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WDY79187.1

Arc-Vir

OP630576__WDY79187.1__ORF-00002__00002

Identity

Accession:
OP630576 ↗
Protein ID:
WDY79187.1 ↗
Kingdom:
archaea

Quality

72.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Halorubrum_tailed_virus

TaxID: 2992037

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 14-179
PDB
Domain cluster: rep: IMGVR_UViG_2554235495_000005-2554235495-2556168291__D10-154
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wngA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 31.0 3.81e-01 90.4% 71.0%
3beuA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.62 31.0 3.98e-01 91.6% 80.8%
2bc4A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 29.0 3.54e-01 89.8% 66.1%
3tvjB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 32.0 3.94e-01 91.6% 78.5%
2x1wL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 30.0 3.71e-01 88.6% 76.2%
2omlA02 3.30.70.1560 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Alpha-L RNA-binding motif 0.57 29.0 3.45e-01 80.7% 70.5%
2y4iB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 25.0 3.26e-01 86.1% 74.7%
4a2aA02 3.30.1490.110 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.54 29.0 3.89e-01 89.2% 98.9%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.53 39.0 4.27e-01 92.8% 92.0%
5xogC01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.51 35.0 3.84e-01 92.8% 84.6%
6gmhC01 3.30.1360.10 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit 0.51 34.0 3.66e-01 92.2% 79.1%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2475124 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.68 38.0 4.96e-01 89.2% 97.9%
3947204 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.63 38.0 4.20e-01 91.0% 74.6%
5035840 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 38.0 4.36e-01 97.6% 87.5%
3386975 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.59 35.0 4.07e-01 88.0% 82.6%
3580020 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.56 48.0 4.56e-01 91.6% 81.0%
4943928 1.1.7.140 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 0.55 36.0 4.03e-01 98.2% 83.8%
3889152 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.54 29.0 3.40e-01 89.2% 73.0%
3992997 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 33.0 3.70e-01 89.2% 79.2%
3486590 872.1.1.0 ↗ a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.52 30.0 3.89e-01 80.1% 100.0%
3941668 1.1.7.87 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 0.51 36.0 4.01e-01 94.6% 91.5%
3196339 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.51 31.0 3.45e-01 97.0% 75.4%
3974075 304.133.1.1 ↗ a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL 0.51 31.0 3.89e-01 80.1% 99.0%
3396189 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 31.0 3.44e-01 89.8% 74.1%