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OP617743.1__UYL04689.1__EBOKLHFM_00069__00069

Bact-Vir

OP617743.1__UYL04689.1__EBOKLHFM_00069__00069

Identity

Accession:
OP617743 ↗
Kingdom:
phage

Quality

69.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-56
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.82 71.0 6.06e-01 100.0% 61.0%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.80 71.0 6.17e-01 100.0% 74.7%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 68.0 6.39e-01 100.0% 78.3%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 67.0 6.40e-01 100.0% 82.1%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 68.0 6.24e-01 100.0% 82.8%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.77 67.0 6.16e-01 100.0% 90.6%
1vwxM01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 65.0 5.38e-01 100.0% 54.1%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 62.0 6.34e-01 100.0% 93.6%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 62.0 5.70e-01 100.0% 71.4%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 65.0 6.02e-01 100.0% 77.4%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 63.0 5.82e-01 100.0% 87.9%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 5.22e-01 100.0% 55.8%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 49.0 4.92e-01 77.6% 83.7%
4u6bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.68 58.0 3.50e-01 98.0% 31.8%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 57.0 5.11e-01 100.0% 66.7%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.68 48.0 3.86e-01 77.6% 76.9%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 55.0 4.51e-01 95.9% 65.6%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.66 57.0 4.11e-01 100.0% 64.1%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.66 54.0 3.33e-01 95.9% 28.1%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.66 54.0 5.24e-01 100.0% 87.9%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 50.0 4.04e-01 89.8% 58.7%
1yy3A02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.65 57.0 4.53e-01 100.0% 80.8%
1ssfA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 51.0 4.97e-01 100.0% 81.8%
4dkkA02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 49.0 4.40e-01 87.8% 74.3%
1nqnA00 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.62 50.0 3.89e-01 93.9% 50.8%
2w1zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 48.0 3.70e-01 98.0% 82.3%
1uwyA02 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.59 46.0 3.82e-01 89.8% 78.4%
2qpvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 46.0 3.45e-01 87.8% 41.7%
3bwsA01 2.60.40.3070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 45.0 3.90e-01 87.8% 82.1%
7jooC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 3.42e-01 79.6% 87.6%
2w9jA00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.58 42.0 3.95e-01 87.8% 77.5%
1egxA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 45.0 3.67e-01 100.0% 72.2%
1cpyA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.57 47.0 2.90e-01 100.0% 62.2%
5tkwA01 3.30.420.380 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.57 40.0 2.81e-01 73.5% 35.3%
6cz7A01 2.20.25.90 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains 0.57 44.0 4.19e-01 89.8% 85.5%
4h63Q04 3.90.1150.120 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.57 45.0 3.47e-01 95.9% 37.9%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 3.84e-01 100.0% 73.0%
3kbhE00 2.60.40.3130 Mainly Beta › Sandwich › Immunoglobulin-like › Coronavirus S1 glycoprotein, central receptor binding domain (RBD) 0.56 41.0 3.31e-01 81.6% 91.8%
1v5pA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 3.82e-01 100.0% 79.6%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.56 40.0 3.10e-01 81.6% 70.8%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.55 43.0 3.39e-01 100.0% 72.8%
3fehA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 45.0 3.50e-01 100.0% 62.9%
2psbA00 3.50.90.10 Alpha Beta › 3-Layer(bba) Sandwich › YerB-like fold › YerB-like 0.54 42.0 2.77e-01 98.0% 81.0%
2retA00 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.54 41.0 3.54e-01 85.7% 73.8%
2o62A01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 44.0 3.38e-01 100.0% 69.5%
5t5lA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 2.95e-01 100.0% 68.1%
2qv8A00 3.55.40.10 Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › minor pseudopilin epsh domain 0.53 40.0 3.01e-01 85.7% 67.4%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 39.0 3.36e-01 87.8% 55.4%
1qmoE01 2.60.40.4220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 38.0 3.30e-01 79.6% 83.3%
3pcrA01 3.10.450.460 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › EspG protein, N-terminal domain 0.52 41.0 3.47e-01 93.9% 95.7%
3kg6C00 3.10.129.110 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase 0.52 40.0 2.65e-01 93.9% 64.6%
3f3fD01 2.20.25.500 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.52 38.0 3.82e-01 83.7% 88.2%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.50 36.0 2.43e-01 89.8% 75.8%
ECOD (73)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3200493 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.84 68.0 6.61e-01 100.0% 80.0%
3744277 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 68.0 6.77e-01 100.0% 90.0%
3784140 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 72.0 7.00e-01 100.0% 90.9%
3503332 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 71.0 6.47e-01 100.0% 98.5%
3566631 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.79 69.0 5.89e-01 100.0% 72.5%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 66.0 5.47e-01 100.0% 54.1%
3479042 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 68.0 6.08e-01 100.0% 82.9%
3592540 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 63.0 5.95e-01 100.0% 75.0%
3482680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 67.0 6.17e-01 100.0% 89.2%
3583296 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 68.0 6.06e-01 100.0% 85.7%
3482646 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 67.0 4.43e-01 100.0% 29.0%
4218488 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.77 67.0 5.75e-01 100.0% 72.5%
3274551 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 64.0 5.58e-01 100.0% 61.3%
3471771 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 67.0 6.46e-01 100.0% 85.5%
3821920 4.1.1.283 beta barrels › SH3 › SH3 › SH3 › KOW6_SPT51-2 0.76 65.0 6.33e-01 100.0% 85.5%
3395948 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.76 64.0 6.18e-01 100.0% 83.6%
4605602 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 67.0 6.07e-01 100.0% 73.8%
3991896 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 65.0 5.32e-01 100.0% 63.2%
3830083 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.75 65.0 4.73e-01 100.0% 35.6%
3478898 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.91e-01 100.0% 72.3%
3480200 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 65.0 5.69e-01 100.0% 94.7%
3227565 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 64.0 6.05e-01 98.0% 95.0%
3623785 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 65.0 5.69e-01 100.0% 77.3%
3787441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 64.0 5.32e-01 100.0% 64.4%
3926207 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 64.0 6.31e-01 100.0% 92.5%
3411042 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 61.0 5.78e-01 95.9% 95.0%
4028731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 65.0 5.92e-01 100.0% 84.6%
3631298 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.74 63.0 5.55e-01 100.0% 77.3%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 65.0 6.16e-01 100.0% 86.2%
3170649 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.73 64.0 5.36e-01 100.0% 83.5%
3964422 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.72 59.0 4.21e-01 100.0% 29.4%
3176049 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.72 63.0 5.63e-01 100.0% 71.0%
3583485 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.72 61.0 4.86e-01 100.0% 50.5%
3501312 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 5.69e-01 100.0% 84.6%
5018124 9.2.1.0 beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin 0.71 60.0 5.02e-01 95.9% 62.4%
567 4.1.1.48 beta barrels › SH3 › SH3 › SH3 › DHFR_2 0.71 60.0 5.75e-01 100.0% 84.2%
3928050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 59.0 4.36e-01 100.0% 35.6%
3508319 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.56e-01 100.0% 75.4%
3725153 4.1.1.286 beta barrels › SH3 › SH3 › SH3 › DUF7072 0.66 56.0 4.86e-01 100.0% 61.3%
3236030 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 55.0 3.97e-01 98.0% 80.7%
3832069 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.64 43.0 3.97e-01 89.8% 53.8%
3871253 220.1.1.122 beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.63 54.0 3.97e-01 100.0% 59.3%
5055952 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.62 48.0 2.95e-01 87.8% 91.0%
3557698 220.1.1.122 beta barrels › PH domain-like › PH domain-like › PH domain-like › C2_SHIP1-2_first 0.62 49.0 4.02e-01 91.8% 72.0%
5052931 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 48.0 2.94e-01 93.9% 21.3%
4970437 5.1.9.2 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › Propeller domain in ABC toxin B component › FG-GAP 0.62 48.0 3.25e-01 95.9% 43.8%
5020252 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.62 50.0 3.96e-01 100.0% 44.2%
3332613 4.1.1.284 beta barrels › SH3 › SH3 › SH3 › SBNO 0.62 51.0 3.96e-01 100.0% 42.5%
5008207 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 52.0 4.51e-01 100.0% 80.0%
3559665 213.1.1.6 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › ODC_AZ 0.61 51.0 3.79e-01 95.9% 57.7%
3593811 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 3.91e-01 100.0% 90.4%
3971321 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.61 50.0 4.63e-01 100.0% 72.5%
1222122 12.3.1.14 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Hepar_II_III 0.60 44.0 2.79e-01 81.6% 36.0%
3767975 220.1.1.38 beta barrels › PH domain-like › PH domain-like › PH domain-like › UCH_N 0.60 50.0 3.98e-01 100.0% 68.2%
5060852 7089.1.1.0 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.60 41.0 4.26e-01 75.5% 88.9%
6331 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.59 46.0 3.44e-01 87.8% 41.4%
4032161 809.1.1.0 a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP 0.59 42.0 3.92e-01 87.8% 59.4%
3626094 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.58 49.0 3.52e-01 100.0% 71.6%
4029948 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.57 39.0 3.06e-01 75.5% 45.0%
5018537 5090.1.1.0 beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Viral glycoprotein, central and dimerisation domains › Viral glycoprotein, central and dimerisation domains 0.57 47.0 3.86e-01 100.0% 83.0%
3414142 109.27.1.0 alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain 0.57 41.0 2.97e-01 81.6% 24.2%
3605378 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.56 44.0 3.58e-01 93.9% 90.9%
3931799 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 40.0 4.14e-01 85.7% 84.4%
4012865 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.56 43.0 3.16e-01 89.8% 58.1%
4049072 2.4.1.6 beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal 0.56 42.0 3.47e-01 91.8% 45.5%
5054384 331.10.2.0 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.56 40.0 3.68e-01 81.6% 57.1%
5017958 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.56 46.0 3.38e-01 100.0% 60.7%
3596066 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 45.0 3.49e-01 100.0% 65.6%
853 9.1.1.23 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3598_N 0.54 44.0 3.37e-01 100.0% 68.9%
3253568 6.1.1.0 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.52 42.0 3.16e-01 100.0% 92.0%
4957722 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.51 38.0 3.00e-01 91.8% 34.1%
4019913 318.1.1.1 a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 0.51 37.0 3.12e-01 89.8% 46.3%
3228242 4210.1.1.1 a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.51 41.0 3.43e-01 100.0% 62.0%