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OP686972.1__WAK44803.1__GEEDAMGG_00038__00038

Bact-Vir

OP686972.1__WAK44803.1__GEEDAMGG_00038__00038

Identity

Accession:
OP686972 ↗
Kingdom:
phage

Quality

68.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Campylobacter_phage_PC11

TaxID: 2996153

Cluster

View cluster (116 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 20-164
PDB
Domain cluster: rep: SRR1747055_scaffold_2_prodigal-single.1__X__X__00342__D202-325
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF22758.3 best Phage_cement 70.0 3.30e-19 97.2% 83.6%
PF23982.3 XM1_gp53_minor_capsid 48.3 1.40e-12 96.5% 84.4%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6xgqb01 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.68 43.0 5.31e-01 81.4% 100.0%
3gqhA01 2.40.300.10 Mainly Beta › Beta Barrel › Virus Head Decoration Protein; Chain: A, › Head decoration protein D 0.66 54.0 5.82e-01 94.5% 100.0%
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.59 24.0 3.02e-01 93.1% 60.4%
6ethA04 2.40.340.10 Mainly Beta › Beta Barrel › Beta-clip › MoeA, C-terminal, domain IV 0.57 32.0 4.06e-01 78.6% 91.0%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083816 70.4.1.0 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) 0.80 39.0 5.66e-01 95.2% 100.0%
2526359 70.4.1.2 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Phage_head_fibr 0.71 32.0 4.69e-01 93.8% 100.0%
2808420 70.4.1.1 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › HDPD 0.66 45.0 5.06e-01 86.9% 90.8%
364260 70.4.1.3 ↗ beta barrels › beta-clip › Head decoration protein D (gpD, major capsid protein D) › Head decoration protein D (gpD, major capsid protein D) › Peptidase_G2 0.60 54.0 5.16e-01 94.5% 100.0%
5017350 70.1.1.1 ↗ beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C 0.59 30.0 4.13e-01 80.7% 100.0%