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OP714164.2__UZS00860.1__X__00052
Bact-VirOP714164.2__UZS00860.1__X__00052
Identity
- Accession:
- OP714164 ↗
- Kingdom:
- phage
Quality
88.5
mean pLDDT
Taxonomy
TaxID: 2995601
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-59
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 48.0 | 3.61e-01 | 75.0% | 68.5% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 44.0 | 3.36e-01 | 73.2% | 58.2% |
| 3udcA03 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 49.0 | 4.19e-01 | 80.4% | 100.0% |
| 2aw4Z00 | 4.10.830.30 | Few Secondary Structures › Irregular › 30s Ribosomal Protein S14; Chain N › Ribosomal protein L31 | 0.63 | 46.0 | 4.36e-01 | 80.4% | 88.6% |
| 1qviA01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.62 | 54.0 | 4.32e-01 | 100.0% | 61.7% |
| 1fgsA01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.62 | 46.0 | 2.89e-01 | 78.6% | 18.0% |
| 3m7kA00 | 3.30.40.220 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.61 | 45.0 | 3.37e-01 | 78.6% | 42.3% |
| 1o5zA01 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.59 | 43.0 | 2.77e-01 | 91.1% | 15.5% |
| 4a2bA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 40.0 | 3.42e-01 | 73.2% | 45.3% |
| 3vpbA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 37.0 | 3.53e-01 | 73.2% | 55.1% |
| 2e5vA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.72e-01 | 92.9% | 77.4% |
| 4dziB00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 44.0 | 2.66e-01 | 94.6% | 34.3% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 40.0 | 3.28e-01 | 87.5% | 93.4% |
| 3n5oA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 35.0 | 3.07e-01 | 75.0% | 47.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3249232 | 2004.5.1.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN | 0.74 | 36.0 | 2.48e-01 | 82.1% | 14.7% |
| 3649273 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 46.0 | 2.83e-01 | 75.0% | 18.2% |
| 3489023 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.65 | 50.0 | 3.93e-01 | 83.9% | 40.0% |
| 5071329 | 2.1.1.17 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc | 0.64 | 48.0 | 4.28e-01 | 83.9% | 80.0% |
| 3471911 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.63 | 45.0 | 2.79e-01 | 75.0% | 15.1% |
| 5083173 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.63 | 45.0 | 2.80e-01 | 75.0% | 17.3% |
| 9789 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 46.0 | 2.90e-01 | 78.6% | 17.4% |
| 119462 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.62 | 45.0 | 3.41e-01 | 78.6% | 42.3% |
| 3397473 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.62 | 46.0 | 3.70e-01 | 82.1% | 38.3% |
| 5057148 | 304.111.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurM C-terminal domain-like › PurM C-terminal domain-like | 0.60 | 45.0 | 3.64e-01 | 82.1% | 91.3% |
| 3646867 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 41.0 | 3.01e-01 | 71.4% | 29.7% |
| None | — | 0.60 | 41.0 | 2.57e-01 | 71.4% | 19.6% | |
| 3976549 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.60 | 43.0 | 2.99e-01 | 78.6% | 25.9% |
| 4007998 | 2004.1.1.28 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TK | 0.59 | 43.0 | 2.97e-01 | 78.6% | 25.9% |
| 4675823 | 377.1.1.3 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TK | 0.59 | 42.0 | 4.11e-01 | 78.6% | 81.5% |
| 3599680 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.58 | 50.0 | 3.73e-01 | 94.6% | 43.7% |
| 3697056 | 376.1.3.25 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD-1st_NSD | 0.55 | 46.0 | 4.51e-01 | 94.6% | 98.3% |
| 4927976 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.54 | 41.0 | 3.21e-01 | 83.9% | 55.2% |
| 3703564 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.52 | 46.0 | 3.03e-01 | 96.4% | 38.2% |
| 4579287 | 314.1.1.2 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2b | 0.52 | 44.0 | 2.75e-01 | 98.2% | 20.0% |
| 3924089 | 198.1.1.4 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › DUF3456 | 0.50 | 43.0 | 3.14e-01 | 92.9% | 82.1% |