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OP620778.1__WGN97521.1__X__00107
Bact-VirOP620778.1__WGN97521.1__X__00107
Identity
- Accession:
- OP620778 ↗
- Kingdom:
- phage
Quality
81.7
mean pLDDT
Taxonomy
TaxID: 2832595
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 4-74
Domain cluster:
representative
D2
medium
residues 75-126
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.89 | 81.0 | 5.92e-01 | 100.0% | 53.1% |
| 3gnlB02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.89 | 77.0 | 6.98e-01 | 94.2% | 73.5% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.87 | 74.0 | 4.92e-01 | 100.0% | 25.8% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.86 | 74.0 | 6.11e-01 | 96.2% | 62.6% |
| 1ni3A03 | 1.10.150.300 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Obg-related GTPase Ych/YyaF, coiled-coil domain | 0.86 | 77.0 | 6.32e-01 | 100.0% | 65.9% |
| 5b1oA00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.83 | 74.0 | 6.88e-01 | 100.0% | 81.5% |
| 2qvaA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.82 | 65.0 | 6.53e-01 | 96.2% | 86.8% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.80 | 67.0 | 5.82e-01 | 98.1% | 61.5% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.79 | 68.0 | 6.12e-01 | 100.0% | 69.3% |
| 1rfyB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.79 | 68.0 | 5.80e-01 | 100.0% | 69.3% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.77 | 62.0 | 6.33e-01 | 90.4% | 94.1% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.76 | 68.0 | 5.40e-01 | 100.0% | 52.9% |
| 1z5zA02 | 1.20.120.850 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SWI2/SNF2 ATPases, N-terminal domain | 0.75 | 56.0 | 5.00e-01 | 84.6% | 56.6% |
| 1z0jB00 | 4.10.860.20 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain | 0.74 | 58.0 | 5.87e-01 | 88.5% | 88.2% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.74 | 66.0 | 6.25e-01 | 100.0% | 96.7% |
| 4dyqA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.73 | 59.0 | 4.82e-01 | 100.0% | 47.6% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.72 | 56.0 | 5.77e-01 | 90.4% | 100.0% |
| 2cazC00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.72 | 59.0 | 5.60e-01 | 96.2% | 100.0% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.70 | 58.0 | 4.36e-01 | 100.0% | 42.8% |
| 1sg2A00 | 3.30.910.20 | Alpha Beta › 2-Layer Sandwich › Protein Binding, DinI Protein; Chain A › Skp domain | 0.70 | 57.0 | 4.35e-01 | 100.0% | 37.6% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.70 | 57.0 | 4.96e-01 | 94.2% | 75.3% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.69 | 57.0 | 4.73e-01 | 100.0% | 50.0% |
| 3e22A03 | 1.10.287.600 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.69 | 50.0 | 5.03e-01 | 80.8% | 96.3% |
| 2jdiH02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.66 | 47.0 | 4.98e-01 | 80.8% | 97.6% |
| 7dukB01 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 52.0 | 5.45e-01 | 94.2% | 97.8% |
| 5mmjb02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 54.0 | 5.42e-01 | 100.0% | 94.2% |
| 4toiA02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.62 | 47.0 | 4.84e-01 | 80.8% | 93.8% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3482224 | 192.10.1.0 ↗ | alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain | 0.95 | 76.0 | 6.97e-01 | 84.6% | 67.7% |
| 4038742 | 150.5.1.53 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PPE | 0.91 | 84.0 | 6.73e-01 | 100.0% | 54.7% |
| 3222544 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.91 | 84.0 | 6.09e-01 | 100.0% | 40.0% |
| 3782703 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.91 | 83.0 | 6.38e-01 | 100.0% | 47.3% |
| 4171351 | 1.1.5.44 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › SecDF_P1_head | 0.87 | 76.0 | 5.20e-01 | 100.0% | 30.3% |
| 3224003 | 9001.1.1.3 ↗ | alpha bundles › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMEM120/ELO/TLC › TMPIT | 0.86 | 76.0 | 6.59e-01 | 100.0% | 66.3% |
| 3199608 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.86 | 73.0 | 5.58e-01 | 92.3% | 73.6% |
| 3252182 | 3443.1.1.0 ↗ | alpha duplicates or obligate multimers › Get5 carboxyl domain › Get5 carboxyl domain › Get5 carboxyl domain | 0.85 | 67.0 | 7.10e-01 | 86.5% | 100.0% |
| 3650747 | 626.1.1.1 ↗ | alpha complex topology › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › Formin homology 2 domain (FH2 domain) › FH2 | 0.84 | 75.0 | 4.40e-01 | 100.0% | 13.5% |
| 3694629 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.84 | 73.0 | 6.38e-01 | 100.0% | 73.8% |
| 3997165 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.83 | 75.0 | 5.25e-01 | 100.0% | 34.2% |
| 3309441 | 547.1.1.0 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain | 0.82 | 72.0 | 5.94e-01 | 100.0% | 55.6% |
| 3234964 | 604.7.1.1 ↗ | alpha bundles › Spectrin repeat-like › Tubulin chaperone cofactor A › Tubulin chaperone cofactor A › TBCA | 0.82 | 71.0 | 5.62e-01 | 100.0% | 73.6% |
| 3923922 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.82 | 66.0 | 5.82e-01 | 88.5% | 68.0% |
| 4010395 | 622.4.1.26 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related › HisKA | 0.81 | 70.0 | 6.44e-01 | 100.0% | 94.3% |
| 3982421 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.81 | 70.0 | 6.29e-01 | 100.0% | 88.0% |
| 3884327 | 192.15.1.0 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains | 0.81 | 70.0 | 5.85e-01 | 98.1% | 56.7% |
| 3972992 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.80 | 70.0 | 6.57e-01 | 100.0% | 84.6% |
| 3976486 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.80 | 67.0 | 5.58e-01 | 100.0% | 54.4% |
| 5002349 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.78 | 67.0 | 6.30e-01 | 100.0% | 81.5% |
| 4174467 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.77 | 66.0 | 5.61e-01 | 100.0% | 58.9% |
| 4965518 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.76 | 65.0 | 5.26e-01 | 100.0% | 50.5% |
| 3277923 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.75 | 64.0 | 5.59e-01 | 100.0% | 62.7% |
| 1935160 | 3826.1.1.1 ↗ | alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Trns_repr_metal | 0.75 | 64.0 | 5.46e-01 | 100.0% | 57.8% |
| 3362460 | 304.60.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › KIP1 | 0.73 | 62.0 | 5.60e-01 | 100.0% | 70.7% |
| 3561879 | 5076.2.1.9 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › Choline_transpo | 0.72 | 63.0 | 3.76e-01 | 100.0% | 59.0% |
| 5028184 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.72 | 58.0 | 3.64e-01 | 86.5% | 19.2% |
| 4948755 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.68 | 53.0 | 4.84e-01 | 88.5% | 64.3% |
| 3234270 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.68 | 49.0 | 4.29e-01 | 82.7% | 48.2% |
| 3741935 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.66 | 55.0 | 3.86e-01 | 98.1% | 28.6% |