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OP620778.1__WGN97872.1__X__00458

Bact-Vir

OP620778.1__WGN97872.1__X__00458

Identity

Accession:
OP620778 ↗
Kingdom:
phage

Quality

81.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-48
PDB
Domain cluster: representative
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 84.0 7.22e-01 100.0% 65.5%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 84.0 7.31e-01 100.0% 67.9%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 84.0 7.65e-01 100.0% 79.6%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.92 81.0 4.98e-01 100.0% 18.4%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.91 74.0 6.54e-01 92.1% 63.0%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 80.0 6.34e-01 100.0% 52.0%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 80.0 6.75e-01 100.0% 61.9%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 80.0 6.49e-01 100.0% 55.7%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 80.0 6.57e-01 100.0% 56.7%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.90 75.0 7.18e-01 100.0% 80.0%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 79.0 6.39e-01 100.0% 52.8%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 79.0 6.16e-01 100.0% 47.5%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 78.0 6.53e-01 100.0% 62.5%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 76.0 6.83e-01 100.0% 74.1%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 76.0 5.98e-01 100.0% 50.0%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 73.0 6.48e-01 94.7% 65.5%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 75.0 6.30e-01 100.0% 57.6%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.88 75.0 5.38e-01 100.0% 34.9%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 76.0 6.39e-01 100.0% 60.0%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 76.0 6.53e-01 100.0% 65.6%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 75.0 5.75e-01 100.0% 44.8%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.87 73.0 5.54e-01 100.0% 41.5%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 74.0 6.34e-01 100.0% 61.9%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 77.0 6.79e-01 100.0% 72.7%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.86 73.0 5.02e-01 100.0% 29.4%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 72.0 6.47e-01 100.0% 67.9%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.85 72.0 6.36e-01 97.4% 67.9%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 75.0 6.66e-01 100.0% 74.1%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 75.0 6.32e-01 100.0% 66.7%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 73.0 6.17e-01 100.0% 62.5%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 70.0 6.96e-01 94.7% 97.4%
4wcgA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 73.0 6.23e-01 100.0% 65.6%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 70.0 6.51e-01 100.0% 80.0%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 70.0 6.11e-01 100.0% 65.0%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 73.0 5.73e-01 100.0% 57.7%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 71.0 4.87e-01 100.0% 34.1%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 68.0 5.75e-01 100.0% 56.1%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 5.95e-01 100.0% 61.9%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 72.0 5.02e-01 100.0% 33.6%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 70.0 5.30e-01 100.0% 42.2%
2z99A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 5.42e-01 100.0% 47.1%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 5.32e-01 100.0% 42.7%
1biaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 5.88e-01 100.0% 62.5%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 5.76e-01 100.0% 62.0%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 70.0 5.72e-01 100.0% 62.0%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 67.0 6.61e-01 100.0% 90.2%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 70.0 6.41e-01 100.0% 80.0%
1wi9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 70.0 6.10e-01 100.0% 69.0%
2d1hB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 5.12e-01 100.0% 40.8%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 65.0 5.38e-01 100.0% 50.0%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 5.23e-01 100.0% 45.5%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 69.0 5.01e-01 100.0% 38.5%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 5.78e-01 100.0% 61.9%
2isyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 4.60e-01 100.0% 31.9%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.78 67.0 3.83e-01 100.0% 10.7%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.09e-01 100.0% 46.2%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 4.45e-01 100.0% 28.4%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.55e-01 100.0% 58.2%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.43e-01 100.0% 60.3%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 67.0 5.50e-01 100.0% 56.3%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.77 64.0 4.37e-01 100.0% 40.3%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 66.0 6.19e-01 100.0% 85.1%
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 5.50e-01 100.0% 59.1%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.49e-01 100.0% 62.5%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.76 58.0 3.90e-01 89.5% 22.6%
5f7qC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.28e-01 100.0% 55.7%
3mczA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 4.96e-01 100.0% 48.8%
2hr3D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.49e-01 100.0% 61.3%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 5.28e-01 97.4% 61.1%
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 55.0 5.63e-01 89.5% 97.1%
8amzO01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.75 61.0 3.57e-01 100.0% 12.9%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 59.0 5.05e-01 92.1% 55.4%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 64.0 6.03e-01 100.0% 91.5%
4tv7D01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 63.0 4.87e-01 100.0% 51.8%
1mkmB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 4.98e-01 100.0% 53.9%
4p9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 60.0 5.13e-01 100.0% 62.7%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 5.06e-01 92.1% 60.3%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 4.86e-01 100.0% 63.7%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 58.0 4.55e-01 100.0% 42.6%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 4.05e-01 100.0% 29.8%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 64.0 5.45e-01 100.0% 98.3%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 56.0 5.19e-01 97.4% 78.2%
3edpA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.79e-01 100.0% 56.6%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 4.13e-01 100.0% 33.6%
7u32G01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.68 51.0 4.69e-01 97.4% 60.7%
3lmmC04 1.10.10.2340 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 51.0 4.22e-01 100.0% 46.0%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 57.0 5.16e-01 100.0% 73.1%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5043242 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.98 92.0 6.81e-01 100.0% 45.2%
4990647 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 86.0 7.46e-01 97.4% 67.3%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.95 87.0 6.39e-01 100.0% 42.2%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 86.0 7.31e-01 100.0% 63.3%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 87.0 6.94e-01 100.0% 54.3%
4963466 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.95 86.0 8.05e-01 97.4% 82.2%
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 86.0 6.97e-01 97.4% 56.9%
5011648 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.95 85.0 7.68e-01 97.4% 74.0%
4992594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 85.0 8.00e-01 97.4% 82.2%
3090474 4020.1.1.0 a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.95 86.0 5.67e-01 100.0% 28.3%
3602714 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.95 85.0 8.34e-01 97.4% 92.5%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 83.0 7.54e-01 97.4% 74.0%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 81.0 6.87e-01 94.7% 60.0%
4987929 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.94 86.0 7.23e-01 100.0% 65.0%
4081344 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.94 77.0 8.07e-01 89.5% 100.0%
4963467 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.94 84.0 7.89e-01 97.4% 82.2%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.94 83.0 7.23e-01 97.4% 67.3%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 84.0 7.39e-01 100.0% 69.1%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 84.0 7.87e-01 97.4% 82.2%
5070618 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 84.0 7.66e-01 100.0% 78.0%
4960928 101.1.3.16 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4 0.93 85.0 7.16e-01 100.0% 65.0%
3942514 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.93 83.0 7.55e-01 100.0% 76.0%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.93 83.0 7.08e-01 100.0% 63.3%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.93 82.0 7.72e-01 100.0% 82.2%
3787936 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 79.0 6.77e-01 100.0% 61.7%
5019249 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.91 81.0 6.17e-01 100.0% 44.7%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.91 80.0 6.28e-01 100.0% 49.3%
5011649 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 77.0 7.29e-01 94.7% 80.0%
5036394 101.1.9.152 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_28 0.91 78.0 4.96e-01 97.4% 21.8%
3590541 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.91 80.0 5.04e-01 100.0% 21.1%
4978144 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.90 81.0 6.92e-01 100.0% 66.7%
4008046 101.1.1.348 alpha arrays › HTH › HTH › Three-helical HTH › PF30461 0.90 83.0 7.45e-01 100.0% 80.0%
5016985 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 77.0 7.26e-01 97.4% 80.0%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.90 79.0 7.22e-01 100.0% 76.0%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.90 76.0 6.31e-01 100.0% 55.4%
4947365 101.1.2.873 alpha arrays › HTH › HTH › winged helix domain › AsnC_trans_reg 0.90 81.0 7.32e-01 100.0% 80.0%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 76.0 6.51e-01 97.4% 60.0%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 78.0 6.24e-01 100.0% 50.7%
5053647 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.90 80.0 7.04e-01 100.0% 72.7%
3942478 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 79.0 6.97e-01 100.0% 69.1%
4458444 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.90 78.0 5.80e-01 100.0% 40.0%
4031116 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 80.0 6.82e-01 100.0% 63.3%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.89 78.0 5.99e-01 100.0% 44.7%
4034200 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.89 77.0 6.47e-01 100.0% 58.5%
4946254 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 76.0 7.25e-01 97.4% 82.2%
5002776 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 79.0 6.14e-01 100.0% 47.5%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.89 76.0 5.53e-01 100.0% 36.2%
4957415 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.88 75.0 6.55e-01 100.0% 63.3%
3409145 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.88 74.0 6.77e-01 100.0% 72.0%
3890615 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 75.0 6.92e-01 97.4% 74.0%
4175748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.88 76.0 5.98e-01 100.0% 50.0%
4952294 101.1.2.870 alpha arrays › HTH › HTH › winged helix domain › GerE 0.88 78.0 6.85e-01 100.0% 69.1%
4938253 101.1.1.9 alpha arrays › HTH › HTH › Three-helical HTH › HTH_3 0.88 76.0 7.53e-01 97.4% 95.0%
5052610 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.87 78.0 6.64e-01 100.0% 66.7%
4980059 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.87 78.0 7.09e-01 100.0% 80.0%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.87 73.0 6.95e-01 94.7% 80.0%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.87 74.0 6.13e-01 100.0% 54.3%
4610234 101.1.2.89 alpha arrays › HTH › HTH › winged helix domain › HTH_DeoR 0.87 75.0 6.42e-01 97.4% 65.0%
4002905 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 74.0 6.22e-01 100.0% 58.5%
3603081 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.86 75.0 5.92e-01 97.4% 50.7%
4964807 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.85 76.0 6.66e-01 100.0% 72.7%
4963527 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.85 77.0 5.62e-01 100.0% 42.1%
5014584 101.1.2.932 alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc 0.85 75.0 5.73e-01 100.0% 45.9%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 69.0 6.60e-01 97.4% 80.0%
3794969 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 74.0 6.83e-01 100.0% 80.0%
4937081 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 72.0 6.10e-01 100.0% 58.5%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.84 68.0 5.80e-01 100.0% 55.4%
5046294 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.84 74.0 6.54e-01 100.0% 72.7%
3509592 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.84 70.0 6.12e-01 100.0% 61.7%
3502245 101.1.6.13 alpha arrays › HTH › HTH › TrpR › HTH_28 0.84 72.0 6.85e-01 100.0% 86.7%
4956784 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 74.0 6.01e-01 100.0% 57.1%
3938920 101.1.1.397 alpha arrays › HTH › HTH › Three-helical HTH › PF30176 0.83 71.0 6.77e-01 97.4% 86.7%
4965520 101.1.1.556 alpha arrays › HTH › HTH › Three-helical HTH › DUF7317 0.83 72.0 6.34e-01 97.4% 69.1%
5014241 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.82 70.0 5.43e-01 97.4% 44.7%
5046692 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 71.0 6.72e-01 100.0% 86.7%
3985435 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 65.0 6.49e-01 97.4% 95.0%
4987329 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.80 68.0 5.29e-01 97.4% 43.5%
4994911 101.1.2.222 alpha arrays › HTH › HTH › winged helix domain › PH0730-like_N 0.80 65.0 5.29e-01 100.0% 48.0%
5045749 101.1.11.203 alpha arrays › HTH › HTH › Ribbon-helix-helix › UPF0175 0.79 66.0 5.60e-01 97.4% 58.5%
5052578 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.79 66.0 6.53e-01 97.4% 92.5%
3949663 101.1.1.307 alpha arrays › HTH › HTH › Three-helical HTH › DUF3071 0.79 61.0 6.05e-01 94.7% 85.0%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 66.0 5.73e-01 100.0% 66.7%
4980944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 64.0 5.12e-01 100.0% 48.8%
3588540 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.73 58.0 5.36e-01 97.4% 74.5%
3967284 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 58.0 5.19e-01 97.4% 61.7%
3590374 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 57.0 5.25e-01 97.4% 74.5%
D2 medium residues 60-94
PDB
Domain cluster: representative
CATH (93)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.97 86.0 7.32e-01 100.0% 63.0%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.97 88.0 7.51e-01 100.0% 66.7%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.97 88.0 7.36e-01 100.0% 62.5%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.97 88.0 6.74e-01 100.0% 48.6%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.97 88.0 7.07e-01 100.0% 57.1%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 86.0 6.45e-01 100.0% 43.8%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 86.0 7.15e-01 100.0% 60.3%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 85.0 6.84e-01 100.0% 55.4%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 85.0 6.99e-01 100.0% 59.0%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 86.0 6.84e-01 100.0% 53.0%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.95 85.0 7.79e-01 100.0% 77.8%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 84.0 6.68e-01 100.0% 52.2%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 84.0 6.71e-01 100.0% 52.2%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 84.0 6.41e-01 100.0% 46.7%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.94 83.0 4.99e-01 100.0% 17.0%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 83.0 5.77e-01 100.0% 34.3%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 82.0 6.90e-01 100.0% 60.3%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 82.0 6.18e-01 100.0% 46.3%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 81.0 6.39e-01 100.0% 50.0%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 81.0 6.58e-01 100.0% 56.2%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 81.0 6.60e-01 100.0% 55.6%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 80.0 6.69e-01 100.0% 60.0%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.91 78.0 6.07e-01 100.0% 46.1%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.91 80.0 6.85e-01 100.0% 63.6%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.91 79.0 6.75e-01 100.0% 62.5%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.91 79.0 5.29e-01 100.0% 27.8%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 78.0 5.83e-01 100.0% 41.4%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.89 76.0 5.00e-01 100.0% 25.5%
4jp0A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 72.0 7.31e-01 97.1% 97.1%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.88 77.0 5.13e-01 100.0% 27.5%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 75.0 6.48e-01 100.0% 62.5%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.88 75.0 6.70e-01 100.0% 68.6%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.88 75.0 6.08e-01 100.0% 52.9%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 76.0 5.70e-01 100.0% 41.2%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.87 72.0 4.68e-01 97.1% 22.6%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.86 76.0 4.47e-01 100.0% 14.1%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 72.0 5.41e-01 100.0% 40.9%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 73.0 5.41e-01 100.0% 38.9%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 73.0 6.02e-01 100.0% 61.9%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.84 69.0 5.15e-01 100.0% 38.3%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.83 70.0 6.77e-01 100.0% 90.2%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 68.0 5.68e-01 100.0% 53.0%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 70.0 5.77e-01 100.0% 57.8%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 6.07e-01 100.0% 68.5%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 71.0 5.66e-01 100.0% 52.9%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 5.78e-01 100.0% 58.7%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 6.08e-01 100.0% 74.0%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 5.74e-01 100.0% 57.1%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.81 71.0 5.46e-01 100.0% 47.4%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 67.0 5.92e-01 100.0% 67.3%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.80 69.0 5.64e-01 100.0% 55.4%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 5.58e-01 100.0% 55.2%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 65.0 6.04e-01 97.1% 76.6%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 67.0 4.69e-01 100.0% 31.9%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 65.0 6.19e-01 100.0% 81.8%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 4.72e-01 100.0% 35.6%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 67.0 5.64e-01 100.0% 60.0%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 67.0 5.34e-01 100.0% 59.2%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 66.0 5.37e-01 97.1% 54.5%
1on2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 5.26e-01 100.0% 56.9%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 6.28e-01 100.0% 94.9%
7xi5A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 66.0 5.86e-01 97.1% 68.6%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 64.0 4.39e-01 100.0% 31.8%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 5.74e-01 100.0% 74.0%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 61.0 5.65e-01 91.4% 87.0%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 4.83e-01 100.0% 40.9%
2ppxA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 63.0 5.39e-01 100.0% 60.7%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 63.0 4.93e-01 97.1% 49.3%
3cecA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 62.0 4.64e-01 97.1% 39.6%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 63.0 5.29e-01 97.1% 98.3%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 4.99e-01 100.0% 56.2%
3g7dA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 59.0 4.47e-01 91.4% 40.7%
4gqmA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 61.0 4.36e-01 97.1% 34.3%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 58.0 4.57e-01 100.0% 42.5%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 62.0 5.15e-01 100.0% 70.3%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 61.0 4.97e-01 100.0% 54.4%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 60.0 5.28e-01 100.0% 74.5%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.72 63.0 4.00e-01 100.0% 28.2%
2y75A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 57.0 4.08e-01 100.0% 32.0%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 58.0 4.42e-01 100.0% 39.4%
2v9kA01 1.10.10.2050 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.71 59.0 5.32e-01 97.1% 92.0%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.70 54.0 5.11e-01 94.3% 76.1%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 57.0 4.53e-01 100.0% 61.3%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 56.0 4.70e-01 100.0% 53.6%
4xviA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.70 52.0 3.70e-01 100.0% 25.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 3.83e-01 100.0% 28.4%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 49.0 4.33e-01 82.9% 55.2%
4yg1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 54.0 4.45e-01 100.0% 52.8%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.67 50.0 4.90e-01 94.3% 85.4%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.67 58.0 3.71e-01 100.0% 26.0%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.66 52.0 3.64e-01 100.0% 38.9%
4x0qA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.65 49.0 3.46e-01 97.1% 38.2%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 54.0 4.12e-01 100.0% 42.5%
ECOD (99)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.99 93.0 6.94e-01 100.0% 46.7%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.99 91.0 8.29e-01 100.0% 77.8%
3942922 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.99 89.0 6.66e-01 97.1% 45.3%
5078377 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.98 90.0 7.86e-01 100.0% 70.0%
4250487 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.98 85.0 8.59e-01 94.3% 94.3%
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.98 90.0 8.58e-01 100.0% 87.5%
4997092 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.98 90.0 6.93e-01 100.0% 50.0%
4946254 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.98 90.0 8.18e-01 100.0% 77.8%
3944309 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 90.0 7.83e-01 100.0% 70.0%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.98 89.0 8.14e-01 100.0% 77.8%
5002577 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.97 89.0 5.89e-01 100.0% 29.2%
3290024 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 88.0 6.57e-01 100.0% 43.8%
3942695 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 88.0 7.02e-01 100.0% 53.8%
5011648 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.97 88.0 7.73e-01 100.0% 70.0%
4395941 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.97 86.0 8.61e-01 97.1% 97.1%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.97 88.0 6.99e-01 100.0% 53.8%
3590541 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.97 88.0 5.38e-01 100.0% 19.4%
3942478 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 88.0 7.43e-01 100.0% 63.6%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.96 88.0 8.03e-01 100.0% 77.8%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 88.0 8.03e-01 100.0% 77.8%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.96 87.0 7.39e-01 100.0% 63.6%
5056682 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 87.0 6.76e-01 100.0% 50.0%
4470400 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 87.0 6.77e-01 100.0% 50.0%
4458444 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.96 87.0 6.17e-01 100.0% 36.8%
4034200 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.96 86.0 6.91e-01 100.0% 53.8%
4929382 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 86.0 7.32e-01 100.0% 63.6%
5043242 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.96 87.0 6.39e-01 100.0% 41.7%
4081344 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.96 84.0 8.55e-01 97.1% 100.0%
3991300 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 87.0 6.47e-01 100.0% 43.8%
4986612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.96 86.0 7.87e-01 100.0% 77.8%
5043001 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.96 86.0 5.95e-01 100.0% 33.3%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 86.0 6.55e-01 100.0% 46.7%
3988145 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.96 86.0 7.58e-01 100.0% 70.0%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.96 86.0 7.06e-01 100.0% 58.3%
4289285 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.96 86.0 6.21e-01 100.0% 40.0%
5057202 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.95 85.0 6.66e-01 100.0% 50.0%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.95 83.0 7.96e-01 97.1% 85.0%
3278040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 86.0 7.05e-01 100.0% 58.3%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.95 85.0 6.48e-01 100.0% 46.7%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.94 84.0 6.76e-01 100.0% 53.8%
3972270 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.94 84.0 6.56e-01 100.0% 50.0%
4993585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 83.0 6.91e-01 100.0% 58.3%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 84.0 6.75e-01 100.0% 53.8%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.94 83.0 7.94e-01 100.0% 87.5%
3945880 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.93 82.0 7.04e-01 100.0% 63.6%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.93 82.0 7.27e-01 100.0% 70.0%
4969699 101.1.6.40 alpha arrays › HTH › HTH › TrpR › DUF1670 0.93 81.0 6.16e-01 100.0% 43.8%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.93 81.0 6.28e-01 100.0% 46.7%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.92 81.0 6.76e-01 100.0% 58.3%
3588551 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.92 81.0 6.77e-01 100.0% 58.3%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.92 80.0 6.69e-01 100.0% 58.3%
3706139 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 80.0 7.13e-01 100.0% 70.0%
4957415 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.92 80.0 6.69e-01 100.0% 58.3%
3640035 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 80.0 5.96e-01 100.0% 41.2%
3701286 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.92 80.0 7.12e-01 100.0% 70.0%
2759 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.92 81.0 6.53e-01 100.0% 53.8%
3204806 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.92 79.0 7.37e-01 100.0% 77.8%
3693390 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.91 79.0 6.65e-01 100.0% 58.3%
3288236 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.91 82.0 5.96e-01 100.0% 40.0%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.91 80.0 6.28e-01 100.0% 49.3%
4992594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 78.0 7.24e-01 100.0% 77.8%
2761 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.90 78.0 5.83e-01 100.0% 41.4%
3890615 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.90 79.0 7.02e-01 100.0% 70.0%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.90 76.0 7.46e-01 97.1% 89.5%
3232498 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 77.0 6.17e-01 100.0% 50.0%
3282047 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.90 79.0 5.62e-01 100.0% 36.0%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.89 77.0 6.50e-01 100.0% 58.3%
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 77.0 6.29e-01 100.0% 53.8%
3281819 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.89 76.0 5.82e-01 100.0% 43.8%
5077769 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.89 78.0 6.95e-01 100.0% 70.0%
4043241 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.89 77.0 5.86e-01 100.0% 45.0%
3587644 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.88 76.0 6.42e-01 100.0% 58.3%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 75.0 6.37e-01 100.0% 58.3%
3597464 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 74.0 6.30e-01 100.0% 63.3%
3288492 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.88 76.0 7.05e-01 100.0% 80.0%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.88 75.0 7.00e-01 100.0% 77.8%
4309654 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.87 76.0 6.54e-01 100.0% 65.5%
4142399 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.87 76.0 5.59e-01 100.0% 40.0%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.87 75.0 6.00e-01 100.0% 50.0%
3243649 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 75.0 5.55e-01 100.0% 38.9%
3718418 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 72.0 5.47e-01 100.0% 44.7%
4262428 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.85 73.0 4.22e-01 100.0% 11.3%
4143289 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 71.0 6.28e-01 100.0% 63.6%
4560931 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 70.0 5.57e-01 100.0% 46.7%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.85 72.0 4.26e-01 100.0% 12.8%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 72.0 6.28e-01 100.0% 63.6%
3632861 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 72.0 6.67e-01 100.0% 77.8%
3948900 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 71.0 5.62e-01 100.0% 48.0%
5052578 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.84 70.0 6.76e-01 97.1% 87.5%
5007028 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 71.0 6.19e-01 100.0% 63.6%
4010017 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.84 70.0 5.69e-01 100.0% 50.0%
5051680 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.83 71.0 5.46e-01 100.0% 45.0%
3279330 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.82 67.0 5.40e-01 100.0% 46.7%
3985435 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 67.0 6.52e-01 100.0% 90.0%
3707219 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.81 70.0 4.83e-01 100.0% 29.2%
5030780 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 64.0 5.96e-01 100.0% 70.0%
3338097 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 69.0 5.95e-01 100.0% 67.3%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 63.0 5.53e-01 100.0% 60.0%
5047812 101.29.1.0 alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like 0.76 66.0 5.58e-01 100.0% 58.3%
D3 medium residues 107-141
PDB
Domain cluster: representative
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.98 89.0 6.62e-01 100.0% 43.8%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.98 89.0 7.46e-01 100.0% 62.5%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.98 87.0 7.39e-01 97.1% 63.0%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.97 88.0 5.78e-01 100.0% 27.8%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.97 87.0 7.26e-01 100.0% 60.3%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.97 88.0 6.74e-01 100.0% 48.6%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 87.0 7.11e-01 100.0% 59.0%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.96 87.0 5.21e-01 100.0% 17.0%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 87.0 7.00e-01 100.0% 57.1%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.96 87.0 6.93e-01 100.0% 55.4%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 85.0 7.29e-01 100.0% 66.7%
2q0oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 85.0 6.76e-01 100.0% 52.2%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 85.0 6.63e-01 100.0% 50.0%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.95 84.0 6.45e-01 100.0% 46.7%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 85.0 6.85e-01 100.0% 55.6%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.94 84.0 6.68e-01 100.0% 53.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 83.0 6.23e-01 100.0% 46.3%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.93 84.0 6.64e-01 100.0% 52.2%
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 82.0 5.69e-01 100.0% 34.3%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.92 81.0 7.49e-01 100.0% 77.8%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 81.0 6.81e-01 100.0% 60.3%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 81.0 6.57e-01 100.0% 56.2%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 80.0 6.17e-01 100.0% 46.1%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.90 80.0 6.80e-01 100.0% 62.5%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.90 77.0 5.07e-01 100.0% 25.5%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.90 78.0 5.78e-01 100.0% 40.2%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.90 79.0 5.25e-01 100.0% 27.5%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.90 76.0 6.59e-01 100.0% 62.5%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.89 77.0 6.65e-01 100.0% 63.6%
4ha8A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 77.0 6.30e-01 100.0% 61.9%
5y2vC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 76.0 5.70e-01 100.0% 41.2%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 75.0 5.57e-01 100.0% 39.3%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 74.0 6.62e-01 100.0% 68.6%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 74.0 5.63e-01 100.0% 42.7%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 71.0 5.46e-01 100.0% 43.5%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.86 74.0 4.38e-01 100.0% 14.1%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 74.0 6.12e-01 100.0% 58.7%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.85 71.0 4.63e-01 97.1% 21.9%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 73.0 5.97e-01 100.0% 53.0%
6hn7B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 61.0 4.76e-01 77.1% 37.5%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 74.0 6.10e-01 100.0% 57.1%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 74.0 6.42e-01 100.0% 68.5%
2qlzA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 74.0 6.12e-01 100.0% 58.7%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 74.0 4.77e-01 100.0% 24.2%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 74.0 6.03e-01 100.0% 57.8%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.84 73.0 5.31e-01 100.0% 42.6%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 70.0 5.80e-01 100.0% 53.0%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 70.0 5.27e-01 100.0% 40.9%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 72.0 5.71e-01 100.0% 51.4%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 73.0 5.85e-01 100.0% 55.2%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.83 69.0 5.13e-01 100.0% 38.3%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 72.0 5.10e-01 100.0% 35.6%
1xd7A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 71.0 4.93e-01 100.0% 31.9%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 69.0 6.28e-01 100.0% 74.0%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 72.0 6.22e-01 100.0% 67.3%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 72.0 5.39e-01 100.0% 45.9%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.82 69.0 6.66e-01 100.0% 90.2%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 70.0 4.64e-01 100.0% 26.4%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 69.0 6.25e-01 100.0% 74.0%
2h09A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 5.63e-01 100.0% 59.2%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 69.0 5.55e-01 100.0% 52.9%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 5.33e-01 100.0% 63.3%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.80 64.0 4.79e-01 100.0% 35.6%
2x4hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 69.0 4.68e-01 100.0% 31.8%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 66.0 6.30e-01 100.0% 81.8%
2gloA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 64.0 5.63e-01 100.0% 66.1%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 67.0 6.58e-01 100.0% 94.9%
2hyjA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 64.0 5.92e-01 91.4% 87.0%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 68.0 5.40e-01 100.0% 57.5%
2x26A01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.78 66.0 4.10e-01 94.3% 72.4%
2h6bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 70.0 4.98e-01 100.0% 53.1%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 57.0 4.87e-01 82.9% 53.4%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 5.19e-01 100.0% 53.6%
3dv8A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 5.16e-01 100.0% 57.7%
3bd1A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.76 61.0 5.01e-01 91.4% 50.8%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 4.98e-01 100.0% 46.9%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 5.60e-01 100.0% 71.2%
5fo5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 4.64e-01 100.0% 40.9%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 65.0 5.42e-01 100.0% 100.0%
3k69A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 4.01e-01 100.0% 26.0%
7vw6B01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.73 58.0 4.93e-01 100.0% 65.7%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 4.13e-01 100.0% 28.4%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 4.75e-01 100.0% 65.0%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.70 57.0 4.81e-01 97.1% 60.0%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.69 55.0 5.26e-01 100.0% 78.3%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.65 49.0 4.87e-01 100.0% 87.8%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 50.0 3.94e-01 100.0% 42.5%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4976095 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 1.00 94.0 7.82e-01 100.0% 63.6%
4986612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 1.00 94.0 8.46e-01 100.0% 77.8%
3968151 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.99 91.0 6.59e-01 100.0% 41.2%
3279743 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 91.0 7.00e-01 100.0% 50.0%
3979166 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.98 91.0 7.00e-01 100.0% 50.0%
4245572 101.1.8.16 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › HTH_40 0.98 91.0 6.99e-01 100.0% 50.0%
1546121 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.98 90.0 6.82e-01 100.0% 46.7%
4458444 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.98 91.0 6.36e-01 100.0% 36.8%
4214308 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 91.0 6.56e-01 100.0% 41.2%
4492035 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 91.0 6.98e-01 100.0% 50.0%
3962552 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.98 90.0 6.80e-01 100.0% 46.7%
3278040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.98 90.0 7.35e-01 100.0% 58.3%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 90.0 6.77e-01 100.0% 46.7%
142817 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 90.0 6.86e-01 100.0% 48.6%
4486944 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.98 85.0 5.18e-01 94.3% 18.3%
3288310 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 89.0 6.91e-01 100.0% 50.0%
3945377 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 89.0 7.09e-01 100.0% 53.8%
3971414 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 89.0 7.29e-01 100.0% 58.3%
4661582 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.98 89.0 6.04e-01 100.0% 31.8%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.97 89.0 7.51e-01 100.0% 63.6%
3944309 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 89.0 7.76e-01 100.0% 70.0%
5043242 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.97 89.0 6.51e-01 100.0% 41.7%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.97 89.0 7.23e-01 100.0% 58.3%
4131887 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 88.0 6.57e-01 100.0% 44.3%
4030763 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 88.0 7.00e-01 100.0% 53.8%
3942478 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 88.0 7.43e-01 100.0% 63.6%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.97 88.0 7.01e-01 100.0% 53.8%
3975610 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.97 88.0 6.81e-01 100.0% 50.0%
5070354 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.97 88.0 6.53e-01 100.0% 43.8%
4937081 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 87.0 6.95e-01 100.0% 53.8%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.96 87.0 6.38e-01 100.0% 41.2%
3944331 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.96 87.0 6.49e-01 100.0% 43.8%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.96 87.0 6.01e-01 100.0% 33.3%
4541333 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 87.0 7.65e-01 100.0% 72.0%
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.96 87.0 8.34e-01 100.0% 87.5%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.96 87.0 6.60e-01 100.0% 46.7%
4946254 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 86.0 7.86e-01 100.0% 77.8%
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 85.0 8.17e-01 100.0% 87.5%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 85.0 6.50e-01 100.0% 46.7%
3287232 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 86.0 6.52e-01 100.0% 46.7%
3947091 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.95 85.0 7.03e-01 100.0% 58.3%
5036394 101.1.9.152 alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_28 0.95 83.0 5.15e-01 97.1% 20.0%
3288090 101.1.1.31 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4 0.95 86.0 6.67e-01 100.0% 51.4%
4260337 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.95 85.0 6.03e-01 100.0% 36.8%
4034200 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.95 84.0 6.77e-01 100.0% 53.8%
4968313 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.95 85.0 6.35e-01 100.0% 43.8%
3602714 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.94 84.0 8.08e-01 100.0% 87.5%
3289034 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.94 84.0 6.83e-01 100.0% 55.6%
3991300 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 85.0 6.34e-01 100.0% 43.8%
3283589 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.94 83.0 7.38e-01 100.0% 70.0%
4321251 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.94 84.0 6.32e-01 100.0% 44.3%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.94 85.0 7.47e-01 100.0% 70.0%
5057202 101.1.3.8 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4_2 0.94 84.0 6.56e-01 100.0% 50.0%
4404485 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.94 84.0 6.91e-01 100.0% 58.3%
4007717 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.93 82.0 6.20e-01 100.0% 43.8%
4395941 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.93 79.0 7.99e-01 97.1% 97.1%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.93 81.0 6.76e-01 100.0% 58.3%
3962903 101.1.2.486 alpha arrays › HTH › HTH › winged helix domain › HTH_58 0.93 81.0 7.82e-01 100.0% 87.5%
4081344 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.91 78.0 7.91e-01 97.1% 100.0%
3945880 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.91 82.0 6.97e-01 100.0% 63.6%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.90 79.0 6.11e-01 100.0% 46.7%
3706139 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 78.0 6.98e-01 100.0% 72.0%
5003692 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.89 77.0 6.31e-01 100.0% 53.8%
3990848 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 77.0 6.69e-01 100.0% 63.6%
3640035 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 76.0 5.76e-01 100.0% 42.4%
3204806 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 76.0 7.09e-01 100.0% 80.0%
5020331 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 76.0 6.25e-01 100.0% 53.8%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.89 77.0 6.10e-01 100.0% 49.3%
3589192 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.88 76.0 5.80e-01 100.0% 43.8%
5074438 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 76.0 7.37e-01 100.0% 90.0%
5004314 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.88 75.0 5.86e-01 100.0% 46.7%
4968186 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.87 76.0 6.97e-01 97.1% 75.6%
4992594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 73.0 6.87e-01 100.0% 77.8%
3981688 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 73.0 6.03e-01 100.0% 53.8%
3477795 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.86 72.0 6.77e-01 100.0% 77.8%
3590303 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.86 72.0 5.71e-01 100.0% 46.7%
4926890 101.1.2.140 alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type 0.86 72.0 5.42e-01 100.0% 41.1%
4977403 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 74.0 6.21e-01 100.0% 58.3%
5045567 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 73.0 5.60e-01 100.0% 43.8%
5059633 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.85 72.0 6.32e-01 100.0% 65.5%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 74.0 6.20e-01 100.0% 60.0%
3588551 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.85 71.0 6.11e-01 100.0% 58.3%
5052142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 73.0 6.82e-01 100.0% 77.8%
3502245 101.1.6.13 alpha arrays › HTH › HTH › TrpR › HTH_28 0.85 72.0 6.70e-01 100.0% 80.0%
5077607 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.84 73.0 6.17e-01 100.0% 61.7%
5074942 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.84 70.0 5.46e-01 94.3% 46.7%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 71.0 6.25e-01 100.0% 63.6%
3389609 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.84 71.0 5.75e-01 100.0% 51.4%
3948900 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.84 72.0 5.64e-01 100.0% 62.7%
5070618 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 71.0 6.38e-01 100.0% 72.0%
4980944 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 67.0 5.31e-01 100.0% 46.3%
5052578 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.82 66.0 6.41e-01 94.3% 87.5%
3998880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 68.0 5.07e-01 100.0% 37.9%
5065596 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.79 66.0 5.16e-01 100.0% 48.8%
5062514 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.78 66.0 6.21e-01 100.0% 86.7%
4090141 101.1.1.494 alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.78 67.0 5.65e-01 100.0% 60.0%
5047812 101.29.1.0 alpha arrays › HTH › helical bundles in heme iron utilization protein-like › helical bundles in heme iron utilization protein-like 0.78 66.0 5.60e-01 100.0% 58.3%
4966252 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.76 58.0 5.85e-01 91.4% 97.1%
D4 medium residues 217-251
PDB
Domain cluster: representative
CATH (83)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s7oB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.92 83.0 5.74e-01 100.0% 33.3%
5fgmA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.89 79.0 6.36e-01 100.0% 53.8%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.89 77.0 5.05e-01 100.0% 24.6%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.88 74.0 6.31e-01 100.0% 58.6%
4nqwA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 75.0 6.18e-01 100.0% 54.7%
2w7nA00 1.10.10.2690 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.87 75.0 5.46e-01 100.0% 37.2%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.87 72.0 6.35e-01 100.0% 63.0%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 75.0 5.76e-01 100.0% 43.8%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 74.0 6.27e-01 100.0% 58.3%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.87 73.0 5.73e-01 100.0% 45.3%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 72.0 5.80e-01 100.0% 48.6%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 75.0 6.25e-01 100.0% 57.4%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.86 73.0 4.83e-01 100.0% 24.8%
2elhA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 71.0 5.84e-01 100.0% 51.5%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 73.0 6.39e-01 100.0% 64.8%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.86 70.0 6.57e-01 100.0% 75.6%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.86 70.0 6.11e-01 100.0% 60.7%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 71.0 5.79e-01 100.0% 50.7%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 70.0 5.61e-01 100.0% 47.2%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 70.0 5.39e-01 100.0% 42.5%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.83 69.0 4.24e-01 100.0% 16.5%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 69.0 6.24e-01 100.0% 69.4%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 68.0 5.72e-01 100.0% 54.0%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 68.0 5.86e-01 100.0% 58.6%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.82 65.0 4.55e-01 100.0% 27.0%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 5.49e-01 100.0% 51.5%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.81 64.0 4.25e-01 100.0% 21.9%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.80 69.0 5.07e-01 100.0% 38.3%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 63.0 5.64e-01 100.0% 61.8%
2jn6A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 61.0 4.87e-01 100.0% 42.4%
8dtqA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 68.0 5.17e-01 100.0% 42.7%
2hinA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 65.0 5.25e-01 100.0% 50.0%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 64.0 5.46e-01 100.0% 56.7%
2mqkA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 66.0 5.45e-01 100.0% 60.0%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 4.91e-01 100.0% 39.8%
2a6cA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.78 66.0 5.22e-01 100.0% 46.1%
6rnzA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 66.0 5.41e-01 100.0% 53.0%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 62.0 5.23e-01 100.0% 51.5%
2ictA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 66.0 5.06e-01 100.0% 43.2%
1r69A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 66.0 5.48e-01 100.0% 57.1%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 68.0 5.81e-01 100.0% 65.5%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 59.0 4.81e-01 100.0% 44.7%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 61.0 5.40e-01 100.0% 60.7%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 62.0 5.23e-01 100.0% 53.8%
4u7bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 6.44e-01 100.0% 92.3%
3ivpD01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.75 62.0 4.96e-01 100.0% 48.0%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.75 64.0 4.37e-01 100.0% 26.7%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.80e-01 100.0% 72.0%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 63.0 5.55e-01 100.0% 66.7%
6f8hC00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.74 61.0 4.61e-01 100.0% 39.8%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 58.0 5.67e-01 100.0% 87.8%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.73 58.0 3.54e-01 100.0% 14.1%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 5.19e-01 100.0% 55.6%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 58.0 5.50e-01 100.0% 74.5%
5eriA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 61.0 4.04e-01 100.0% 23.5%
4gqmA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.72 59.0 4.30e-01 100.0% 33.3%
3i71B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 51.0 4.47e-01 85.7% 48.3%
7vjmB01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.71 60.0 5.02e-01 100.0% 67.2%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.71 63.0 3.85e-01 100.0% 19.5%
2h6bA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 62.0 4.51e-01 100.0% 50.0%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 53.0 4.08e-01 100.0% 37.9%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.70 56.0 5.47e-01 100.0% 97.6%
2k9qA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 56.0 5.47e-01 97.1% 87.5%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.70 57.0 4.90e-01 100.0% 59.0%
1c0wA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.56e-01 100.0% 54.8%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 52.0 5.07e-01 100.0% 81.8%
2fjrA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.68 57.0 4.51e-01 97.1% 48.7%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 57.0 4.71e-01 100.0% 53.7%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.68 56.0 3.83e-01 100.0% 38.2%
5wxuD01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.67 59.0 3.55e-01 100.0% 17.9%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 54.0 4.87e-01 100.0% 72.7%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 3.78e-01 100.0% 27.0%
1s6lA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 58.0 5.10e-01 100.0% 67.3%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.51e-01 100.0% 52.2%
4xviA01 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.66 51.0 3.53e-01 100.0% 25.0%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.65 50.0 4.74e-01 97.1% 76.1%
3sdgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 52.0 5.02e-01 97.1% 97.6%
5cz2G00 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.64 47.0 4.60e-01 100.0% 78.0%
7u32G01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.63 50.0 4.49e-01 97.1% 62.5%
2dg8D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.63 51.0 3.34e-01 97.1% 23.7%
2mtzA01 3.10.350.10 Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain 0.62 47.0 4.44e-01 100.0% 86.0%
3s5rB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 45.0 2.99e-01 100.0% 23.0%
2ao9I01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.58 44.0 3.58e-01 100.0% 41.4%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.95 84.0 7.39e-01 100.0% 68.0%
3922450 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 81.0 7.77e-01 100.0% 85.0%
3278077 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.94 82.0 6.77e-01 100.0% 56.7%
3741290 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.94 81.0 5.89e-01 100.0% 37.8%
5063318 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.94 81.0 6.91e-01 100.0% 61.8%
4385054 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.93 79.0 7.55e-01 97.1% 82.5%
4944887 101.1.1.546 alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.93 80.0 5.40e-01 100.0% 28.3%
3602714 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.93 79.0 7.64e-01 100.0% 85.0%
4148347 101.1.1.26 alpha arrays › HTH › HTH › Three-helical HTH › UPF0122 0.92 83.0 5.77e-01 100.0% 33.7%
4945127 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.91 81.0 5.98e-01 100.0% 41.2%
4960928 101.1.3.16 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r4 0.91 78.0 6.48e-01 100.0% 56.7%
3943462 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 76.0 6.59e-01 100.0% 61.8%
3090474 4020.1.1.0 a+b two layers › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes › a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes 0.90 76.0 5.01e-01 100.0% 24.6%
5070906 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.90 78.0 6.56e-01 100.0% 58.3%
4383273 101.1.1.201 alpha arrays › HTH › HTH › Three-helical HTH › Bot1p 0.90 78.0 5.13e-01 100.0% 25.5%
4334657 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.89 74.0 6.93e-01 100.0% 75.6%
3988724 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 74.0 6.27e-01 100.0% 56.7%
5058447 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 77.0 6.56e-01 97.1% 63.6%
4198219 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.88 74.0 6.86e-01 100.0% 75.6%
5045632 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.88 73.0 6.51e-01 94.3% 66.0%
3409145 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.88 73.0 6.56e-01 100.0% 68.0%
139963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 72.0 6.35e-01 100.0% 63.0%
5070618 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.87 74.0 6.66e-01 100.0% 70.0%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.87 73.0 7.04e-01 100.0% 85.0%
4175748 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.87 74.0 5.69e-01 100.0% 43.8%
3066183 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.87 71.0 5.06e-01 100.0% 32.4%
4250487 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.86 71.0 7.18e-01 97.1% 94.3%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 71.0 6.20e-01 100.0% 61.8%
3968864 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.86 72.0 5.67e-01 100.0% 45.3%
4986612 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 71.0 6.64e-01 100.0% 75.6%
3590541 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.86 71.0 4.48e-01 100.0% 18.9%
3886097 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.86 72.0 5.70e-01 100.0% 46.7%
3544647 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.85 70.0 5.80e-01 100.0% 52.3%
3693312 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 71.0 6.00e-01 100.0% 56.7%
3603081 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.85 74.0 5.75e-01 100.0% 46.7%
4293871 101.1.1.62 alpha arrays › HTH › HTH › Three-helical HTH › HTH_24 0.84 71.0 6.20e-01 100.0% 63.6%
4014100 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 67.0 5.64e-01 100.0% 53.3%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 69.0 5.46e-01 100.0% 45.3%
3787646 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.83 70.0 6.75e-01 100.0% 90.0%
3973615 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.83 73.0 5.98e-01 100.0% 53.8%
4034200 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.83 67.0 5.61e-01 100.0% 52.3%
3890615 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.83 68.0 6.17e-01 100.0% 68.0%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.83 65.0 5.52e-01 100.0% 52.3%
4115147 101.1.1.96 alpha arrays › HTH › HTH › Three-helical HTH › Neugrin 0.82 68.0 5.15e-01 100.0% 40.0%
3953011 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.82 68.0 6.00e-01 100.0% 63.6%
3984815 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.82 66.0 5.94e-01 100.0% 63.6%
5013438 101.1.2.881 alpha arrays › HTH › HTH › winged helix domain › UPF0175 0.82 68.0 5.76e-01 97.1% 58.3%
5072014 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.82 68.0 5.35e-01 97.1% 46.7%
5020571 101.1.1.101 alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.81 65.0 4.74e-01 100.0% 32.4%
3593198 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.81 67.0 5.98e-01 97.1% 66.0%
5065596 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.81 67.0 5.17e-01 97.1% 43.8%
5074942 101.1.11.0 alpha arrays › HTH › HTH › Ribbon-helix-helix 0.81 65.0 5.15e-01 94.3% 45.3%
3949663 101.1.1.307 alpha arrays › HTH › HTH › Three-helical HTH › DUF3071 0.81 66.0 6.37e-01 97.1% 82.5%
4395941 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 63.0 6.31e-01 100.0% 97.1%
3281819 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.81 64.0 5.09e-01 100.0% 42.5%
3256356 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 64.0 5.48e-01 100.0% 54.7%
4090141 101.1.1.494 alpha arrays › HTH › HTH › Three-helical HTH › HTH_29 0.81 69.0 5.84e-01 100.0% 58.3%
1546121 101.1.1.42 alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r4_2 0.80 64.0 5.19e-01 100.0% 45.3%
3502245 101.1.6.13 alpha arrays › HTH › HTH › TrpR › HTH_28 0.79 63.0 6.00e-01 100.0% 77.8%
5051778 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 66.0 6.65e-01 100.0% 100.0%
4938759 101.1.8.14 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › UPF0175 0.78 64.0 5.66e-01 100.0% 69.1%
4460997 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.77 61.0 5.83e-01 100.0% 77.8%
4996898 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 5.35e-01 100.0% 53.1%
5052142 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 65.0 6.03e-01 100.0% 75.6%
4966252 101.1.1.371 alpha arrays › HTH › HTH › Three-helical HTH › UPF0175 0.77 60.0 6.00e-01 94.3% 97.1%
3904156 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 59.0 5.64e-01 100.0% 75.6%
4977403 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 63.0 5.37e-01 100.0% 56.7%
4963527 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.76 67.0 4.85e-01 100.0% 37.9%
4009872 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.76 63.0 5.44e-01 100.0% 58.3%
5038587 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.76 62.0 5.38e-01 100.0% 71.7%
5019932 3151.1.1.0 alpha arrays › SPP1 phage GP23.1 › SPP1 phage GP23.1 › SPP1 phage GP23.1 0.76 61.0 6.18e-01 100.0% 100.0%
4363711 589.1.2.1 alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › TF C-terminus (Pfam 05698) › Trigger_C 0.75 59.0 3.68e-01 91.4% 18.5%
3273891 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.75 60.0 4.28e-01 100.0% 30.0%
5013314 101.1.4.3 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › HTH_3 0.74 60.0 5.21e-01 100.0% 60.0%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 59.0 5.17e-01 100.0% 58.3%
3998880 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 57.0 4.41e-01 100.0% 36.8%
3793383 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.73 56.0 4.90e-01 100.0% 53.8%
3985435 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 56.0 5.55e-01 100.0% 87.5%
3983783 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.72 55.0 4.30e-01 100.0% 43.2%
3374351 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.71 56.0 5.21e-01 100.0% 72.0%
3926525 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.71 54.0 5.32e-01 97.1% 87.5%
3954536 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 59.0 4.16e-01 100.0% 30.0%
3389609 101.1.1.35 alpha arrays › HTH › HTH › Three-helical HTH › HTH_psq 0.68 53.0 4.50e-01 100.0% 50.0%