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OP718284.1__WAW11506.1__vBAcePPAc_0129__00128

Bact-Vir

OP718284.1__WAW11506.1__vBAcePPAc_0129__00128

Identity

Accession:
OP718284 ↗
Kingdom:
phage

Quality

88.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-63
PDB
Domain cluster: representative
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4g5aA00 2.60.40.3080 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 57.0 4.66e-01 100.0% 50.5%
7sqxA02 3.30.70.2150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 54.0 4.56e-01 94.3% 84.7%
2mf9A00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.67 56.0 4.08e-01 96.2% 49.0%
3nqhA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.66 54.0 3.94e-01 96.2% 34.6%
2x5pA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 54.0 4.31e-01 100.0% 46.2%
2xqyA03 2.60.40.3190 Mainly Beta › Sandwich › Immunoglobulin-like › Herpesvirus glycoprotein H, C-terminal domain 0.65 58.0 4.31e-01 100.0% 40.6%
3jxvA02 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.65 56.0 4.27e-01 96.2% 68.6%
3ifrA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.65 54.0 3.59e-01 100.0% 38.7%
4es8B02 2.60.40.3580 Mainly Beta › Sandwich › Immunoglobulin-like › 0.64 56.0 4.57e-01 100.0% 58.4%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.63 53.0 4.26e-01 100.0% 79.5%
3jqwC00 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.63 46.0 3.54e-01 96.2% 33.9%
8bk6A01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.63 54.0 4.25e-01 96.2% 70.9%
3ll3B01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.63 52.0 3.46e-01 100.0% 51.0%
4dt4A01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.62 53.0 4.63e-01 94.3% 88.6%
3afgA03 2.60.120.380 Mainly Beta › Sandwich › Jelly Rolls › 0.62 45.0 3.70e-01 96.2% 41.2%
1hx6B01 2.70.9.30 Mainly Beta › Distorted Sandwich › Adenovirus Type 2 Hexon; domain 4 › Viral coat protein p3 0.62 53.0 3.47e-01 96.2% 42.9%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 55.0 4.22e-01 100.0% 57.1%
3jxvA01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 51.0 4.06e-01 96.2% 68.1%
5icuA00 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 54.0 4.38e-01 100.0% 54.9%
1ok0A00 2.60.40.20 Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-amylase inhibitor 0.61 44.0 4.06e-01 96.2% 58.1%
4b6wA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.60 50.0 4.43e-01 100.0% 88.4%
2uytA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.60 48.0 3.31e-01 100.0% 39.6%
6u7jA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 51.0 4.30e-01 100.0% 57.3%
2o3iA01 3.40.1610.10 Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain 0.60 51.0 3.36e-01 98.1% 23.3%
7rskA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 4.18e-01 100.0% 61.5%
4jklA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 53.0 4.39e-01 100.0% 56.8%
5ck3C00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.60 40.0 3.29e-01 71.7% 70.5%
2kfwA01 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.59 49.0 3.90e-01 94.3% 65.5%
6u7iB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 51.0 4.31e-01 100.0% 57.6%
2vzsA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 52.0 4.00e-01 100.0% 51.2%
2j3tC00 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.59 40.0 2.97e-01 71.7% 77.3%
3hn3A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 51.0 4.15e-01 100.0% 61.5%
3bh1A03 3.40.140.40 Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain 0.59 49.0 3.70e-01 100.0% 84.9%
4bf8A00 3.10.50.40 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 49.0 3.84e-01 96.2% 66.7%
6bjqA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 51.0 4.31e-01 100.0% 61.4%
2xwxA03 2.60.40.2550 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 50.0 4.14e-01 100.0% 59.2%
2j3tD01 3.30.450.70 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.57 38.0 2.97e-01 71.7% 73.1%
7pjjA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 50.0 3.78e-01 100.0% 82.2%
4cj0A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 4.08e-01 100.0% 55.8%
3rbgD00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 50.0 4.07e-01 100.0% 60.2%
3bgaA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 49.0 3.99e-01 100.0% 65.7%
2fh5A01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.57 39.0 3.11e-01 77.4% 32.0%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 44.0 3.84e-01 98.1% 81.8%
7ct3A01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.56 38.0 3.01e-01 71.7% 88.9%
6mw4A01 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.56 47.0 3.60e-01 96.2% 53.8%
2pjhA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.56 47.0 4.26e-01 100.0% 93.4%
3of6E00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 49.0 3.94e-01 100.0% 58.7%
4jgpA01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.56 42.0 3.64e-01 86.8% 95.7%
1unnC00 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.55 45.0 3.67e-01 96.2% 45.9%
1z9mA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 48.0 3.91e-01 100.0% 59.6%
1nrjA00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 39.0 2.92e-01 77.4% 76.2%
4uzgA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 47.0 3.41e-01 100.0% 72.4%
3gtyX02 3.10.50.30 Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain 0.54 47.0 4.04e-01 96.2% 71.4%
2mm0A00 2.10.70.110 Mainly Beta › Ribbon › Complement Module; domain 1 › 0.54 45.0 4.24e-01 96.2% 95.3%
2hf6A00 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 38.0 2.81e-01 77.4% 65.8%
3hunA01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 43.0 2.81e-01 100.0% 68.6%
2xa7M01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.53 38.0 3.03e-01 79.2% 80.0%
4p6zM01 3.30.450.60 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 35.0 2.81e-01 77.4% 30.6%
4tweA02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.52 44.0 2.94e-01 98.1% 97.8%
2a2lC00 3.30.450.150 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain 0.52 36.0 2.78e-01 77.4% 56.6%
1xc3A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 43.0 3.57e-01 100.0% 91.3%
3fn2A00 3.30.2200.10 Alpha Beta › 2-Layer Sandwich › histidine kinase doma clostridium symbiosum atcc 14940 › histidine kinase doma clostridium symbiosum atcc 14940 0.51 39.0 3.15e-01 96.2% 44.3%
3fedA02 3.50.30.30 Alpha Beta › 3-Layer(bba) Sandwich › Glucose Oxidase; domain 1 › 0.51 43.0 2.92e-01 98.1% 97.7%
1p0zA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 37.0 2.98e-01 86.8% 84.0%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018703 815.1.1.0 a+b two layers › Chromosomal protein MC1 › Chromosomal protein MC1 › Chromosomal protein MC1 0.63 53.0 4.57e-01 100.0% 63.3%
3998387 221.1.1.52 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.63 45.0 3.96e-01 98.1% 51.2%
3488420 221.1.1.52 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.62 53.0 4.47e-01 100.0% 78.9%
5049461 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.62 42.0 3.24e-01 71.7% 76.8%
4946231 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 41.0 3.17e-01 71.7% 73.1%
5045235 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.61 41.0 3.18e-01 71.7% 75.4%
4928213 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.61 49.0 4.59e-01 96.2% 91.4%
3783191 223.2.1.9 a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.60 41.0 2.80e-01 71.7% 22.9%
4028834 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.60 41.0 3.18e-01 71.7% 78.3%
4946284 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 41.0 3.19e-01 73.6% 76.0%
4944469 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 40.0 3.05e-01 77.4% 28.5%
5076486 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 41.0 2.83e-01 71.7% 54.0%
4236893 2487.1.1.7 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.59 47.0 3.23e-01 96.2% 98.7%
5076535 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 40.0 3.07e-01 71.7% 73.8%
4998687 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 41.0 3.16e-01 77.4% 30.8%
4996383 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 40.0 3.04e-01 71.7% 74.1%
5077835 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 39.0 3.06e-01 71.7% 28.8%
5065450 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 42.0 3.05e-01 77.4% 76.8%
3343488 223.2.1.8 a+b three layers › Profilin-like › profilin-like › profilin-like › Sybindin 0.59 40.0 2.95e-01 71.7% 79.3%
3919775 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 51.0 4.17e-01 100.0% 58.0%
4948345 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 39.0 3.09e-01 71.7% 76.8%
3601721 223.2.1.9 a+b three layers › Profilin-like › profilin-like › profilin-like › Sedlin_N 0.58 38.0 2.93e-01 71.7% 25.7%
3607162 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 38.0 2.88e-01 71.7% 23.5%
4337308 10.37.1.0 beta sandwiches › jelly-roll › TerD › TerD 0.58 51.0 3.60e-01 100.0% 72.2%
3787873 2487.1.1.7 a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.58 45.0 3.17e-01 94.3% 97.6%
5047050 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 39.0 3.17e-01 71.7% 85.5%
4945493 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 40.0 3.16e-01 77.4% 76.8%
3732951 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.57 39.0 2.81e-01 71.7% 74.4%
5003862 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 38.0 2.90e-01 71.7% 70.7%
4991121 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.57 38.0 3.05e-01 71.7% 32.2%
3773836 11.1.1.100 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set,C2-set_2 0.57 50.0 3.71e-01 100.0% 44.3%
3223489 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.57 40.0 3.09e-01 77.4% 75.4%
3749319 10.21.1.1 beta sandwiches › jelly-roll › Jelly-roll domain in ADAMTS13 › Jelly-roll domain in ADAMTS13 › ADAMTS_spacer1 0.56 48.0 3.56e-01 96.2% 43.6%
4944923 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 36.0 2.83e-01 77.4% 26.9%
3299342 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 36.0 2.69e-01 73.6% 23.3%
4955758 2004.1.1.16 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Arf 0.56 41.0 2.67e-01 83.0% 48.5%
4541933 223.1.1.43 a+b three layers › Profilin-like › sensor domains › sensor domains › CusS 0.56 42.0 3.08e-01 84.9% 69.4%
4139591 223.2.1.32 a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_2 0.56 40.0 2.87e-01 77.4% 76.9%
5072327 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 40.0 3.03e-01 77.4% 77.0%
4947696 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 39.0 3.06e-01 77.4% 79.2%
3167305 223.2.1.13 a+b three layers › Profilin-like › profilin-like › profilin-like › SRX 0.56 39.0 2.86e-01 77.4% 73.9%
3184475 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 39.0 2.93e-01 75.5% 40.7%
3886048 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.55 38.0 2.80e-01 73.6% 64.3%
4979011 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 37.0 2.82e-01 71.7% 66.2%
3267300 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.55 39.0 3.02e-01 77.4% 76.9%
3482975 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.55 38.0 2.97e-01 73.6% 78.4%
3234374 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.55 48.0 3.83e-01 100.0% 60.9%
3810236 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 38.0 2.77e-01 73.6% 58.2%
4943309 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.55 37.0 3.02e-01 77.4% 33.3%
3191396 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.55 39.0 2.94e-01 77.4% 81.4%
3715033 223.2.1.7 a+b three layers › Profilin-like › profilin-like › profilin-like › SRP-alpha_N 0.54 36.0 2.92e-01 71.7% 79.2%
3927766 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.54 36.0 2.74e-01 77.4% 25.5%
3224132 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.54 47.0 3.92e-01 96.2% 60.0%
3593295 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 38.0 3.09e-01 77.4% 89.1%
3206651 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.54 36.0 2.70e-01 77.4% 25.0%
4976020 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.54 37.0 2.88e-01 77.4% 30.7%
4945021 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 43.0 3.53e-01 96.2% 69.1%
3782075 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.53 38.0 2.85e-01 79.2% 69.7%
3299766 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 38.0 2.78e-01 79.2% 77.0%
4944328 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 37.0 2.91e-01 77.4% 41.5%
3657096 223.2.1.3 a+b three layers › Profilin-like › profilin-like › profilin-like › Clat_adaptor_s 0.51 36.0 2.64e-01 77.4% 70.9%
5068380 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.51 33.0 2.67e-01 77.4% 27.7%