←Back to structures
OP751148.1__WAB08821.1__SEA_SUCCESS_34__00034
Bact-VirOP751148.1__WAB08821.1__SEA_SUCCESS_34__00034
Identity
- Accession:
- OP751148 ↗
- Kingdom:
- phage
Quality
87.3
mean pLDDT
Taxonomy
TaxID: 2999013
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-113
Domain cluster:
rep: MH155870.1__AWN05264.1__SEA_IBANTIK_40__00040__D37-125
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b78A02 | 3.30.750.80 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › RNA methyltransferase domain (HRMD) like | 0.74 | 41.0 | 4.15e-01 | 76.0% | 53.9% |
| 2zyzC00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.72 | 44.0 | 4.55e-01 | 80.0% | 63.5% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.72 | 45.0 | 4.70e-01 | 79.0% | 68.1% |
| 3h4qA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.69 | 50.0 | 4.41e-01 | 76.0% | 62.8% |
| 2eo0B00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.67 | 46.0 | 4.28e-01 | 91.0% | 56.5% |
| 4bmhA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 47.0 | 3.72e-01 | 79.0% | 66.3% |
| 2z0rA00 | 3.40.1350.90 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › Uncharacterised protein PF11572, DUF3234 | 0.62 | 49.0 | 5.00e-01 | 83.0% | 94.8% |
| 1wteA02 | 3.40.1560.10 | Alpha Beta › 3-Layer(aba) Sandwich › type ii restriction endonuclease, domain 2 › type ii restriction endonuclease, domain 2 | 0.60 | 44.0 | 4.15e-01 | 90.0% | 62.9% |
| 3kh5A02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.59 | 39.0 | 3.52e-01 | 78.0% | 48.5% |
| 4rs2A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 43.0 | 3.52e-01 | 77.0% | 51.7% |
| 2og4A01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 46.0 | 3.44e-01 | 85.0% | 53.9% |
| 1a79A01 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.57 | 44.0 | 4.42e-01 | 81.0% | 91.0% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 40.0 | 2.90e-01 | 73.0% | 66.2% |
| 1vhsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 42.0 | 3.53e-01 | 77.0% | 60.6% |
| 3dr6B00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 42.0 | 3.50e-01 | 77.0% | 59.2% |
| 2gk4A00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.56 | 40.0 | 3.11e-01 | 75.0% | 89.5% |
| 5ha4A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 37.0 | 3.36e-01 | 80.0% | 49.3% |
| 2ex2A02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.55 | 39.0 | 3.91e-01 | 81.0% | 70.9% |
| 3bt7A02 | 2.40.50.1070 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 37.0 | 3.27e-01 | 74.0% | 46.9% |
| 6upsA01 | 3.40.395.10 | Alpha Beta › 3-Layer(aba) Sandwich › Adenoviral Proteinase; Chain › Adenoviral Proteinase; Chain A | 0.54 | 41.0 | 3.59e-01 | 81.0% | 61.3% |
| 2znrA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.54 | 44.0 | 3.65e-01 | 88.0% | 68.0% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.54 | 37.0 | 3.97e-01 | 70.0% | 98.8% |
| 1lrzA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 39.0 | 3.52e-01 | 77.0% | 55.9% |
| 2w00A01 | 3.90.1570.50 | Alpha Beta › Alpha-Beta Complex › tt1808, chain A › | 0.54 | 36.0 | 3.07e-01 | 84.0% | 40.4% |
| 3frmA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 39.0 | 2.92e-01 | 76.0% | 91.7% |
| 3i8nB00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.54 | 39.0 | 3.63e-01 | 76.0% | 84.1% |
| 5vxsA01 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.53 | 37.0 | 2.73e-01 | 71.0% | 81.4% |
| 3a3dA02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.53 | 38.0 | 3.79e-01 | 81.0% | 72.5% |
| 3ddjA02 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.53 | 46.0 | 4.14e-01 | 98.0% | 97.2% |
| 2w8mA00 | 3.40.1350.50 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › D212 PD-(D/E)XK nuclease, catalytic motif | 0.53 | 42.0 | 3.65e-01 | 88.0% | 77.0% |
| 5axgA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.53 | 38.0 | 2.63e-01 | 75.0% | 57.1% |
| 2ostD00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 42.0 | 3.85e-01 | 86.0% | 70.7% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.52 | 30.0 | 3.08e-01 | 73.0% | 55.6% |
| 3lv9A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.52 | 44.0 | 4.04e-01 | 91.0% | 95.4% |
| 1hf2A01 | 3.30.750.50 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › Cell-division inhibitor MinC, N-terminal domain | 0.52 | 37.0 | 3.91e-01 | 75.0% | 100.0% |
| 1wduB00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.52 | 38.0 | 2.93e-01 | 75.0% | 60.7% |
| 2inbA00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.51 | 40.0 | 3.68e-01 | 82.0% | 84.4% |
| 2ef7A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 40.0 | 3.74e-01 | 84.0% | 87.3% |
| 1w5dA02 | 3.50.80.20 | Alpha Beta › 3-Layer(bba) Sandwich › D-tyrosyl-trna(Tyr) Deacylase; Chain: A; › D-Ala-D-Ala carboxypeptidase C, peptidase S13 | 0.51 | 36.0 | 3.64e-01 | 82.0% | 73.5% |
| 3hf7A00 | 3.10.580.10 | Alpha Beta › Roll › CBS-domain › CBS-domain | 0.51 | 41.0 | 3.84e-01 | 88.0% | 98.4% |
| 1sgjA00 | 3.20.20.60 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Phosphoenolpyruvate-binding domains | 0.50 | 36.0 | 2.83e-01 | 76.0% | 89.6% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1171244 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.72 | 44.0 | 4.55e-01 | 80.0% | 63.5% |
| 141372 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.72 | 45.0 | 4.70e-01 | 79.0% | 68.1% |
| 5042295 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.71 | 45.0 | 4.71e-01 | 80.0% | 71.1% |
| 5072012 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.69 | 42.0 | 4.40e-01 | 77.0% | 66.7% |
| 3310614 | 2008.1.1.146 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › EDRF1_N | 0.65 | 52.0 | 3.57e-01 | 85.0% | 74.0% |
| 3883797 | 2008.1.1.146 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › EDRF1_N | 0.65 | 50.0 | 3.48e-01 | 82.0% | 80.9% |
| 3390489 | 2008.1.1.146 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › EDRF1_N | 0.65 | 50.0 | 3.37e-01 | 82.0% | 80.5% |
| 3365829 | 2003.1.5.82 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 | 0.63 | 42.0 | 2.92e-01 | 78.0% | 21.6% |
| 5049071 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.62 | 46.0 | 3.95e-01 | 79.0% | 69.4% |
| 3499164 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.61 | 49.0 | 3.45e-01 | 87.0% | 36.8% |
| 4011958 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 44.0 | 3.03e-01 | 76.0% | 67.2% |
| 5026220 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.60 | 50.0 | 4.19e-01 | 91.0% | 77.7% |
| 4026343 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.58 | 41.0 | 4.22e-01 | 72.0% | 98.9% |
| 4221257 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.57 | 46.0 | 3.78e-01 | 87.0% | 72.4% |
| 4947545 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.57 | 46.0 | 3.81e-01 | 99.0% | 46.8% |
| 3415655 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.57 | 51.0 | 3.57e-01 | 99.0% | 62.2% |
| 5068304 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.57 | 43.0 | 3.82e-01 | 82.0% | 74.0% |
| 5023070 | 2008.1.1.141 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_19 | 0.56 | 44.0 | 3.99e-01 | 83.0% | 78.5% |
| 3291916 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.56 | 50.0 | 3.53e-01 | 98.0% | 64.1% |
| 4947849 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.56 | 42.0 | 4.32e-01 | 79.0% | 95.8% |
| 4196773 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.55 | 49.0 | 3.61e-01 | 98.0% | 74.0% |
| 4058117 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.55 | 38.0 | 3.43e-01 | 81.0% | 50.7% |
| 3689992 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 49.0 | 3.55e-01 | 100.0% | 81.0% |
| 3784751 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.54 | 44.0 | 3.58e-01 | 88.0% | 70.3% |
| 5082574 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.54 | 42.0 | 3.70e-01 | 100.0% | 53.8% |
| 3210459 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 38.0 | 3.16e-01 | 72.0% | 67.2% |
| 3666060 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.54 | 48.0 | 3.46e-01 | 100.0% | 82.4% |
| 3244343 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.53 | 45.0 | 3.84e-01 | 91.0% | 70.0% |
| 5011625 | 2008.1.1.57 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › VirArc_Nuclease | 0.53 | 46.0 | 3.78e-01 | 100.0% | 58.5% |
| 3929905 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.53 | 37.0 | 3.47e-01 | 72.0% | 85.8% |
| 4486867 | 3351.1.1.0 ↗ | a/b three-layered sandwiches › Atg7 N-terminal domain-like › N-terminal domain in E1 enzyme Atg7 › N-terminal domain in E1 enzyme Atg7 | 0.52 | 38.0 | 3.82e-01 | 79.0% | 77.0% |
| 5063524 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.52 | 47.0 | 3.96e-01 | 100.0% | 64.6% |
| 3715900 | 3979.1.1.0 ↗ | a+b four layers › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain › Mre11 nuclease C-terminal domain | 0.52 | 37.0 | 3.43e-01 | 74.0% | 79.2% |
| 4654790 | 281.1.1.1 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › Aldolase_II | 0.52 | 46.0 | 3.65e-01 | 99.0% | 90.6% |
| 4933945 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.51 | 44.0 | 3.55e-01 | 100.0% | 57.7% |
| 11040 | 2008.1.1.32 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › XisH | 0.51 | 39.0 | 3.61e-01 | 82.0% | 86.8% |
| 3793768 | 328.1.1.3 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Rpp20 | 0.50 | 36.0 | 3.42e-01 | 75.0% | 83.3% |
| 4995513 | 282.1.1.1 ↗ | a+b duplicates or obligate multimers › CBS-domain › CBS-domain › CBS-domain › CBS | 0.50 | 43.0 | 3.73e-01 | 94.0% | 92.9% |