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OP620778.1__WGN97791.1__X__00377

Bact-Vir

OP620778.1__WGN97791.1__X__00377

Identity

Accession:
OP620778 ↗
Kingdom:
phage

Quality

80.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Jeanschmidtviridae› Bertelyvirus› Bertelyvirus_sp.

TaxID: 2832595

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 33-97
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.75 56.0 5.93e-01 100.0% 87.9%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.74 55.0 5.14e-01 100.0% 64.9%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 54.0 5.59e-01 100.0% 85.5%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 44.0 4.73e-01 87.7% 85.2%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 55.0 5.30e-01 98.5% 84.7%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 50.0 5.12e-01 98.5% 90.3%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.63 57.0 5.31e-01 100.0% 87.3%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.61 56.0 4.18e-01 100.0% 51.0%
7w0aA02 2.170.260.10 Mainly Beta › Beta Complex › paz domain › paz domain 0.61 55.0 4.41e-01 100.0% 81.6%
4ii1A01 2.30.30.1190 Mainly Beta › Roll › SH3 type barrels. › 0.61 54.0 5.05e-01 100.0% 92.5%
4bb7B00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.60 54.0 3.64e-01 100.0% 31.6%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 42.0 4.54e-01 86.2% 89.1%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.60 54.0 4.11e-01 100.0% 50.7%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 42.0 4.30e-01 93.8% 78.7%
1jb0E00 2.30.30.50 Mainly Beta › Roll › SH3 type barrels. › 0.59 55.0 5.38e-01 100.0% 94.2%
6vilA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.59 53.0 4.08e-01 100.0% 51.0%
3rmhB00 2.40.50.810 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 47.0 3.81e-01 90.8% 75.9%
2z84A00 3.90.70.130 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.55 46.0 3.37e-01 100.0% 32.9%
2ls0101 2.40.50.670 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Target recognition domain of lytic exoenzyme 0.55 37.0 3.17e-01 89.2% 40.4%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 48.0 3.78e-01 100.0% 62.4%
3n54B01 6.20.190.10 Special › Other non-globular › Nuclear Transport Factor 2; Chain: A, › Nutrient germinant receptor protein C, domain 1 0.54 34.0 3.56e-01 72.3% 68.9%
3h6rA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 44.0 3.48e-01 100.0% 96.1%
1dgsA04 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 42.0 4.07e-01 87.7% 100.0%
2ktyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 44.0 3.52e-01 96.9% 70.9%
6ei1A01 3.90.70.130 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.51 44.0 3.02e-01 100.0% 26.7%
1uapA00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 43.0 3.44e-01 93.8% 68.7%
4bpnW02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.51 37.0 4.11e-01 86.2% 100.0%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.51 33.0 3.46e-01 86.2% 75.4%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 41.0 3.57e-01 90.8% 90.3%
4emtA02 3.40.50.12100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Stimulator of interferon genes protein 0.50 34.0 2.72e-01 92.3% 32.8%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4501723 4.8.1.45 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Peptidase_U57 0.79 57.0 6.19e-01 96.9% 89.1%
3583597 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.79 56.0 4.96e-01 100.0% 53.3%
5017073 4.11.1.0 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.79 59.0 4.44e-01 100.0% 34.7%
3564972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.60e-01 100.0% 75.7%
3507146 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 56.0 5.07e-01 100.0% 61.2%
4929262 4.11.1.2 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.72 61.0 4.53e-01 100.0% 38.1%
3495447 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.72 57.0 4.56e-01 100.0% 45.8%
3555043 4.8.1.1 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.69 45.0 4.31e-01 86.2% 58.7%
3607981 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.34e-01 100.0% 79.7%
3954938 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 51.0 5.19e-01 100.0% 84.6%
3824699 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 53.0 5.38e-01 100.0% 87.7%
3923766 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 58.0 4.80e-01 100.0% 69.6%
3798312 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 52.0 5.15e-01 100.0% 81.4%
4029199 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.65 61.0 3.33e-01 100.0% 7.7%
2725646 4.8.1.29 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SH3_AEBP2_C 0.65 41.0 3.27e-01 84.6% 33.3%
4349149 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.64 57.0 5.10e-01 96.9% 82.2%
2394466 4.8.1.29 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SH3_AEBP2_C 0.64 42.0 3.78e-01 86.2% 50.0%
3905585 4.8.1.29 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SH3_AEBP2_C 0.64 42.0 3.25e-01 86.2% 31.9%
5020252 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.64 45.0 3.72e-01 100.0% 40.8%
3894729 4.1.1.461 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH 0.63 56.0 5.07e-01 100.0% 88.9%
4530545 4.1.1.217 ↗ beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.63 56.0 4.97e-01 100.0% 84.2%
4114383 4.8.1.47 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › zf_CCCH_4 0.63 56.0 5.15e-01 100.0% 94.1%
3521904 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 57.0 4.96e-01 100.0% 74.7%
3460634 4.1.1.25 ↗ beta barrels › SH3 › SH3 › SH3 › PAZ 0.62 57.0 4.35e-01 100.0% 63.6%
3995290 4.1.1.332 ↗ beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.62 54.0 4.59e-01 100.0% 77.3%
3490245 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 56.0 4.99e-01 100.0% 77.8%
3621303 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 56.0 4.37e-01 100.0% 55.4%
3510024 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.61 55.0 4.57e-01 100.0% 77.3%
3501834 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 53.0 4.81e-01 95.4% 81.2%
3595489 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.60 44.0 4.54e-01 89.2% 83.3%
3575867 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.60 54.0 4.21e-01 100.0% 54.3%
4027502 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 45.0 4.54e-01 100.0% 83.1%
4174957 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.59 52.0 3.70e-01 100.0% 39.0%
3517758 2.1.1.106 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PRS7_OB 0.58 50.0 4.62e-01 92.3% 81.2%
5067759 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.58 48.0 4.25e-01 95.4% 68.0%
3612182 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 51.0 4.54e-01 98.5% 94.4%
3672372 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.56 46.0 4.37e-01 89.2% 82.7%
3907176 4.1.1.248 ↗ beta barrels › SH3 › SH3 › SH3 › CABIT 0.55 48.0 4.33e-01 100.0% 71.1%
3230022 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 44.0 4.32e-01 87.7% 95.7%
3495148 219.1.1.41 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 0.54 46.0 3.53e-01 100.0% 42.4%
4572937 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.54 46.0 3.50e-01 100.0% 54.7%
3536187 219.1.1.41 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C78 0.54 45.0 3.65e-01 100.0% 48.6%
4501781 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 46.0 4.07e-01 100.0% 80.0%
3640436 220.1.1.96 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF3292 0.52 45.0 3.43e-01 100.0% 66.3%
5082733 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 34.0 3.69e-01 100.0% 80.0%
3626927 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.51 35.0 3.70e-01 95.4% 85.5%
3927695 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 43.0 2.78e-01 96.9% 24.1%
3672422 223.1.1.8 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › CHASE 0.51 39.0 2.73e-01 90.8% 67.0%
3783352 206.1.1.1 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.51 43.0 2.61e-01 93.8% 29.4%
4444078 243.3.1.5 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.51 41.0 3.46e-01 92.3% 56.5%
3691681 2.1.1.25 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.50 40.0 3.27e-01 90.8% 83.8%