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OP714164.2__UZS00957.1__X__00149

Bact-Vir

OP714164.2__UZS00957.1__X__00149

Identity

Accession:
OP714164 ↗
Kingdom:
phage

Quality

83.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-78
PDB
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dpbA00 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.55 44.0 3.12e-01 88.2% 69.5%
4qclA02 3.30.70.2820 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 44.0 3.92e-01 88.2% 64.9%
4fvmA02 3.30.70.2820 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 40.0 3.64e-01 88.2% 57.3%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 40.0 3.82e-01 88.2% 69.2%
3h0dA01 3.30.56.130 Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › Transcriptional regulator CtsR, winged HTH domain 0.51 33.0 3.46e-01 88.2% 71.8%
2ek0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.51 36.0 3.49e-01 88.2% 64.4%
5axmB00 3.30.70.3000 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) 0.51 40.0 2.98e-01 93.4% 86.2%
4kt5C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 35.0 3.38e-01 85.5% 62.5%
2ychA02 3.30.1490.300 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.50 36.0 3.94e-01 84.2% 96.7%
ECOD (13)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4929238 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.64 39.0 4.02e-01 92.1% 62.7%
4980688 4955.1.1.0 a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.63 44.0 4.20e-01 89.5% 61.1%
5041306 304.114.1.0 a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain 0.62 39.0 3.88e-01 88.2% 61.3%
4934117 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.57 36.0 3.48e-01 90.8% 56.5%
3607825 2003.1.5.79 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.54 39.0 2.73e-01 77.6% 94.3%
5044501 223.1.1.0 a+b three layers › Profilin-like › sensor domains › sensor domains 0.54 38.0 3.46e-01 76.3% 76.4%
4936984 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 3.46e-01 85.5% 51.7%
3713148 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.51 34.0 3.22e-01 85.5% 55.8%
3995801 2003.1.5.117 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DREV 0.51 40.0 3.21e-01 88.2% 48.5%
327528 328.1.1.2 a+b two layers › IF3-like › AlbA-like › AlbA-like › SpoVS 0.51 36.0 3.49e-01 88.2% 64.4%
3938245 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.51 37.0 2.66e-01 86.8% 27.1%
3997193 5001.1.1.41 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srw 0.51 35.0 2.33e-01 73.7% 82.7%
3692895 375.1.1.179 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.50 36.0 2.59e-01 86.8% 25.2%
D2 medium residues 91-125
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hkaA02 1.10.287.3810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.89 60.0 5.28e-01 71.4% 52.9%
3kkbA00 1.20.120.880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain 0.65 48.0 3.34e-01 77.1% 29.4%
1ja1A03 1.20.990.10 Mainly Alpha › Up-down Bundle › NADPH-cytochrome p450 Reductase; Chain A, domain 3 › NADPH-cytochrome p450 Reductase; Chain A, domain 3 0.64 45.0 3.10e-01 71.4% 19.8%
3rp9A02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.55 44.0 2.79e-01 100.0% 62.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4547686 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.73 50.0 4.04e-01 71.4% 35.7%
3608251 604.17.1.0 alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like 0.67 49.0 4.64e-01 82.9% 66.7%
3709853 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.67 46.0 4.21e-01 74.3% 54.0%