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OP617745.1__UYL05221.1__DIDNDMLP_00236__00230

Bact-Vir

OP617745.1__UYL05221.1__DIDNDMLP_00236__00230

Identity

Accession:
OP617745 ↗
Kingdom:
phage

Quality

82.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alcyoneusvirus› Klebsiella_phage_KP13-7

TaxID: 2985662

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-75
PDB
Domain cluster: representative
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5vmzA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.71 38.0 4.94e-01 83.8% 100.0%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.65 36.0 2.95e-01 93.2% 29.2%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.64 51.0 3.85e-01 91.9% 35.1%
4qdiA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.61 41.0 2.94e-01 70.3% 24.5%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.61 43.0 3.53e-01 75.7% 40.7%
4h0oA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 51.0 3.89e-01 95.9% 61.2%
3mfqA01 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.60 51.0 4.21e-01 97.3% 93.6%
1k3sA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.59 41.0 3.68e-01 73.0% 96.3%
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.59 43.0 3.34e-01 100.0% 33.5%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 50.0 4.07e-01 94.6% 77.5%
2ywlA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 43.0 3.31e-01 78.4% 97.1%
3o4hA01 2.130.10.150 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain 0.58 48.0 3.18e-01 90.5% 58.3%
3k6qA02 3.30.160.620 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 50.0 4.69e-01 95.9% 93.3%
3lovA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 37.0 2.99e-01 89.2% 32.9%
3ap9A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 48.0 3.84e-01 94.6% 71.5%
2wsuB02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 46.0 3.82e-01 100.0% 75.0%
6v55A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 44.0 3.29e-01 90.5% 71.3%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.54 46.0 3.90e-01 100.0% 95.5%
3igfA02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 36.0 3.66e-01 90.5% 70.3%
3d6wB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 33.0 3.37e-01 87.8% 62.9%
1oq1B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 3.33e-01 98.6% 63.5%
1nr0A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 47.0 3.13e-01 100.0% 33.2%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.28e-01 100.0% 52.9%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 2.91e-01 100.0% 31.0%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 44.0 3.03e-01 100.0% 88.4%
1h30A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 44.0 3.27e-01 100.0% 70.7%
3tavA00 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.51 44.0 3.06e-01 98.6% 33.0%
ECOD (55)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3436173 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.75 49.0 3.16e-01 91.9% 15.7%
4965206 4221.1.1.3 ↗ a+b two layers › YkuJ-like › YkuJ-like › YkuJ-like › PF26008 0.74 50.0 5.17e-01 87.8% 74.3%
3468148 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.71 46.0 3.38e-01 91.9% 25.1%
3593728 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.64 45.0 3.62e-01 74.3% 52.0%
3229102 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.62 51.0 3.62e-01 100.0% 27.6%
3761776 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 56.0 3.42e-01 100.0% 41.3%
4987737 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.62 44.0 2.89e-01 73.0% 38.4%
3711721 223.2.1.1 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin 0.61 43.0 3.52e-01 75.7% 52.7%
3228574 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 51.0 3.57e-01 98.6% 27.6%
3233005 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 53.0 3.71e-01 100.0% 30.2%
3227136 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 50.0 3.73e-01 98.6% 33.3%
3218627 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 52.0 3.80e-01 100.0% 34.0%
3243588 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.61 53.0 3.52e-01 100.0% 32.6%
7054 881.2.1.1 ↗ a+b three layers › Mog1p/PsbP-like › TM1622-like › TM1622-like › DUF3242 0.61 43.0 3.60e-01 75.7% 43.3%
3239249 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 51.0 3.64e-01 98.6% 29.4%
3235669 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 51.0 4.42e-01 98.6% 60.0%
4029464 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 51.0 4.13e-01 93.2% 86.4%
3244243 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 52.0 3.93e-01 100.0% 37.9%
3801134 3257.1.1.0 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain 0.60 39.0 2.96e-01 95.9% 27.2%
3416385 3257.1.1.1 ↗ a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.60 39.0 2.90e-01 91.9% 25.1%
5033093 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 47.0 4.07e-01 91.9% 54.8%
3212404 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 50.0 3.57e-01 100.0% 28.6%
3215907 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 49.0 3.46e-01 97.3% 33.3%
3211176 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.58 50.0 3.53e-01 100.0% 29.8%
3225057 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.58 48.0 3.74e-01 97.3% 41.6%
3402824 5.1.4.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 0.58 49.0 3.05e-01 91.9% 72.0%
3507415 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 52.0 3.84e-01 100.0% 56.3%
3242542 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.58 49.0 3.49e-01 100.0% 29.0%
3247669 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.57 48.0 3.41e-01 98.6% 28.2%
4260682 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.57 50.0 3.79e-01 100.0% 68.1%
3212555 2484.1.1.200 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.56 47.0 4.06e-01 98.6% 57.7%
3484246 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 49.0 3.14e-01 100.0% 73.6%
3482448 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.55 48.0 3.73e-01 100.0% 74.9%
5028466 304.56.1.0 ↗ a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like 0.55 47.0 4.06e-01 97.3% 96.7%
5013467 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.54 49.0 3.22e-01 100.0% 38.4%
3595430 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.54 46.0 3.43e-01 97.3% 78.5%
4977715 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 48.0 4.19e-01 100.0% 86.1%
4218917 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.54 44.0 3.06e-01 94.6% 72.6%
3509390 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 44.0 3.81e-01 91.9% 85.8%
3222321 207.1.1.81 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.54 45.0 3.19e-01 97.3% 29.4%
4487335 219.1.1.6 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.54 39.0 2.69e-01 77.0% 83.3%
4301684 71.1.1.3 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB 0.53 44.0 3.34e-01 91.9% 65.6%
4024327 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 47.0 3.08e-01 98.6% 22.9%
5071005 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 37.0 3.13e-01 74.3% 93.1%
4256135 6129.1.1.1 ↗ beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.53 45.0 3.40e-01 97.3% 39.5%
3212409 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 42.0 3.47e-01 91.9% 84.1%
3928299 10.1.1.17 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 43.0 3.28e-01 90.5% 77.6%
5078978 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.52 46.0 3.14e-01 100.0% 46.4%
4029119 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 45.0 2.96e-01 100.0% 37.7%
4956688 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.51 43.0 3.61e-01 100.0% 92.1%
4453958 274.1.1.23 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF5374 0.51 34.0 3.76e-01 73.0% 86.7%
4031750 274.1.1.25 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.51 44.0 3.94e-01 100.0% 69.7%
4176398 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.51 44.0 3.03e-01 100.0% 36.7%
4085834 2003.1.5.13 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth 0.50 43.0 2.93e-01 100.0% 33.4%
3987217 2004.1.1.159 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.50 42.0 2.86e-01 95.9% 82.0%