←Back to structures

OP744025.1__UZZ64332.1__A54_92__00152

Bact-Vir

OP744025.1__UZZ64332.1__A54_92__00152

Identity

Accession:
OP744025 ↗
Kingdom:
phage

Quality

71.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Septuagintavirus› Septuagintavirus_sv54

TaxID: 3432369

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-91
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4qdgA02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 44.0 3.75e-01 72.3% 77.8%
5e3iA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.61 34.0 3.21e-01 78.3% 43.4%
3payB02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 40.0 3.50e-01 71.1% 74.2%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 47.0 4.62e-01 91.6% 90.2%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.57 43.0 3.12e-01 80.7% 82.2%
1j6oA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.57 45.0 3.15e-01 95.2% 27.3%
3obwA02 3.30.420.60 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 0.56 44.0 3.94e-01 85.5% 61.0%
2wfbA00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.56 43.0 3.82e-01 83.1% 80.0%
6l25A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.56 45.0 3.15e-01 95.2% 28.2%
1p90A00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.56 43.0 3.87e-01 85.5% 76.4%
4gm2A00 3.90.226.10 Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 0.55 47.0 3.66e-01 95.2% 55.2%
2nn4A00 1.10.287.760 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like 0.54 39.0 4.36e-01 80.7% 100.0%
1aqcB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 47.0 4.21e-01 98.8% 86.9%
5c2vB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 41.0 2.76e-01 83.1% 90.9%
1qxmA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 41.0 3.43e-01 81.9% 91.0%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 38.0 2.62e-01 86.7% 19.3%
5m43A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 44.0 3.64e-01 96.4% 93.5%
1gu2A00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.53 39.0 3.53e-01 80.7% 72.6%
4psrA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 47.0 3.06e-01 100.0% 31.1%
6s6hA01 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.53 35.0 3.30e-01 97.6% 53.2%
1h65B00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 46.0 3.31e-01 100.0% 72.7%
3sqiA02 1.10.443.20 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Centromere DNA-binding protein complex CBF3 subunit, domain 2 0.52 45.0 3.17e-01 100.0% 68.8%
3lppA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.52 36.0 2.61e-01 71.1% 72.2%
4j0wA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 40.0 2.80e-01 88.0% 88.4%
5kzwA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.51 35.0 2.62e-01 71.1% 70.7%
1xwyA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.51 45.0 3.16e-01 97.6% 31.9%
3kt7A01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.51 44.0 3.23e-01 100.0% 86.2%
1ilyA00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.50 38.0 3.79e-01 84.3% 83.3%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 31.0 3.35e-01 83.1% 75.8%
3fvzA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 38.0 2.64e-01 83.1% 85.1%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3484229 4050.1.1.0 ↗ few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz 0.82 31.0 3.98e-01 85.5% 58.0%
3699829 4050.1.1.0 ↗ few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz 0.72 30.0 3.72e-01 85.5% 60.0%
3189994 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.63 36.0 3.53e-01 74.7% 51.1%
3356611 64.1.1.0 ↗ beta meanders › WW domain-like › WW domain › WW domain 0.62 38.0 4.47e-01 95.2% 92.7%
4960549 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 36.0 4.38e-01 81.9% 98.0%
4640808 136.1.1.1 ↗ alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase 0.59 44.0 2.59e-01 79.5% 40.9%
3706282 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.59 32.0 2.88e-01 75.9% 35.8%
4996608 2007.9.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR_2 0.59 47.0 3.49e-01 85.5% 88.0%
3465063 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.58 51.0 3.88e-01 98.8% 60.5%
3391605 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.57 41.0 4.48e-01 85.5% 98.5%
4029614 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 38.0 2.41e-01 91.6% 13.1%
4998500 331.1.1.1 ↗ a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › TBP 0.56 41.0 3.84e-01 77.1% 88.6%
140445 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 44.0 3.91e-01 85.5% 59.5%
139373 2484.4.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.56 43.0 3.82e-01 83.1% 80.0%
5063197 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.55 42.0 3.85e-01 83.1% 65.5%
3920678 5.1.5.41 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40_2 0.54 39.0 2.67e-01 79.5% 89.0%
4948768 708.1.2.2 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › SelR 0.54 35.0 3.54e-01 71.1% 65.9%
3947081 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.53 37.0 4.06e-01 80.7% 92.2%
None — 0.53 47.0 3.22e-01 100.0% 52.8%
3341 107.1.1.5 ↗ alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › DUF1924 0.53 39.0 3.53e-01 80.7% 72.6%
5079980 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.53 42.0 3.25e-01 85.5% 50.5%
3662418 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.53 37.0 3.06e-01 91.6% 37.6%
4025894 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.52 37.0 3.43e-01 74.7% 63.3%
5017944 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 40.0 2.76e-01 84.3% 79.0%
4989647 375.1.1.19 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.52 29.0 3.35e-01 83.1% 80.0%
3612943 632.2.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains 0.51 34.0 2.95e-01 72.3% 41.5%
3452543 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 39.0 2.54e-01 79.5% 30.4%
5051008 873.1.1.0 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.51 44.0 3.56e-01 100.0% 82.9%
3506230 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.51 38.0 2.93e-01 100.0% 32.4%
4049822 5.1.4.62 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.51 39.0 2.56e-01 85.5% 93.6%
4948153 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 30.0 3.18e-01 71.1% 67.1%
4337170 136.1.1.1 ↗ alpha complex topology › Heme-dependent peroxidases › Heme-dependent peroxidases › Heme-dependent peroxidases › peroxidase 0.51 44.0 2.59e-01 100.0% 30.4%