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OP617745.1__UYL05215.1__DIDNDMLP_00230__00224

Bact-Vir

OP617745.1__UYL05215.1__DIDNDMLP_00230__00224

Identity

Accession:
OP617745 ↗
Kingdom:
phage

Quality

83.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alcyoneusvirus› Klebsiella_phage_KP13-7

TaxID: 2985662

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-63
PDB
Domain cluster: rep: OR228459.1__WNV47602.1__X__00489__D11-65
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.61 43.0 3.52e-01 100.0% 39.7%
4f0qD01 2.30.280.20 Mainly Beta › Roll › PUA domain-like › 0.61 52.0 3.51e-01 100.0% 32.9%
2j8gA03 2.20.120.10 Mainly Beta › Single Sheet › Multimodular pneumococcal cell wall endolysin, domain 3 › Multimodular pneumococcal cell wall endolysin, domain 3 0.59 32.0 3.33e-01 78.7% 55.2%
3pnrA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 42.0 2.92e-01 80.3% 84.2%
1eyqA02 3.50.70.10 Alpha Beta › 3-Layer(bba) Sandwich › Chalcone isomerase › 0.57 40.0 2.99e-01 100.0% 28.3%
2l89A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 43.0 3.61e-01 93.4% 46.3%
4wksC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.56 38.0 3.56e-01 70.5% 85.3%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 44.0 2.67e-01 96.7% 88.0%
1dfaA01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.52 45.0 3.19e-01 100.0% 91.6%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 34.0 3.43e-01 82.0% 66.1%
5ek8A01 2.60.40.3330 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.17e-01 85.2% 75.4%
6vilA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.50 45.0 3.39e-01 100.0% 47.6%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3608162 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.62 37.0 2.73e-01 80.3% 21.2%
3313182 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.60 39.0 3.82e-01 100.0% 60.0%
4263339 4.1.1.3 ↗ beta barrels › SH3 › SH3 › SH3 › KOW 0.57 36.0 3.36e-01 100.0% 48.8%
3481883 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.56 50.0 3.87e-01 100.0% 74.8%
3598222 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 39.0 3.78e-01 96.7% 64.3%
4020093 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 40.0 3.22e-01 100.0% 35.6%
3691144 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.56 43.0 4.10e-01 95.1% 71.4%
3723834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 42.0 4.09e-01 95.1% 71.4%
3708407 4.1.1.18 ↗ beta barrels › SH3 › SH3 › SH3 › CAP_GLY 0.55 38.0 3.47e-01 96.7% 52.9%
4954561 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.55 45.0 3.56e-01 100.0% 43.0%
3264034 327.11.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Prokaryotic type KH domain (KH-domain type II) 0.54 37.0 3.64e-01 100.0% 67.7%
4022450 7516.1.1.43 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › DUF604 0.54 44.0 2.84e-01 100.0% 94.3%
3770802 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.53 46.0 3.96e-01 100.0% 71.3%
5054484 304.11.1.0 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase 0.53 36.0 3.44e-01 95.1% 61.4%
4493573 4964.1.1.2 ↗ alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.53 39.0 2.83e-01 83.6% 38.5%
3954203 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.52 41.0 3.97e-01 100.0% 76.0%
3226615 4.1.1.389 ↗ beta barrels › SH3 › SH3 › SH3 › PF30352 0.52 38.0 3.35e-01 96.7% 51.6%
4029989 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.51 34.0 3.53e-01 73.8% 76.4%
2097771 1.1.5.23 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP 0.51 44.0 3.26e-01 100.0% 44.1%
3350720 1.1.1.28 ↗ beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_C, TAXi_N 0.51 40.0 2.59e-01 95.1% 25.2%
3697893 2004.1.1.250 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd 0.51 39.0 2.22e-01 82.0% 51.9%
3533770 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.51 34.0 2.94e-01 100.0% 41.0%
4944389 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 36.0 3.60e-01 80.3% 72.3%
3969414 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 44.0 3.75e-01 100.0% 82.0%