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OP620778.1__WGN97789.1__X__00375

Bact-Vir

OP620778.1__WGN97789.1__X__00375

Identity

Accession:
OP620778 ↗
Kingdom:
phage

Quality

90.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 7-78
PDB
Domain cluster: representative
CATH (43)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tr6A01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.71 38.0 2.82e-01 72.2% 20.6%
1h6lA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.68 50.0 3.17e-01 77.8% 35.7%
4h5bA00 3.30.1460.70 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.67 46.0 3.59e-01 73.6% 33.6%
3drwB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.63 36.0 2.29e-01 87.5% 12.1%
5dynA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.62 44.0 3.91e-01 75.0% 82.1%
2fpnA01 3.30.2030.10 Alpha Beta › 2-Layer Sandwich › TBP-like › YwmB-like 0.60 42.0 3.36e-01 73.6% 37.1%
2oq8A00 2.60.40.2930 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 43.0 3.41e-01 76.4% 58.7%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.60 41.0 4.29e-01 76.4% 80.3%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.59 43.0 3.53e-01 76.4% 91.7%
1vavA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 45.0 3.17e-01 81.9% 61.3%
2nvnA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.58 50.0 4.26e-01 97.2% 98.3%
2ei0A02 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 42.0 3.37e-01 77.8% 42.8%
2pwwA00 3.30.310.100 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YugN-like 0.58 42.0 3.65e-01 84.7% 48.7%
2rb7A01 3.40.630.10 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases 0.58 40.0 2.78e-01 73.6% 50.6%
2db2A01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 42.0 3.92e-01 80.6% 63.8%
4q05A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.56 39.0 2.60e-01 73.6% 25.4%
1v89A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 4.15e-01 100.0% 89.8%
1iv0A00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.56 38.0 3.52e-01 72.2% 85.7%
5w8mA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.56 42.0 3.07e-01 80.6% 52.6%
4ep4A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 38.0 2.98e-01 72.2% 58.4%
4fh3A02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.55 39.0 3.31e-01 75.0% 92.0%
2kinA00 3.40.850.10 Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain 0.55 40.0 2.84e-01 79.2% 56.3%
3pg7A02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 47.0 4.18e-01 100.0% 90.0%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.55 47.0 2.97e-01 100.0% 89.3%
3vhxF00 2.60.40.4330 Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain 0.54 37.0 3.39e-01 72.2% 67.6%
3r9pB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.54 38.0 2.87e-01 73.6% 66.7%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 44.0 3.01e-01 91.7% 29.4%
4opmA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 39.0 2.68e-01 80.6% 27.8%
4bg7A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 37.0 3.38e-01 73.6% 60.2%
2bolA03 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 42.0 3.89e-01 87.5% 89.2%
3tghA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.53 41.0 2.72e-01 86.1% 31.7%
3wcyA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 36.0 3.45e-01 72.2% 84.9%
1rl1A00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.88e-01 88.9% 77.2%
1gmeA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 41.0 3.27e-01 86.1% 58.7%
4p4mA02 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.52 36.0 3.14e-01 73.6% 82.6%
2w7qB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.51 41.0 3.09e-01 87.5% 51.7%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 39.0 3.69e-01 86.1% 78.3%
3q9oA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.20e-01 100.0% 64.8%
1fyhB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 35.0 3.14e-01 72.2% 94.2%
1gteA04 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 44.0 3.51e-01 100.0% 64.7%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 44.0 3.64e-01 100.0% 84.6%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.50 40.0 3.12e-01 94.4% 100.0%
2c4iA01 2.40.128.30 Mainly Beta › Beta Barrel › Lipocalin › Avidin-like 0.50 37.0 3.23e-01 80.6% 84.7%
ECOD (64)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3825307 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.69 51.0 2.89e-01 77.8% 15.3%
5040676 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 49.0 3.00e-01 75.0% 27.6%
3808264 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.69 51.0 2.89e-01 77.8% 13.2%
3207726 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.65 47.0 3.01e-01 76.4% 31.8%
4987838 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.65 46.0 3.54e-01 73.6% 40.0%
4142474 5.1.4.357 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WDCP 0.64 47.0 2.95e-01 76.4% 31.9%
3444104 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 44.0 2.89e-01 73.6% 25.6%
3850746 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.63 46.0 2.79e-01 76.4% 21.8%
3233381 5.1.4.47 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N 0.62 47.0 3.01e-01 80.6% 23.2%
3929265 2484.5.1.2 mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH 0.62 43.0 3.55e-01 72.2% 80.0%
4022543 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.62 53.0 3.77e-01 98.6% 93.2%
3537639 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 45.0 2.78e-01 76.4% 22.4%
3195208 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 43.0 3.12e-01 72.2% 95.8%
3581555 633.33.1.1 alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz 0.61 43.0 2.89e-01 73.6% 63.3%
4926802 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.61 44.0 3.22e-01 76.4% 86.7%
3593811 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 44.0 3.73e-01 77.8% 88.0%
3597395 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 43.0 2.46e-01 77.8% 18.3%
3881061 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.60 42.0 4.40e-01 86.1% 83.1%
3632850 5.1.4.119 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Rav1p_C 0.60 46.0 2.90e-01 81.9% 30.4%
3276769 5.1.4.262 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_CAF1B_HIR1 0.60 43.0 2.69e-01 76.4% 26.9%
3597697 5.1.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.60 41.0 3.02e-01 72.2% 67.0%
3592741 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.59 51.0 4.86e-01 95.8% 97.6%
3738388 5.1.4.179 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 0.58 42.0 2.74e-01 76.4% 36.1%
3627771 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.58 43.0 4.13e-01 90.3% 68.2%
3772065 220.1.1.132 beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.58 48.0 4.18e-01 94.4% 88.7%
3507252 2484.1.1.99 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.58 46.0 3.82e-01 88.9% 63.0%
3585489 5.1.4.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.58 41.0 2.68e-01 77.8% 25.2%
5046724 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.58 40.0 3.47e-01 73.6% 64.3%
3430977 213.1.1.0 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) 0.58 44.0 3.29e-01 80.6% 93.1%
3940203 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.57 46.0 4.23e-01 91.7% 96.0%
3460207 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.57 44.0 2.94e-01 81.9% 97.8%
3671149 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.57 46.0 2.90e-01 87.5% 91.1%
3931229 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 42.0 2.62e-01 77.8% 23.3%
3421076 5.1.3.142 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like 0.57 41.0 2.73e-01 77.8% 32.1%
4564292 2484.1.1.174 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH 0.56 39.0 3.39e-01 73.6% 63.5%
1294511 7579.1.1.36 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 0.56 39.0 2.60e-01 73.6% 25.4%
3803797 220.1.1.181 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_ULP 0.56 46.0 3.98e-01 95.8% 91.7%
3600720 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 46.0 4.17e-01 90.3% 86.3%
None 0.55 44.0 2.77e-01 88.9% 90.7%
3284941 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 36.0 3.17e-01 70.8% 45.7%
3505751 319.1.1.1 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.55 44.0 3.91e-01 87.5% 79.0%
3253183 328.8.1.1 a+b two layers › IF3-like › Schlafen 8 › Schlafen 8 › SLFN_AlbA_2 0.55 43.0 3.00e-01 88.9% 24.2%
4070525 2484.1.1.31 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Glucokinase 0.55 38.0 3.26e-01 70.8% 84.2%
3607858 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.55 48.0 4.27e-01 98.6% 81.0%
3665166 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 47.0 3.16e-01 98.6% 98.4%
5023704 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.55 40.0 3.25e-01 79.2% 75.2%
3416181 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 39.0 2.54e-01 77.8% 26.8%
3945393 7089.1.1.2 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF5405 0.55 39.0 3.85e-01 76.4% 92.5%
3514061 2484.1.1.99 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Peptidase_A17 0.55 44.0 3.35e-01 88.9% 48.9%
3610568 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.54 40.0 3.52e-01 79.2% 99.1%
5079140 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 38.0 3.43e-01 73.6% 94.2%
3177726 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 44.0 3.43e-01 97.2% 59.5%
3833269 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.54 38.0 2.57e-01 75.0% 33.3%
3277940 3844.2.1.1 a+b two layers › hydrogenase expression protein-like › MybT EspG5 chaperone › MybT EspG5 chaperone › ESX-1_EspG 0.54 38.0 2.69e-01 76.4% 65.4%
3608102 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 40.0 4.06e-01 80.6% 84.3%
3429037 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.53 46.0 3.06e-01 100.0% 99.4%
4041632 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.53 39.0 3.23e-01 80.6% 87.6%
None 0.53 39.0 2.46e-01 83.3% 20.0%
5016404 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.53 42.0 4.09e-01 86.1% 85.0%
3443786 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 38.0 3.80e-01 79.2% 81.3%
3746407 5.1.5.64 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DCAF17 0.52 46.0 2.85e-01 100.0% 88.2%
3929295 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 43.0 3.70e-01 100.0% 96.2%
3242056 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 42.0 3.42e-01 95.8% 84.5%
3968468 4152.2.1.0 a+b two layers › Shew3726-like › Uncharacterized protein CV_2116 › Uncharacterized protein CV_2116 0.50 37.0 3.66e-01 80.6% 81.3%