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OP617743.1__UYL04841.1__EBOKLHFM_00245__00221

Bact-Vir

OP617743.1__UYL04841.1__EBOKLHFM_00245__00221

Identity

Accession:
OP617743 ↗
Kingdom:
phage

Quality

87.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Klebsiella_phage_KP13-26

TaxID: 2985660

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-70
PDB
Domain cluster: representative
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qi2A01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.70 61.0 5.14e-01 100.0% 57.7%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 56.0 5.70e-01 98.4% 89.8%
3q5zA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 60.0 4.87e-01 98.4% 76.0%
2rkuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.69 51.0 4.51e-01 79.0% 86.5%
2vgmA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.68 61.0 4.86e-01 100.0% 59.8%
4jrnA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.67 58.0 4.54e-01 100.0% 76.6%
7xpkA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.67 60.0 4.57e-01 100.0% 61.4%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 5.58e-01 93.5% 100.0%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.67 52.0 4.89e-01 100.0% 69.3%
3obyA01 2.30.30.870 Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A 0.66 56.0 4.68e-01 100.0% 54.1%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 5.16e-01 100.0% 79.4%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.20e-01 100.0% 83.1%
6my0A02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.20e-01 96.8% 83.1%
3askA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 57.0 5.73e-01 100.0% 96.8%
1wgsA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 4.20e-01 98.4% 42.9%
5kcoA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 53.0 5.42e-01 96.8% 94.9%
2avwD01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.64 55.0 4.31e-01 100.0% 61.0%
1b12C01 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.62 54.0 4.36e-01 98.4% 51.2%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 55.0 5.17e-01 100.0% 84.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 52.0 5.05e-01 100.0% 85.5%
4ngdA02 2.170.260.10 Mainly Beta › Beta Complex › paz domain › paz domain 0.61 52.0 4.37e-01 100.0% 86.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.95e-01 93.5% 90.3%
2f5tX02 2.30.30.690 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 4.60e-01 100.0% 78.9%
4hntA04 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.60 44.0 3.73e-01 82.3% 47.5%
3be3A00 2.30.30.320 Mainly Beta › Roll › SH3 type barrels. › DUF1653-like domain 0.60 53.0 4.95e-01 100.0% 90.8%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 50.0 4.80e-01 98.4% 86.3%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.59 51.0 4.86e-01 98.4% 94.6%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.59 44.0 4.54e-01 87.1% 91.1%
2lqkA00 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 49.0 4.79e-01 100.0% 85.7%
3tw6D02 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.57 44.0 4.13e-01 83.9% 68.4%
3fzxA00 2.40.360.20 Mainly Beta › Beta Barrel › YmcC-like fold › 0.56 46.0 3.26e-01 95.2% 42.0%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 43.0 4.40e-01 91.9% 88.7%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 3.59e-01 100.0% 41.1%
3bg3A01 3.10.600.10 Alpha Beta › Roll › pyruvate carboxylase f1077a mutant fold › pyruvate carboxylase f1077a mutant domain 0.55 42.0 3.59e-01 83.9% 80.2%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 43.0 3.68e-01 88.7% 84.0%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 43.0 4.37e-01 93.5% 90.5%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.54 37.0 3.90e-01 75.8% 80.4%
3g7nB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 45.0 3.02e-01 96.8% 89.1%
3bk5A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 45.0 3.15e-01 100.0% 81.7%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 43.0 3.30e-01 100.0% 87.0%
2xlpB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 40.0 2.58e-01 91.9% 44.6%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4519674 4.1.1.186 ↗ beta barrels › SH3 › SH3 › SH3 › DUF5397 0.73 59.0 6.13e-01 100.0% 96.6%
3570368 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.72 60.0 5.09e-01 100.0% 56.0%
4026274 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 62.0 4.77e-01 100.0% 42.9%
4941620 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 55.0 5.62e-01 96.8% 86.7%
4306285 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 57.0 5.55e-01 98.4% 78.6%
3393358 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 58.0 5.00e-01 98.4% 58.9%
3184235 4.1.1.17 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 0.70 62.0 4.71e-01 100.0% 46.9%
4644007 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.70 54.0 5.50e-01 96.8% 88.1%
3598499 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 58.0 4.42e-01 98.4% 40.0%
3272197 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 62.0 5.22e-01 100.0% 65.7%
3623084 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 62.0 4.89e-01 100.0% 53.6%
4138563 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 53.0 5.27e-01 96.8% 80.0%
4427477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.04e-01 100.0% 61.1%
3612090 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 57.0 5.80e-01 98.4% 93.3%
3940730 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 58.0 5.03e-01 100.0% 61.1%
3607985 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 56.0 4.73e-01 100.0% 53.3%
4484893 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.69 53.0 5.29e-01 98.4% 81.5%
3848399 4.8.1.24 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th 0.68 59.0 5.75e-01 100.0% 87.1%
3784770 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.68 60.0 5.68e-01 98.4% 94.7%
4937158 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 49.0 5.03e-01 100.0% 80.0%
4981041 375.1.1.299 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.68 49.0 5.34e-01 80.6% 94.0%
5029655 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.41e-01 98.4% 88.3%
3739064 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 61.0 6.02e-01 100.0% 95.4%
3448975 4.1.1.66 ↗ beta barrels › SH3 › SH3 › SH3 › LBR_tudor 0.68 59.0 5.85e-01 100.0% 93.8%
5069062 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.67 52.0 5.35e-01 98.4% 89.8%
3656401 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 55.0 5.19e-01 100.0% 74.7%
4354770 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.67 52.0 5.01e-01 98.4% 75.7%
3625963 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.67 57.0 4.97e-01 98.4% 62.1%
3301015 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.72e-01 100.0% 93.8%
3609256 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 60.0 5.36e-01 100.0% 78.8%
3602511 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 52.0 5.05e-01 100.0% 77.1%
3584109 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 58.0 4.46e-01 100.0% 73.6%
3484700 4.8.1.10 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.66 60.0 5.07e-01 100.0% 64.0%
3719860 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.68e-01 100.0% 58.3%
647 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.65 53.0 4.20e-01 98.4% 42.9%
3932647 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 58.0 5.25e-01 100.0% 72.9%
5058103 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 51.0 4.97e-01 100.0% 79.4%
3482360 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 57.0 5.03e-01 100.0% 84.4%
3218475 4.1.1.390 ↗ beta barrels › SH3 › SH3 › SH3 › PF29855 0.64 57.0 4.58e-01 100.0% 53.3%
3978997 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.64 56.0 4.89e-01 100.0% 65.3%
3942912 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.64 56.0 5.09e-01 100.0% 74.1%
3726361 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 52.0 4.63e-01 90.3% 73.3%
3185321 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.64 56.0 5.29e-01 98.4% 88.0%
3924975 4.1.1.377 ↗ beta barrels › SH3 › SH3 › SH3 › MSL3_chromo-like 0.64 54.0 5.01e-01 98.4% 75.0%
4438983 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.64 53.0 4.55e-01 98.4% 58.9%
3411042 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 52.0 5.27e-01 91.9% 95.0%
3720660 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 56.0 5.25e-01 98.4% 82.7%
3408588 4.1.1.243 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Myosin-XVIIIa 0.63 50.0 4.86e-01 98.4% 78.6%
4250193 4.1.1.78 ↗ beta barrels › SH3 › SH3 › SH3 › TTD 0.63 54.0 4.85e-01 98.4% 72.2%
3768116 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.63 55.0 3.79e-01 98.4% 28.8%
3553413 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.63 55.0 4.98e-01 98.4% 72.9%
3289944 4.1.1.323 ↗ beta barrels › SH3 › SH3 › SH3 › WYL 0.63 54.0 4.81e-01 100.0% 67.8%
4031510 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 54.0 4.80e-01 100.0% 67.8%
3608562 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 54.0 4.08e-01 100.0% 88.1%
4022025 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.62 50.0 3.86e-01 100.0% 38.6%
3511007 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.62 55.0 4.41e-01 98.4% 53.3%
3615426 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.62 54.0 4.09e-01 98.4% 44.0%
3791777 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.62 54.0 4.93e-01 100.0% 87.1%
3972550 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.62 53.0 4.64e-01 100.0% 62.0%
4123449 4.8.1.35 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 0.62 47.0 4.32e-01 85.5% 75.3%
3742938 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.62 50.0 4.94e-01 93.5% 84.6%
3280641 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.62 53.0 4.62e-01 100.0% 64.0%
591 4.1.1.139 ↗ beta barrels › SH3 › SH3 › SH3 › IF5A-like_N 0.62 55.0 5.14e-01 100.0% 82.9%
3888395 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.62 55.0 4.95e-01 100.0% 91.7%
3761319 4.1.1.253 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4537 0.61 53.0 5.31e-01 100.0% 98.5%
3283097 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.61 52.0 4.41e-01 100.0% 58.2%
3700865 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 4.11e-01 100.0% 68.1%
3519122 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.61 51.0 4.59e-01 100.0% 67.8%
3286662 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.60 48.0 4.23e-01 100.0% 58.0%
3009336 3794.1.2.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.60 43.0 4.08e-01 80.6% 64.4%
5015352 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 49.0 4.52e-01 100.0% 71.1%
3406338 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.59 51.0 4.24e-01 100.0% 65.2%
3974490 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 48.0 4.45e-01 93.5% 72.5%
4615629 4.1.1.449 ↗ beta barrels › SH3 › SH3 › SH3 › DUF1292 0.58 45.0 4.15e-01 88.7% 78.8%
3812766 4.1.1.42 ↗ beta barrels › SH3 › SH3 › SH3 › Agenet 0.58 47.0 4.65e-01 100.0% 97.1%
4663942 3794.1.2.3 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase › PYC_OADA 0.57 44.0 3.86e-01 83.9% 82.2%
4937122 284.1.1.0 ↗ a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.56 47.0 4.47e-01 98.4% 98.7%
3507010 3794.1.2.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › a+b domain in pyruvate carboxylase 0.56 41.0 3.51e-01 80.6% 72.4%
4119667 243.3.1.3 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.51 41.0 3.78e-01 93.5% 88.2%
3190757 375.1.1.21 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-ZPR1 0.50 36.0 3.64e-01 83.9% 80.0%
D2 medium residues 87-184
PDB
Domain cluster: rep: NC_031057.1__YP_009285548.1__BI032_gp010__00010__D132-221