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OP686972.1__WAK44799.1__GEEDAMGG_00034__00034
Bact-VirOP686972.1__WAK44799.1__GEEDAMGG_00034__00034
Identity
- Accession:
- OP686972 ↗
- Kingdom:
- phage
Quality
71.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-85
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.67 | 46.0 | 4.94e-01 | 71.6% | 88.6% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.65 | 44.0 | 4.54e-01 | 71.6% | 100.0% |
| 1gmuA01 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.61 | 41.0 | 4.46e-01 | 95.1% | 83.6% |
| 2rt6A00 | 1.20.1270.340 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 43.0 | 4.04e-01 | 72.8% | 96.9% |
| 3ajfA00 | 1.20.1440.190 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein | 0.61 | 49.0 | 4.78e-01 | 90.1% | 87.0% |
| 4rg8A04 | 1.10.287.1240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 37.0 | 4.10e-01 | 100.0% | 79.0% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.60 | 42.0 | 3.00e-01 | 72.8% | 51.2% |
| 1earA02 | 3.30.70.790 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain | 0.59 | 41.0 | 4.35e-01 | 96.3% | 84.1% |
| 2jmlA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.59 | 44.0 | 4.42e-01 | 79.0% | 79.0% |
| 6qdjA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 40.0 | 4.16e-01 | 72.8% | 98.7% |
| 1xkzC00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.56 | 48.0 | 3.52e-01 | 100.0% | 85.5% |
| 5c9eB01 | 1.20.1280.80 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.55 | 38.0 | 3.75e-01 | 87.7% | 65.5% |
| 2gqfA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 45.0 | 3.23e-01 | 91.4% | 78.3% |
| 2guzB00 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.55 | 39.0 | 4.21e-01 | 86.4% | 93.8% |
| 6ks6Z01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.53 | 46.0 | 3.30e-01 | 100.0% | 56.5% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.53 | 44.0 | 3.37e-01 | 95.1% | 93.4% |
| 2khvA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.52 | 44.0 | 4.40e-01 | 98.8% | 94.1% |
| 2fsjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 35.0 | 3.04e-01 | 71.6% | 91.3% |
| 2cz4A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 42.0 | 4.03e-01 | 96.3% | 88.9% |
| 4mloA01 | 2.60.120.810 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 37.0 | 3.04e-01 | 80.2% | 100.0% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3588263 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.70 | 50.0 | 5.20e-01 | 76.5% | 88.0% |
| 3965196 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 46.0 | 5.20e-01 | 74.1% | 100.0% |
| 5028046 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 43.0 | 5.05e-01 | 71.6% | 100.0% |
| 3515878 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 46.0 | 4.81e-01 | 75.3% | 88.0% |
| 5053673 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 46.0 | 4.98e-01 | 74.1% | 98.5% |
| 5040722 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 42.0 | 4.63e-01 | 96.3% | 88.3% |
| 3278372 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.64 | 43.0 | 4.68e-01 | 98.8% | 86.2% |
| 3708093 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.63 | 47.0 | 4.60e-01 | 84.0% | 73.3% |
| 4015665 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.63 | 48.0 | 5.15e-01 | 93.8% | 98.6% |
| 3180809 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.63 | 43.0 | 4.92e-01 | 97.5% | 96.7% |
| 4928284 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.62 | 40.0 | 3.26e-01 | 100.0% | 33.1% |
| 4951928 | 101.1.9.75 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF61 | 0.62 | 42.0 | 4.58e-01 | 97.5% | 88.9% |
| 5040655 | 2003.1.4.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › DHS-like NAD/FAD-binding domain › SIR2_2 | 0.61 | 53.0 | 3.45e-01 | 100.0% | 51.0% |
| 5007377 | 633.6.1.3 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › HpaB | 0.61 | 50.0 | 3.98e-01 | 92.6% | 93.7% |
| 3701635 | 3696.1.1.0 ↗ | a+b two layers › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related › DNA helicase UvsW N-terminal a+b domain-related | 0.60 | 48.0 | 4.58e-01 | 100.0% | 74.7% |
| 4008376 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.60 | 42.0 | 4.67e-01 | 72.8% | 100.0% |
| 4032511 | 5051.1.1.10 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease_2 | 0.60 | 47.0 | 2.93e-01 | 85.2% | 69.8% |
| 3939429 | 2004.1.1.17 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Myosin_head | 0.60 | 43.0 | 2.56e-01 | 76.5% | 41.1% |
| 1041203 | 3239.1.1.1 ↗ | alpha complex topology › Cas1 › Cas1 › Cas1 › Cas_Cas1 | 0.59 | 43.0 | 2.93e-01 | 76.5% | 73.0% |
| 163446 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.59 | 44.0 | 4.42e-01 | 79.0% | 79.0% |
| 3594308 | 306.3.1.0 ↗ | a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like | 0.59 | 47.0 | 4.12e-01 | 100.0% | 56.2% |
| 4970959 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 40.0 | 4.21e-01 | 76.5% | 81.4% |
| 3289373 | 3601.1.1.0 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain | 0.59 | 41.0 | 3.44e-01 | 74.1% | 41.4% |
| 5057452 | 4271.1.1.0 ↗ | alpha complex topology › PriB N-terminal domain-like › PriB N-terminal domain-like › PriB N-terminal domain-like | 0.58 | 40.0 | 3.09e-01 | 76.5% | 30.5% |
| 4021723 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.57 | 41.0 | 3.92e-01 | 75.3% | 68.4% |
| 5001240 | 2007.1.2.5 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Bmp | 0.56 | 51.0 | 3.47e-01 | 97.5% | 33.3% |
| 4988663 | 101.1.2.30 ↗ | alpha arrays › HTH › HTH › winged helix domain › TrmB | 0.56 | 39.0 | 3.91e-01 | 76.5% | 70.6% |
| 3472663 | 70.3.1.0 ↗ | beta barrels › beta-clip › SET domain-like › SET domain-like | 0.55 | 42.0 | 2.91e-01 | 85.2% | 51.4% |
| 4013386 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.54 | 37.0 | 3.81e-01 | 75.3% | 76.0% |
| 3705847 | 376.1.1.61 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › Rtf2 | 0.53 | 37.0 | 3.95e-01 | 98.8% | 84.3% |
| 4968035 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.53 | 43.0 | 4.09e-01 | 90.1% | 79.6% |
| None | — | 0.53 | 42.0 | 3.03e-01 | 91.4% | 73.0% | |
| 5071804 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.53 | 38.0 | 3.69e-01 | 80.2% | 68.9% |