72.2% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.55 | 40.0 | 4.19e-01 | 99.3% | 83.2% |
| 1xkpB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.55 | 33.0 | 3.45e-01 | 94.8% | 64.5% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 32.0 | 3.54e-01 | 90.3% | 72.0% |
| 3kmuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 29.0 | 3.47e-01 | 92.5% | 78.2% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 26.0 | 3.04e-01 | 71.6% | 62.0% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 4.07e-01 | 99.3% | 74.8% |
| 1ry9A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.53 | 29.0 | 2.95e-01 | 94.8% | 50.4% |
| 3ko2A00 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.53 | 33.0 | 3.11e-01 | 100.0% | 50.3% |
| 4btfA03 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 30.0 | 3.24e-01 | 93.3% | 65.2% |
| 2xcmC00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 30.0 | 3.56e-01 | 97.0% | 85.9% |
| 1s9iB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 28.0 | 3.21e-01 | 93.3% | 74.2% |
| 3ikwA02 | 3.10.540.20 | Alpha Beta › Roll › duf1285 like fold › | 0.50 | 24.0 | 3.29e-01 | 78.4% | 88.6% |
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.50 | 38.0 | 3.75e-01 | 92.5% | 74.8% |
| 1k8wA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.50 | 41.0 | 3.48e-01 | 91.0% | 53.5% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.79 | 58.0 | 6.50e-01 | 98.5% | 97.1% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.75 | 57.0 | 6.27e-01 | 100.0% | 95.5% |
| 3969448 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 56.0 | 6.28e-01 | 99.3% | 99.0% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.69 | 42.0 | 4.41e-01 | 100.0% | 65.8% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 48.0 | 4.97e-01 | 100.0% | 76.8% |
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.68 | 55.0 | 5.57e-01 | 100.0% | 85.9% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.65 | 53.0 | 5.27e-01 | 100.0% | 82.9% |
| 4562028 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.62 | 44.0 | 4.30e-01 | 100.0% | 66.9% |
| 5003885 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.61 | 51.0 | 5.05e-01 | 100.0% | 84.1% |
| 2471641 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.61 | 51.0 | 4.95e-01 | 100.0% | 81.2% |
| 2832216 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.61 | 55.0 | 5.27e-01 | 100.0% | 86.9% |
| 3942828 | 1.1.13.39 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › KPP10_Orf10 | 0.61 | 52.0 | 5.08e-01 | 100.0% | 86.2% |
| 5062396 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 56.0 | 5.58e-01 | 100.0% | 97.1% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.60 | 52.0 | 5.10e-01 | 100.0% | 85.9% |
| 3502370 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.59 | 53.0 | 5.07e-01 | 100.0% | 85.0% |
| 3177162 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 36.0 | 3.94e-01 | 95.5% | 74.5% |
| 1229917 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.58 | 34.0 | 3.21e-01 | 94.0% | 46.9% |
| 3964955 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.58 | 52.0 | 4.97e-01 | 100.0% | 93.1% |
| 149453 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.58 | 29.0 | 3.09e-01 | 91.0% | 51.2% |
| 3570520 | 306.10.1.4 ↗ | a+b two layers › Glucose permease domain IIB-like › H1 domain of KCTD12 › H1 domain of KCTD12 › KCTD11_21_C | 0.56 | 34.0 | 3.35e-01 | 95.5% | 55.2% |
| 3179676 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 36.0 | 2.69e-01 | 94.0% | 25.6% |
| 4064881 | 241.1.1.7 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Type_III_SycN | 0.55 | 33.0 | 3.42e-01 | 94.8% | 63.4% |
| 3971872 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.54 | 32.0 | 3.37e-01 | 94.0% | 62.6% |
| 3285688 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.51 | 26.0 | 3.00e-01 | 98.5% | 65.3% |
| 4638008 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.51 | 36.0 | 3.83e-01 | 73.1% | 97.5% |
| 4966226 | 512.1.1.2 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd | 0.51 | 28.0 | 3.02e-01 | 99.3% | 62.7% |
| 4617847 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.50 | 41.0 | 3.53e-01 | 91.0% | 57.0% |