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OP620778.1__WGN97701.1__X__00287
Bact-VirOP620778.1__WGN97701.1__X__00287
Identity
- Accession:
- OP620778 ↗
- Kingdom:
- phage
Quality
92.2
mean pLDDT
Taxonomy
TaxID: 2832595
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 43-95
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1kaeA03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.81 | 57.0 | 5.67e-01 | 77.4% | 70.9% |
| 2mmbA00 | 4.10.640.20 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S18 › | 0.79 | 56.0 | 4.43e-01 | 75.5% | 65.4% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.79 | 55.0 | 5.47e-01 | 79.2% | 70.9% |
| 1qsaA02 | 1.10.1240.20 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain | 0.79 | 55.0 | 5.00e-01 | 83.0% | 55.7% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 57.0 | 5.34e-01 | 77.4% | 85.7% |
| 2rklF00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.76 | 54.0 | 5.44e-01 | 92.5% | 75.0% |
| 2ouwB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.75 | 60.0 | 4.38e-01 | 86.8% | 61.0% |
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.72 | 52.0 | 5.01e-01 | 77.4% | 77.0% |
| 1e5rB02 | 1.10.1720.10 | Mainly Alpha › Orthogonal Bundle › Proline Oxidase; Chain: A, Domain 2 › L-proline 3-hydroxylase, C-terminal domain | 0.71 | 53.0 | 4.48e-01 | 79.2% | 60.7% |
| 3lewA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.70 | 57.0 | 3.53e-01 | 90.6% | 27.3% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.69 | 54.0 | 5.12e-01 | 90.6% | 70.3% |
| 3k7xA00 | 1.50.10.20 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.69 | 57.0 | 3.53e-01 | 98.1% | 34.0% |
| 4b0zA00 | 1.25.40.990 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.67 | 59.0 | 3.86e-01 | 98.1% | 40.1% |
| 1yvwA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.66 | 58.0 | 4.78e-01 | 96.2% | 60.9% |
| 4l8eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 52.0 | 4.17e-01 | 90.6% | 77.3% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.65 | 57.0 | 4.21e-01 | 94.3% | 52.4% |
| 3kjxD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.61 | 45.0 | 4.29e-01 | 79.2% | 80.3% |
| 4xzjA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.58 | 47.0 | 3.18e-01 | 92.5% | 75.4% |
| 4ga4A01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.56 | 43.0 | 4.09e-01 | 90.6% | 79.1% |
| 4muoA01 | 1.20.970.10 | Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C | 0.55 | 43.0 | 3.98e-01 | 88.7% | 77.8% |
| 3l4aA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.54 | 40.0 | 3.12e-01 | 79.2% | 75.2% |
| 2psmA00 | 1.20.1250.70 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interleukin-15/Interleukin-21 | 0.54 | 46.0 | 3.64e-01 | 100.0% | 74.4% |
| 3bh1A02 | 1.20.1570.10 | Mainly Alpha › Up-down Bundle › dip2346 fold › dip2346 domain like | 0.54 | 42.0 | 3.59e-01 | 94.3% | 99.0% |
| 5gp9A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.52 | 36.0 | 3.75e-01 | 73.6% | 89.6% |
| 3t5qG01 | 1.10.150.550 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Arenavirus nucleocapsid protein, head domain | 0.52 | 38.0 | 3.24e-01 | 86.8% | 88.5% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3814836 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.90 | 65.0 | 4.45e-01 | 75.5% | 25.0% |
| 3314628 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.85 | 68.0 | 4.36e-01 | 84.9% | 21.9% |
| 3818907 | 109.4.1.1305 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, PPR_long, TPR_24 | 0.84 | 67.0 | 4.36e-01 | 84.9% | 22.0% |
| 3178367 | 7524.1.1.2 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Histidinol_dh | 0.81 | 60.0 | 3.50e-01 | 83.0% | 9.5% |
| 3675493 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.78 | 62.0 | 4.45e-01 | 86.8% | 33.1% |
| 3874338 | 150.3.1.22 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › PRF | 0.78 | 61.0 | 4.06e-01 | 83.0% | 69.6% |
| 3339600 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.77 | 63.0 | 5.04e-01 | 88.7% | 49.0% |
| 3348296 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.75 | 66.0 | 5.19e-01 | 96.2% | 71.4% |
| 3324469 | 109.4.1.1641 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_3, PPR_long | 0.75 | 63.0 | 4.03e-01 | 90.6% | 20.9% |
| 3306695 | 109.4.1.2938 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2, PPR_3, E_motif | 0.75 | 61.0 | 3.93e-01 | 92.5% | 20.2% |
| 3277195 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.75 | 52.0 | 5.21e-01 | 73.6% | 78.2% |
| 3666478 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.74 | 62.0 | 4.03e-01 | 92.5% | 32.3% |
| 3453706 | 109.4.1.189 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_2 | 0.73 | 58.0 | 5.11e-01 | 88.7% | 60.0% |
| 3378963 | 109.4.1.1254 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, E_motif | 0.73 | 60.0 | 3.91e-01 | 90.6% | 22.0% |
| 3356444 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.72 | 60.0 | 4.74e-01 | 92.5% | 66.4% |
| 4162588 | 109.4.1.1276 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FAT, HEAT_ATR | 0.71 | 59.0 | 4.03e-01 | 98.1% | 45.9% |
| 3375617 | 192.5.1.30 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF641 | 0.70 | 55.0 | 4.71e-01 | 88.7% | 55.0% |
| 3995036 | 109.27.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK_BPM_SPOP | 0.70 | 55.0 | 5.31e-01 | 86.8% | 75.0% |
| 3826428 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.70 | 61.0 | 4.48e-01 | 96.2% | 53.3% |
| 3451319 | 109.4.1.1257 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2 | 0.70 | 60.0 | 4.73e-01 | 96.2% | 70.0% |
| 3462555 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.69 | 58.0 | 3.99e-01 | 92.5% | 42.8% |
| 3773938 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.69 | 56.0 | 5.43e-01 | 90.6% | 78.3% |
| 3819533 | 109.27.1.4 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BTB | 0.68 | 56.0 | 3.76e-01 | 90.6% | 24.0% |
| 3346105 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.68 | 57.0 | 4.42e-01 | 96.2% | 60.0% |
| 3927550 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.67 | 53.0 | 5.15e-01 | 86.8% | 76.7% |
| 3953113 | 101.1.2.246 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_PafC | 0.63 | 48.0 | 3.69e-01 | 84.9% | 90.0% |
| 3201934 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.56 | 41.0 | 3.45e-01 | 88.7% | 60.9% |
| 3786711 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.55 | 42.0 | 3.26e-01 | 88.7% | 35.6% |