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OP686972.1__WAK44812.1__GEEDAMGG_00047__00047

Bact-Vir

OP686972.1__WAK44812.1__GEEDAMGG_00047__00047

Identity

Accession:
OP686972 ↗
Kingdom:
phage

Quality

86.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Campylobacter_phage_PC11

TaxID: 2996153

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-113
PDB
Domain cluster: representative
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bjdA01 1.10.1240.20 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Lytic transglycosylase, superhelical linker domain 0.61 33.0 3.70e-01 81.7% 65.9%
4hteA03 1.10.167.30 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › 0.59 41.0 4.72e-01 85.3% 97.5%
2ii2A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.58 35.0 3.65e-01 100.0% 65.3%
5z62E00 1.25.40.40 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Cytochrome c oxidase, subunit Va/VI 0.57 30.0 3.06e-01 86.2% 50.5%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.57 32.0 3.71e-01 72.5% 78.7%
4w8pA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.56 42.0 3.96e-01 78.0% 86.2%
1xnpA02 6.10.250.680 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.55 26.0 2.88e-01 86.2% 50.5%
1n00A01 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.55 33.0 3.68e-01 100.0% 75.0%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.55 41.0 4.07e-01 78.0% 82.9%
6yz2A01 1.20.120.350 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C 0.55 43.0 4.16e-01 80.7% 87.5%
4adnA01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.55 39.0 4.30e-01 81.7% 94.1%
3nxcA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 41.0 3.48e-01 89.9% 49.7%
1cmjA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.53 48.0 3.25e-01 100.0% 75.4%
4hojA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 37.0 3.85e-01 72.5% 87.4%
3tp3A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.53 41.0 3.79e-01 90.8% 62.8%
2v6eA01 1.10.287.3180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 34.0 3.96e-01 89.0% 94.7%
2bnlC00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.51 37.0 3.49e-01 77.1% 91.0%
1bt3A00 1.10.1280.10 Mainly Alpha › Orthogonal Bundle › di-copper center containing domain from catechol oxidase › Di-copper center containing domain from catechol oxidase 0.50 44.0 3.20e-01 100.0% 79.5%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3946464 3103.1.1.0 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN 0.77 62.0 6.60e-01 84.4% 96.8%
4537543 3103.1.1.4 ↗ alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Phage_TAC_9 0.76 66.0 6.33e-01 93.6% 94.4%
3483552 176.1.1.0 ↗ alpha arrays › Annexin › Annexin › Annexin 0.63 31.0 3.63e-01 84.4% 65.3%
5004013 601.7.1.69 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › AAA_13 0.61 46.0 4.47e-01 81.7% 96.8%
3267808 101.1.2.625 ↗ alpha arrays › HTH › HTH › winged helix domain › BRWD1_N 0.59 40.0 4.46e-01 84.4% 90.6%
3628574 109.4.1.210 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 0.57 37.0 3.07e-01 73.4% 38.4%
3529785 601.1.2.6 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › Talin_IBS2B 0.56 43.0 4.13e-01 79.8% 89.6%
3531698 196.1.1.1 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS 0.55 41.0 3.78e-01 78.0% 64.3%
3621947 196.1.1.1 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS 0.54 40.0 4.13e-01 76.1% 83.0%
3887776 196.1.1.1 ↗ alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS 0.54 40.0 3.59e-01 78.9% 58.1%
3901387 109.4.1.1784 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28344 0.53 37.0 2.35e-01 71.6% 18.6%
3730378 109.4.1.22 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Adaptin_N 0.53 36.0 2.58e-01 71.6% 23.3%
3484662 109.4.1.1413 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF28415 0.50 36.0 2.58e-01 73.4% 27.9%
3790549 109.4.1.95 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.50 33.0 2.62e-01 72.5% 32.9%