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OP596614.1__WAX24428.1__X__00055
Bact-VirOP596614.1__WAX24428.1__X__00055
Identity
- Accession:
- OP596614 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Taxonomy
TaxID: 3003364
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-50
Domain cluster:
rep: OM654376.2__UNY40285.1__KLEP181_gp22__00022__D3-48
D2
medium
residues 57-138
Domain cluster:
rep: MW824397.1__QZI91684.1__PODOV088v1_p0023__00023__D41-137
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3bzcA05 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 50.0 | 4.76e-01 | 85.4% | 83.3% |
| 1k3rA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 42.0 | 4.71e-01 | 82.9% | 96.6% |
| 4m37A02 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.62 | 55.0 | 4.37e-01 | 100.0% | 95.9% |
| 2ba0A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 46.0 | 4.60e-01 | 85.4% | 87.4% |
| 2je6I02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 46.0 | 4.55e-01 | 85.4% | 88.6% |
| 2k52A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 45.0 | 4.71e-01 | 84.1% | 94.6% |
| 5lm7A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 44.0 | 4.56e-01 | 82.9% | 93.6% |
| 1kl9A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 44.0 | 4.54e-01 | 89.0% | 93.3% |
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 37.0 | 4.08e-01 | 74.4% | 90.2% |
| 2lssA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 39.0 | 4.17e-01 | 74.4% | 95.7% |
| 2l55A00 | 2.40.50.320 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Copper binding periplasmic protein CusF | 0.55 | 40.0 | 4.06e-01 | 78.0% | 86.6% |
| 4c3iG02 | 2.40.50.1060 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 38.0 | 3.23e-01 | 72.0% | 57.6% |
| 6o38A02 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 49.0 | 4.71e-01 | 100.0% | 93.5% |
| 6jn7A01 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.53 | 43.0 | 3.49e-01 | 92.7% | 69.1% |
| 3trzA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 38.0 | 3.79e-01 | 76.8% | 86.2% |
| 3nswA00 | 2.40.50.780 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 37.0 | 3.45e-01 | 74.4% | 65.1% |
| 2khiA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 39.0 | 3.74e-01 | 79.3% | 80.0% |
| 5zveA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.52 | 41.0 | 4.09e-01 | 92.7% | 84.9% |
| 6o38A01 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 4.44e-01 | 100.0% | 94.6% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 43.0 | 4.13e-01 | 93.9% | 89.2% |
| 6o38A04 | 2.60.120.1230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 42.0 | 4.16e-01 | 100.0% | 86.5% |
| 1a3qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.64e-01 | 91.5% | 69.4% |
| 1f35A00 | 2.60.120.390 | Mainly Beta › Sandwich › Jelly Rolls › Olfactory marker | 0.50 | 42.0 | 3.47e-01 | 96.3% | 90.7% |
| 1sqwA02 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.50 | 40.0 | 4.03e-01 | 91.5% | 96.4% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5043072 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 46.0 | 4.88e-01 | 87.8% | 88.6% |
| 3965356 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.63 | 51.0 | 4.86e-01 | 90.2% | 84.0% |
| 4053036 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.62 | 48.0 | 4.59e-01 | 82.9% | 82.1% |
| 3244964 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 49.0 | 4.85e-01 | 87.8% | 92.2% |
| 3899847 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 49.0 | 4.61e-01 | 87.8% | 85.0% |
| 3854800 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.61 | 50.0 | 4.90e-01 | 90.2% | 96.7% |
| 3253114 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.61 | 46.0 | 4.64e-01 | 82.9% | 91.8% |
| 24072 | 2.1.1.109 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 | 0.61 | 48.0 | 4.72e-01 | 85.4% | 89.8% |
| 3253124 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.61 | 47.0 | 4.31e-01 | 84.1% | 96.4% |
| 4964989 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 48.0 | 4.45e-01 | 87.8% | 70.9% |
| 5042600 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 47.0 | 4.68e-01 | 84.1% | 90.6% |
| 5043225 | 2.1.1.107 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 | 0.61 | 47.0 | 4.74e-01 | 85.4% | 89.4% |
| 3808583 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 43.0 | 4.25e-01 | 75.6% | 77.8% |
| 3195732 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 46.0 | 4.72e-01 | 82.9% | 96.2% |
| 3383363 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.61 | 46.0 | 4.54e-01 | 82.9% | 100.0% |
| 1487336 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.61 | 46.0 | 3.69e-01 | 81.7% | 44.5% |
| 3168199 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 48.0 | 4.70e-01 | 87.8% | 94.4% |
| 3694745 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 47.0 | 4.61e-01 | 85.4% | 87.8% |
| 3930534 | 2.1.1.246 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29071 | 0.60 | 46.0 | 4.45e-01 | 82.9% | 91.6% |
| 3986747 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 46.0 | 4.17e-01 | 82.9% | 67.8% |
| 4588738 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 44.0 | 4.36e-01 | 76.8% | 97.6% |
| 5024136 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 47.0 | 4.08e-01 | 87.8% | 58.5% |
| 3403113 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 45.0 | 4.31e-01 | 82.9% | 94.0% |
| 4090273 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 44.0 | 4.13e-01 | 79.3% | 68.3% |
| 3514142 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 47.0 | 4.73e-01 | 86.6% | 92.9% |
| 5066609 | 2.1.1.109 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 | 0.60 | 47.0 | 4.56e-01 | 85.4% | 87.8% |
| 3997691 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.60 | 47.0 | 4.67e-01 | 85.4% | 92.9% |
| 4017905 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.60 | 45.0 | 4.50e-01 | 81.7% | 100.0% |
| 3899838 | 2.1.1.226 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29086 | 0.59 | 46.0 | 4.26e-01 | 84.1% | 87.6% |
| 4218294 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.59 | 46.0 | 4.50e-01 | 84.1% | 82.2% |
| 3485666 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.59 | 47.0 | 4.61e-01 | 87.8% | 90.0% |
| 3195689 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.59 | 46.0 | 4.42e-01 | 84.1% | 85.3% |
| 4458583 | 2.1.1.109 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP4_S1 | 0.59 | 46.0 | 4.54e-01 | 85.4% | 90.0% |
| 4232512 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.59 | 42.0 | 4.25e-01 | 75.6% | 83.1% |
| 3744260 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.59 | 47.0 | 4.70e-01 | 87.8% | 96.5% |
| 4932295 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 46.0 | 4.59e-01 | 85.4% | 89.4% |
| 2055510 | 885.1.1.0 ↗ | a+b complex topology › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain › Transcription factor NusA, N-terminal domain | 0.59 | 44.0 | 4.22e-01 | 80.5% | 75.3% |
| 4240224 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.59 | 45.0 | 4.63e-01 | 84.1% | 92.5% |
| 3309420 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.59 | 47.0 | 4.65e-01 | 87.8% | 92.9% |
| 4682066 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.59 | 45.0 | 4.38e-01 | 84.1% | 79.6% |
| 3627655 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.59 | 46.0 | 4.50e-01 | 86.6% | 88.9% |
| 4553088 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 42.0 | 4.61e-01 | 80.5% | 96.9% |
| 3303516 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.58 | 45.0 | 4.38e-01 | 85.4% | 81.1% |
| 4380179 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.58 | 41.0 | 3.95e-01 | 74.4% | 85.3% |
| 5030021 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 44.0 | 4.67e-01 | 85.4% | 97.1% |
| 3403141 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.58 | 46.0 | 4.74e-01 | 87.8% | 94.7% |
| 3785800 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 50.0 | 3.77e-01 | 100.0% | 72.3% |
| 4536756 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.58 | 45.0 | 4.49e-01 | 85.4% | 88.2% |
| 4185603 | 2.1.1.63 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_2 | 0.58 | 43.0 | 4.59e-01 | 80.5% | 92.9% |
| 3425319 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.58 | 41.0 | 3.74e-01 | 74.4% | 66.4% |
| 3633102 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.58 | 45.0 | 4.55e-01 | 84.1% | 95.0% |
| 3736756 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.58 | 45.0 | 4.55e-01 | 84.1% | 97.5% |
| 3435395 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.57 | 45.0 | 3.45e-01 | 87.8% | 34.6% |
| 3740007 | 2.1.1.177 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1_RRP5 | 0.57 | 45.0 | 4.65e-01 | 84.1% | 98.7% |
| 3938425 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 45.0 | 4.37e-01 | 87.8% | 78.9% |
| 3311698 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 44.0 | 4.64e-01 | 86.6% | 94.6% |
| 4654223 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.57 | 41.0 | 4.11e-01 | 76.8% | 100.0% |
| 3287699 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.57 | 45.0 | 4.40e-01 | 86.6% | 85.6% |
| 5052784 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 43.0 | 4.47e-01 | 81.7% | 97.3% |
| 3514146 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 44.0 | 4.52e-01 | 86.6% | 95.0% |
| 4194546 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.57 | 45.0 | 4.53e-01 | 89.0% | 95.3% |
| 4100241 | 2.1.1.113 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CvfB_2nd | 0.57 | 48.0 | 4.81e-01 | 100.0% | 91.8% |
| 3485637 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 43.0 | 4.30e-01 | 82.9% | 91.8% |
| 3385925 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.57 | 43.0 | 4.16e-01 | 82.9% | 77.9% |
| 4353586 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 39.0 | 3.70e-01 | 74.4% | 60.0% |
| 4833024 | 2.1.1.116 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Spt6_S1 | 0.56 | 42.0 | 3.81e-01 | 82.9% | 67.2% |
| 4226320 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 44.0 | 4.26e-01 | 89.0% | 88.4% |
| 4982945 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.55 | 48.0 | 3.35e-01 | 98.8% | 99.7% |
| 3938105 | 2.1.1.253 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 | 0.55 | 42.0 | 4.43e-01 | 81.7% | 95.7% |
| 3553354 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.55 | 39.0 | 3.93e-01 | 75.6% | 85.9% |
| 4097689 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 41.0 | 4.38e-01 | 81.7% | 98.6% |
| 2581338 | 520.2.1.1 ↗ | beta sandwiches › gp9 N-terminal domain-like › beta-sandwich domain in metalloprotease stcE › beta-sandwich domain in metalloprotease stcE › StcE_b-sandwich | 0.55 | 49.0 | 4.65e-01 | 100.0% | 90.6% |
| 3275931 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.54 | 43.0 | 3.91e-01 | 87.8% | 79.1% |
| 2759388 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 38.0 | 4.03e-01 | 74.4% | 87.3% |
| 4134041 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 43.0 | 4.26e-01 | 89.0% | 98.8% |
| 3889658 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 37.0 | 4.00e-01 | 73.2% | 87.1% |
| 3514148 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 43.0 | 4.22e-01 | 87.8% | 85.6% |
| 3252917 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 42.0 | 4.37e-01 | 85.4% | 96.0% |
| 5022524 | 70.4.1.0 ↗ | beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) | 0.53 | 36.0 | 3.86e-01 | 70.7% | 88.6% |
| 3998577 | 2.1.1.253 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 | 0.53 | 39.0 | 4.32e-01 | 81.7% | 100.0% |
| 3787653 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.53 | 39.0 | 3.62e-01 | 78.0% | 88.6% |
| 4236717 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.53 | 37.0 | 3.28e-01 | 73.2% | 98.3% |
| 3907939 | 10.32.1.263 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › F5_F8_type_C, DDR1-2_DS-like | 0.50 | 41.0 | 2.79e-01 | 96.3% | 48.8% |
D3
medium
residues 156-227_316-326
Domain cluster:
rep: AY328852.1__AAQ96491.1__X__00024__D88-161
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07484.18 best | Collar | 56.9 | 2.20e-15 | 65.1% | 91.2% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ocyA01 | 3.90.1340.10 | Alpha Beta › Alpha-Beta Complex › heat- and protease-stable fragment of the bacteriophage t4 short fibre, domain 3 › Phage tail collar domain | 0.91 | 60.0 | 6.29e-01 | 100.0% | 73.7% |
| 2xgfA01 | 3.90.1340.10 | Alpha Beta › Alpha-Beta Complex › heat- and protease-stable fragment of the bacteriophage t4 short fibre, domain 3 › Phage tail collar domain | 0.86 | 48.0 | 5.76e-01 | 100.0% | 82.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1839976 | 877.1.1.3 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Collar,S_tail_recep_bd | 0.79 | 75.0 | 5.47e-01 | 100.0% | 89.9% |
| 3981712 | 877.1.1.2 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Collar | 0.68 | 62.0 | 5.05e-01 | 97.6% | 95.9% |
| 141225 | 877.1.1.1 ↗ | a+b duplicates or obligate multimers › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › gp11/gp12 receptor-binding domain › Phage_fiber,Collar | 0.68 | 63.0 | 4.53e-01 | 100.0% | 95.4% |