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OP712466.1__WBF76849.1__PSV3_00147__00044
Bact-VirOP712466.1__WBF76849.1__PSV3_00147__00044
Identity
- Accession:
- OP712466 ↗
- Kingdom:
- phage
Quality
86.1
mean pLDDT
Taxonomy
TaxID: 3432359
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-59
Domain cluster:
representative
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.85 | 77.0 | 6.10e-01 | 100.0% | 55.8% |
| 4trtA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.84 | 76.0 | 5.88e-01 | 100.0% | 50.8% |
| 2avtB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.83 | 74.0 | 5.23e-01 | 100.0% | 37.8% |
| 4tr6A01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.82 | 74.0 | 5.14e-01 | 100.0% | 40.0% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.81 | 73.0 | 5.65e-01 | 100.0% | 52.0% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.81 | 72.0 | 5.60e-01 | 100.0% | 50.0% |
| 1rwzA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.81 | 72.0 | 4.68e-01 | 100.0% | 31.6% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.80 | 71.0 | 5.58e-01 | 100.0% | 52.5% |
| 3t0pA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.80 | 70.0 | 4.99e-01 | 100.0% | 36.6% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.79 | 70.0 | 5.63e-01 | 100.0% | 55.8% |
| 1b77A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.77 | 67.0 | 4.50e-01 | 100.0% | 29.8% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.75 | 65.0 | 5.21e-01 | 100.0% | 55.5% |
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.75 | 65.0 | 5.09e-01 | 100.0% | 50.8% |
| 2z0lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.70 | 59.0 | 3.80e-01 | 98.3% | 31.2% |
| 1kyfA01 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.67 | 49.0 | 3.78e-01 | 79.3% | 87.3% |
| 2fpnA02 | 3.30.360.40 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › YwmB-like | 0.65 | 44.0 | 4.25e-01 | 70.7% | 81.5% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 54.0 | 4.15e-01 | 96.6% | 83.2% |
| 4b1bA00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 49.0 | 2.95e-01 | 91.4% | 49.9% |
| 3havA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 43.0 | 3.77e-01 | 82.8% | 50.6% |
| 7mhwA01 | 2.40.128.10 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 42.0 | 3.73e-01 | 77.6% | 100.0% |
| 3p8aA02 | 2.60.40.4320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 39.0 | 3.48e-01 | 70.7% | 45.6% |
| 2la7A01 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.58 | 45.0 | 3.63e-01 | 89.7% | 98.4% |
| 2da0A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 48.0 | 3.94e-01 | 94.8% | 71.1% |
| 2d9xA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 48.0 | 3.93e-01 | 93.1% | 80.9% |
| 4mymA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.58 | 40.0 | 3.04e-01 | 74.1% | 33.8% |
| 1egxA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 48.0 | 3.87e-01 | 94.8% | 80.9% |
| 2kr0A01 | 2.30.29.70 | Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 | 0.57 | 47.0 | 3.89e-01 | 94.8% | 82.3% |
| 4gqzA00 | 2.60.40.3700 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 48.0 | 3.55e-01 | 96.6% | 80.1% |
| 4k17B01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 46.0 | 3.77e-01 | 91.4% | 67.6% |
| 1qqgA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 47.0 | 3.93e-01 | 94.8% | 86.4% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 43.0 | 3.69e-01 | 84.5% | 98.9% |
| 5kiqA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 43.0 | 4.06e-01 | 86.2% | 73.6% |
| 4wqkA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.56 | 37.0 | 2.77e-01 | 70.7% | 23.4% |
| 3lzhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 41.0 | 3.54e-01 | 86.2% | 50.5% |
| 1y9kA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 38.0 | 3.14e-01 | 72.4% | 46.0% |
| 5ighA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 44.0 | 3.84e-01 | 86.2% | 58.0% |
| 2yt4A03 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 38.0 | 3.20e-01 | 72.4% | 55.8% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.55 | 37.0 | 3.56e-01 | 75.9% | 61.5% |
| 1ei5A02 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 38.0 | 3.51e-01 | 77.6% | 72.0% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.54 | 39.0 | 3.23e-01 | 74.1% | 44.1% |
| 3ct8A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.54 | 36.0 | 2.93e-01 | 72.4% | 31.6% |
| 7ctpA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 45.0 | 3.62e-01 | 96.6% | 85.8% |
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 37.0 | 3.68e-01 | 79.3% | 71.7% |
| 1r5bA03 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 39.0 | 3.33e-01 | 84.5% | 95.5% |
| 2odhA02 | 3.30.70.3570 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain | 0.52 | 41.0 | 3.42e-01 | 89.7% | 66.4% |
| 1ex4B02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.51 | 35.0 | 3.55e-01 | 82.8% | 71.2% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.51 | 36.0 | 3.89e-01 | 82.8% | 93.6% |
| 4nhxA02 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 34.0 | 2.34e-01 | 70.7% | 81.7% |
| 4fflA02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 41.0 | 2.81e-01 | 100.0% | 59.5% |
| 5kmpB00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.51 | 41.0 | 2.58e-01 | 96.6% | 52.7% |
| 2grgA01 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.51 | 36.0 | 3.29e-01 | 77.6% | 100.0% |
| 2q7eA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.50 | 36.0 | 2.58e-01 | 81.0% | 29.2% |
| 3ewmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.50 | 44.0 | 2.80e-01 | 98.3% | 77.0% |
| 3ftbA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.50 | 38.0 | 3.08e-01 | 81.0% | 61.6% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4047098 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.85 | 77.0 | 5.96e-01 | 100.0% | 55.0% |
| 1549269 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.84 | 76.0 | 5.89e-01 | 100.0% | 51.2% |
| 4480621 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.84 | 75.0 | 5.86e-01 | 100.0% | 51.7% |
| 4234515 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.84 | 75.0 | 5.88e-01 | 100.0% | 53.3% |
| 4251800 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.83 | 74.0 | 5.68e-01 | 100.0% | 48.5% |
| 1871494 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.83 | 75.0 | 5.82e-01 | 100.0% | 52.9% |
| 3387600 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.83 | 75.0 | 5.83e-01 | 100.0% | 53.3% |
| 4939065 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.83 | 74.0 | 5.77e-01 | 100.0% | 64.2% |
| 158230 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.82 | 73.0 | 5.65e-01 | 100.0% | 55.1% |
| 4995742 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.82 | 74.0 | 5.93e-01 | 100.0% | 54.5% |
| 4315973 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.81 | 72.0 | 5.61e-01 | 100.0% | 55.2% |
| 5990 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.81 | 72.0 | 5.62e-01 | 100.0% | 63.1% |
| 5977 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.80 | 71.0 | 5.58e-01 | 100.0% | 52.5% |
| 1387073 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.77 | 69.0 | 5.91e-01 | 100.0% | 92.3% |
| 5980 | 227.1.1.9 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_PPF | 0.77 | 67.0 | 5.49e-01 | 100.0% | 61.8% |
| 4961538 | 2002.1.1.256 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MSH_C | 0.69 | 41.0 | 2.40e-01 | 87.9% | 7.9% |
| 4216985 | 331.19.1.2 ↗ | a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains › RnlA_toxin_N | 0.68 | 47.0 | 4.13e-01 | 72.4% | 57.6% |
| 3938955 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 43.0 | 4.80e-01 | 86.2% | 88.9% |
| 4995145 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.65 | 44.0 | 3.97e-01 | 72.4% | 51.8% |
| 3699699 | 5.1.4.179 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_Vps41 | 0.64 | 55.0 | 3.69e-01 | 96.6% | 36.9% |
| 3841716 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.64 | 46.0 | 3.47e-01 | 79.3% | 52.9% |
| 4946529 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.63 | 47.0 | 3.25e-01 | 81.0% | 30.0% |
| 2323730 | 9.1.1.4 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › META | 0.62 | 48.0 | 3.82e-01 | 86.2% | 100.0% |
| 3775274 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.60 | 49.0 | 2.96e-01 | 89.7% | 21.8% |
| 3582026 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.60 | 49.0 | 4.48e-01 | 93.1% | 97.5% |
| 3882213 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 49.0 | 4.29e-01 | 93.1% | 82.2% |
| 431522 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.59 | 39.0 | 3.45e-01 | 70.7% | 44.1% |
| 3625202 | 719.1.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain | 0.59 | 49.0 | 4.62e-01 | 93.1% | 97.1% |
| 3968382 | 211.1.1.1 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase | 0.58 | 39.0 | 3.04e-01 | 70.7% | 38.6% |
| 3900771 | 330.9.1.0 ↗ | a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p | 0.58 | 39.0 | 3.93e-01 | 75.9% | 68.3% |
| 3590632 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.58 | 39.0 | 4.02e-01 | 70.7% | 83.6% |
| 3576021 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.57 | 47.0 | 3.65e-01 | 91.4% | 60.8% |
| 3209488 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.57 | 50.0 | 4.13e-01 | 98.3% | 81.9% |
| 3730875 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.57 | 50.0 | 4.26e-01 | 98.3% | 87.4% |
| 3474420 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.57 | 48.0 | 3.57e-01 | 94.8% | 56.7% |
| 3996945 | 2007.2.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II | 0.56 | 51.0 | 3.43e-01 | 100.0% | 40.2% |
| 4001872 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.56 | 49.0 | 3.48e-01 | 100.0% | 74.1% |
| 5059800 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.55 | 41.0 | 3.86e-01 | 79.3% | 85.7% |
| 3498699 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.55 | 41.0 | 2.91e-01 | 77.6% | 25.1% |
| 4202176 | 220.1.1.123 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st | 0.55 | 48.0 | 3.37e-01 | 100.0% | 70.5% |
| 3270269 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.54 | 45.0 | 3.30e-01 | 94.8% | 68.5% |
| 3973947 | 3454.1.1.0 ↗ | beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like | 0.54 | 42.0 | 3.97e-01 | 86.2% | 78.6% |
| 5012053 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.53 | 39.0 | 3.72e-01 | 82.8% | 89.2% |
| 3782688 | 59.1.4.1 ↗ | beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N | 0.53 | 43.0 | 3.15e-01 | 93.1% | 84.6% |
| 5067782 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.53 | 34.0 | 3.28e-01 | 72.4% | 55.7% |
| 3581195 | 11.12.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD | 0.51 | 42.0 | 2.93e-01 | 93.1% | 92.9% |
| 4024044 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 34.0 | 2.82e-01 | 70.7% | 76.9% |
| 3933788 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 36.0 | 3.63e-01 | 77.6% | 86.7% |
| 4055950 | 3018.1.1.0 ↗ | a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like | 0.50 | 35.0 | 3.32e-01 | 74.1% | 67.1% |
| 5015183 | 7528.1.1.0 ↗ | a/b three-layered sandwiches › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains › Phosphoglucomutase, first 3 domains | 0.50 | 42.0 | 3.41e-01 | 93.1% | 87.3% |
D2
high
residues 70-167
Domain cluster:
rep: IMGVR_UViG_3300028564_000083-3300028564-Ga0255344_100350621__D115-222
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.88 | 83.0 | 7.46e-01 | 100.0% | 84.4% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.88 | 83.0 | 7.69e-01 | 100.0% | 87.4% |
| 5agvA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.87 | 81.0 | 7.29e-01 | 100.0% | 89.3% |
| 4trtA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.86 | 80.0 | 7.39e-01 | 100.0% | 86.9% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.86 | 80.0 | 7.43e-01 | 100.0% | 89.2% |
| 3pweA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.85 | 79.0 | 7.25e-01 | 100.0% | 87.8% |
| 6ptrB01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.84 | 78.0 | 7.39e-01 | 100.0% | 93.8% |
| 4trtA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.79 | 74.0 | 6.84e-01 | 100.0% | 91.7% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.70 | 63.0 | 4.62e-01 | 100.0% | 46.3% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.66 | 36.0 | 3.34e-01 | 100.0% | 41.7% |
| 3rp7A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.65 | 41.0 | 3.42e-01 | 94.9% | 37.5% |
| 4bjzA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 40.0 | 3.33e-01 | 94.9% | 37.5% |
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.63 | 29.0 | 3.37e-01 | 80.6% | 56.9% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.60 | 28.0 | 3.27e-01 | 100.0% | 60.6% |
| 3i6dA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.58 | 39.0 | 3.37e-01 | 94.9% | 43.3% |
| 4i79A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 41.0 | 2.89e-01 | 79.6% | 34.5% |
| 6g6qA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 41.0 | 3.70e-01 | 82.7% | 84.7% |
| 4l3rA00 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.54 | 41.0 | 3.64e-01 | 81.6% | 68.5% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 39.0 | 2.98e-01 | 81.6% | 67.3% |
| 2cduA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 3.65e-01 | 87.8% | 94.0% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 29.0 | 3.27e-01 | 82.7% | 73.9% |
| 3fvzA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 39.0 | 2.80e-01 | 82.7% | 45.6% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4146527 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.90 | 85.0 | 7.61e-01 | 100.0% | 86.2% |
| 4569733 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.89 | 84.0 | 7.31e-01 | 100.0% | 87.1% |
| 4995743 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.88 | 82.0 | 7.59e-01 | 100.0% | 88.3% |
| 4460376 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.87 | 82.0 | 7.55e-01 | 100.0% | 88.3% |
| 4995742 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.86 | 79.0 | 7.63e-01 | 100.0% | 90.0% |
| 2878151 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.82 | 76.0 | 7.05e-01 | 100.0% | 87.6% |
| 5032493 | 56.2.1.1 ↗ | beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT | 0.75 | 32.0 | 4.03e-01 | 98.0% | 66.1% |
| 2596548 | 56.2.1.1 ↗ | beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT | 0.73 | 33.0 | 3.92e-01 | 99.0% | 61.4% |
| 4982571 | 56.2.1.1 ↗ | beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT | 0.72 | 31.0 | 3.99e-01 | 95.9% | 69.0% |
| 5050433 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 29.0 | 4.00e-01 | 100.0% | 77.8% |
| 4987919 | 56.2.1.1 ↗ | beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT › CooT | 0.70 | 30.0 | 3.82e-01 | 92.9% | 67.2% |
| 3839042 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 29.0 | 3.95e-01 | 100.0% | 86.7% |
| 2323952 | 4.29.1.1 ↗ | beta barrels › SH3 › Pyrrolysyl-tRNA synthetase tRNA binding domain › Pyrrolysyl-tRNA synthetase tRNA binding domain › PF31240 | 0.58 | 31.0 | 3.27e-01 | 86.7% | 57.0% |
| 4835224 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.57 | 41.0 | 2.89e-01 | 74.5% | 38.6% |
| 3790212 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 41.0 | 3.19e-01 | 80.6% | 68.3% |
| 4795169 | 5.1.4.404 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IP5PC_F | 0.54 | 41.0 | 3.61e-01 | 82.7% | 77.2% |
| 4029107 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 39.0 | 2.93e-01 | 78.6% | 69.8% |
| 3248946 | 5.1.4.255 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD | 0.53 | 39.0 | 2.64e-01 | 76.5% | 49.7% |
| 3314585 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.53 | 40.0 | 3.06e-01 | 82.7% | 56.5% |
| 4026678 | 4.1.1.13 ↗ | beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd | 0.51 | 29.0 | 3.34e-01 | 77.6% | 77.1% |
| 3057024 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 38.0 | 2.56e-01 | 78.6% | 45.9% |
| 3924808 | 719.2.1.0 ↗ | beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like | 0.51 | 33.0 | 3.62e-01 | 98.0% | 81.2% |
| 3938509 | 5.1.4.304 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd | 0.50 | 38.0 | 2.74e-01 | 82.7% | 45.8% |
D3
high
residues 182-243