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OP751148.1__WAB08864.1__SEA_SUCCESS_85__00077

Bact-Vir

OP751148.1__WAB08864.1__SEA_SUCCESS_85__00077

Identity

Accession:
OP751148 ↗
Kingdom:
phage

Quality

76.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Successvirus› Streptomyces_phage_Success

TaxID: 2999013

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-102
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.76 52.0 5.81e-01 71.9% 100.0%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.72 52.0 5.72e-01 92.2% 94.2%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 56.0 5.46e-01 90.6% 76.8%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.70 49.0 5.43e-01 89.1% 100.0%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 5.37e-01 84.4% 100.0%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 52.0 5.30e-01 98.4% 85.9%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 5.04e-01 79.7% 100.0%
2eayB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 46.0 5.02e-01 90.6% 100.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 51.0 5.13e-01 90.6% 89.4%
1f39A00 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.63 50.0 4.37e-01 100.0% 56.4%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 43.0 3.86e-01 73.4% 82.6%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 50.0 4.93e-01 90.6% 95.6%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.93e-01 90.6% 93.9%
2rdeA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.60 45.0 3.72e-01 79.7% 93.7%
1zq1A01 2.30.30.520 Mainly Beta › Roll › SH3 type barrels. › 0.60 50.0 4.74e-01 92.2% 77.9%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 45.0 3.80e-01 81.2% 70.6%
2d7eA01 3.40.1440.60 Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain 0.60 40.0 3.60e-01 92.2% 50.0%
1ljoA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.62e-01 95.3% 96.0%
2coaA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 43.0 3.61e-01 81.2% 83.9%
3tk9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.58 37.0 3.16e-01 75.0% 39.3%
1mi1A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 43.0 3.69e-01 81.2% 89.5%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 42.0 3.86e-01 79.7% 83.9%
4mi7A00 3.90.70.170 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.56 46.0 3.89e-01 98.4% 80.6%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 44.0 3.47e-01 90.6% 44.1%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.54 45.0 3.47e-01 100.0% 92.8%
3ihpA03 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 46.0 2.96e-01 100.0% 69.9%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 42.0 3.52e-01 87.5% 83.6%
2elbA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 44.0 3.86e-01 96.9% 88.2%
3db0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 43.0 3.54e-01 95.3% 48.4%
4n0rA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 40.0 3.72e-01 87.5% 64.7%
4mxtA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 42.0 3.08e-01 90.6% 79.1%
2kigA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.52 40.0 3.09e-01 87.5% 45.3%
3v76A02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 38.0 3.48e-01 85.9% 57.8%
1yoaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 37.0 2.79e-01 75.0% 73.6%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 43.0 3.08e-01 95.3% 35.5%
5cvmA00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 41.0 2.78e-01 96.9% 52.3%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.34e-01 90.6% 50.0%
2kcuA00 3.20.80.10 Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain 0.51 36.0 2.71e-01 75.0% 51.8%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 36.0 3.25e-01 75.0% 81.7%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 40.0 3.48e-01 96.9% 64.9%
8dqwG01 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.50 40.0 3.11e-01 96.9% 85.7%
2hq9B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.50 41.0 3.35e-01 96.9% 46.7%
ECOD (39)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3710624 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 51.0 3.77e-01 78.1% 71.5%
3577864 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.68 50.0 4.55e-01 92.2% 58.8%
3251857 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.65 46.0 3.64e-01 75.0% 73.3%
5029405 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.64 49.0 5.24e-01 92.2% 98.2%
4139090 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.64 48.0 5.06e-01 92.2% 94.5%
3214168 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 47.0 3.83e-01 81.2% 68.0%
5029031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.63 51.0 5.30e-01 98.4% 96.7%
3244907 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 48.0 4.36e-01 85.9% 81.1%
4932434 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.62 46.0 4.52e-01 81.2% 74.3%
4071824 4.17.1.1 ↗ beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.61 51.0 4.85e-01 92.2% 80.0%
3164898 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.61 48.0 4.30e-01 100.0% 60.0%
3476139 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 45.0 3.77e-01 81.2% 63.5%
3989307 220.1.1.88 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF956 0.61 45.0 3.82e-01 81.2% 69.1%
3781329 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 43.0 4.02e-01 75.0% 66.3%
3919606 220.1.1.30 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.60 42.0 3.01e-01 75.0% 63.3%
3270836 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.60 44.0 3.71e-01 81.2% 67.0%
3618718 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 44.0 3.70e-01 81.2% 76.5%
3927945 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 44.0 3.67e-01 81.2% 65.2%
3200064 219.1.1.93 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › DUF6540 0.58 43.0 3.50e-01 79.7% 47.2%
3596312 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.58 48.0 3.86e-01 93.8% 87.7%
26896 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.57 49.0 4.54e-01 100.0% 80.2%
3913573 220.1.1.30 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH 0.57 42.0 3.48e-01 81.2% 76.7%
3482663 4184.1.1.0 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.56 49.0 4.82e-01 100.0% 94.3%
3236058 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.56 48.0 4.44e-01 100.0% 80.0%
3247178 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.56 48.0 4.53e-01 100.0% 85.0%
3472295 4184.1.1.1 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.56 49.0 4.58e-01 100.0% 81.2%
5011877 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.55 38.0 3.41e-01 71.9% 91.1%
3418449 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.54 47.0 2.86e-01 100.0% 49.0%
3405941 4184.1.1.1 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.54 47.0 4.64e-01 100.0% 98.5%
4940665 9.16.1.0 ↗ beta barrels › Lipocalins/Streptavidin › Hypothetical protein Atu4866 › Hypothetical protein Atu4866 0.53 42.0 3.88e-01 85.9% 98.8%
3622643 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.53 45.0 4.22e-01 100.0% 83.5%
3230771 4184.1.1.2 ↗ beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.53 45.0 4.14e-01 100.0% 78.9%
3861490 220.1.1.118 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH 0.52 38.0 3.38e-01 79.7% 84.0%
3596476 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.52 44.0 3.49e-01 98.4% 82.5%
3520852 3794.1.1.0 ↗ a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit 0.52 42.0 3.33e-01 95.3% 79.3%
3606753 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.51 44.0 2.79e-01 100.0% 51.9%
3204035 1.1.17.4 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S64 0.51 41.0 2.72e-01 100.0% 28.5%
4944288 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.50 42.0 3.66e-01 96.9% 91.4%
3334761 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.50 37.0 3.31e-01 90.6% 53.7%