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OP751154.1__WAB09292.1__SEA_STELLA_52__00031

Bact-Vir

OP751154.1__WAB09292.1__SEA_STELLA_52__00031

Identity

Accession:
OP751154 ↗
Kingdom:
phage

Quality

70.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-59
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.77 66.0 6.51e-01 100.0% 90.2%
6tmfT00 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.75 64.0 6.24e-01 100.0% 85.9%
1x9fD00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.71 52.0 3.87e-01 78.9% 80.0%
7p2yd01 1.10.520.20 Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › N-terminal domain of the delta subunit of the F1F0-ATP synthase 0.69 60.0 5.02e-01 98.2% 98.0%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.69 58.0 5.80e-01 100.0% 98.3%
2vqxA02 1.10.390.10 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Neutral Protease Domain 2 0.68 49.0 3.57e-01 78.9% 30.5%
1w36C06 1.10.10.990 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 55.0 5.16e-01 96.5% 77.8%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.67 53.0 5.21e-01 87.7% 91.9%
2af7D00 1.20.1290.10 Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like 0.66 51.0 4.16e-01 98.2% 43.0%
3nrwA00 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.65 56.0 4.68e-01 100.0% 59.6%
4wbyA02 1.10.3090.10 Mainly Alpha › Orthogonal Bundle › cca-adding enzyme, domain 2 › cca-adding enzyme, domain 2 0.64 44.0 2.94e-01 93.0% 17.4%
4fcgA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.64 42.0 2.63e-01 100.0% 12.8%
4xxiA00 1.10.490.20 Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins 0.64 49.0 3.70e-01 86.0% 72.1%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.63 53.0 4.78e-01 96.5% 91.4%
2lbfB01 1.10.10.1410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 47.0 4.52e-01 91.2% 69.6%
4ap2B01 1.20.1310.10 Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats 0.63 50.0 3.88e-01 89.5% 54.5%
3g2bA00 1.10.10.1150 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Coenzyme PQQ synthesis protein D (PqqD) 0.62 45.0 4.02e-01 93.0% 51.1%
2vxdA00 1.10.10.2100 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain 0.62 50.0 5.10e-01 98.2% 98.1%
3w04A00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.61 51.0 3.40e-01 98.2% 61.7%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.60 52.0 3.97e-01 100.0% 90.7%
6q3wB02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.60 45.0 3.26e-01 100.0% 28.3%
3sqnA02 1.10.1790.40 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › 0.60 52.0 4.16e-01 100.0% 95.8%
6pw7A01 1.10.238.180 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.60 43.0 4.00e-01 78.9% 77.3%
2r0rB00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.59 47.0 4.45e-01 100.0% 76.9%
4p63D00 3.40.910.10 Alpha Beta › 3-Layer(aba) Sandwich › Deoxyhypusine Synthase › Deoxyhypusine synthase 0.57 50.0 3.15e-01 100.0% 26.9%
3ro3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.57 44.0 3.16e-01 82.5% 29.6%
4qiwB04 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.57 48.0 3.57e-01 100.0% 41.7%
3fm9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.56 45.0 4.19e-01 94.7% 71.8%
2of7A02 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.56 46.0 3.61e-01 100.0% 59.3%
1vhnA02 1.10.1200.80 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Putative flavin oxidoreducatase; domain 2 0.55 44.0 4.23e-01 94.7% 84.5%
5hayA02 1.25.40.440 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Nucleoporin, helical domain, central subdomain 0.54 45.0 4.03e-01 100.0% 64.6%
3s6jE02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.54 44.0 4.16e-01 98.2% 76.8%
2lhrA00 1.20.58.1270 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 38.0 3.49e-01 89.5% 53.8%
4ociA01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 37.0 3.63e-01 77.2% 81.8%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.53 45.0 4.04e-01 96.5% 90.1%
6axgA01 1.20.870.10 Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 0.53 43.0 3.87e-01 100.0% 61.8%
3vkgA15 1.10.8.1220 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.53 41.0 3.60e-01 89.5% 78.7%
4a17U01 1.10.287.310 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.53 40.0 3.62e-01 86.0% 59.7%
2elcA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.53 40.0 3.87e-01 96.5% 73.1%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.52 43.0 3.96e-01 91.2% 80.0%
2rkkA01 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.52 46.0 3.37e-01 100.0% 76.3%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.51 43.0 3.25e-01 93.0% 79.0%
2etdA00 1.20.1440.20 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › LemA-like domain 0.50 40.0 3.04e-01 87.7% 61.0%
7wf8B01 1.10.167.10 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 0.50 43.0 3.44e-01 100.0% 59.5%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3286911 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 81.0 7.51e-01 100.0% 90.0%
3886349 195.1.1.0 alpha complex topology › NusB-like › NusB-like › NusB-like 0.77 66.0 4.72e-01 100.0% 33.3%
3632341 101.1.1.176 alpha arrays › HTH › HTH › Three-helical HTH › DEK_C 0.75 64.0 6.18e-01 100.0% 87.7%
3394135 108.1.1.73 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 0.74 51.0 4.37e-01 71.9% 60.0%
4271175 101.1.2.498 alpha arrays › HTH › HTH › winged helix domain › PF25870 0.74 62.0 4.84e-01 100.0% 43.0%
3337658 610.3.1.3 alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain › tRNA_synt_1c_R1 0.73 64.0 4.47e-01 100.0% 30.8%
3269592 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.72 62.0 5.51e-01 100.0% 68.2%
3573598 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.71 61.0 4.99e-01 100.0% 67.3%
3274434 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.71 61.0 5.40e-01 100.0% 68.2%
3273958 198.1.1.10 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin 0.70 60.0 5.33e-01 100.0% 68.2%
3736802 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 54.0 5.34e-01 100.0% 83.3%
3735853 101.7.1.1 alpha arrays › HTH › DEK-C › DEK-C › DEK_C 0.69 56.0 5.53e-01 96.5% 90.0%
3247967 101.1.1.28 alpha arrays › HTH › HTH › Three-helical HTH › SWIRM 0.69 58.0 5.13e-01 100.0% 64.4%
3924903 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 56.0 5.49e-01 96.5% 84.6%
4015114 101.1.17.0 alpha arrays › HTH › HTH › FF domain 0.69 57.0 4.93e-01 100.0% 61.0%
4513921 101.7.1.1 alpha arrays › HTH › DEK-C › DEK-C › DEK_C 0.69 56.0 5.55e-01 96.5% 91.7%
3248091 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.68 58.0 5.17e-01 100.0% 71.8%
3275982 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.68 58.0 4.02e-01 100.0% 39.5%
3740124 101.1.17.19 alpha arrays › HTH › HTH › FF domain › DEK_C 0.68 54.0 5.46e-01 94.7% 98.2%
3332576 4964.1.1.2 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol 0.68 60.0 4.45e-01 100.0% 44.1%
3397182 101.7.1.1 alpha arrays › HTH › DEK-C › DEK-C › DEK_C 0.68 54.0 5.49e-01 94.7% 98.2%
3333032 101.7.1.1 alpha arrays › HTH › DEK-C › DEK-C › DEK_C 0.68 55.0 5.51e-01 96.5% 93.1%
3261028 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.67 57.0 5.09e-01 100.0% 68.2%
3623097 101.1.1.176 alpha arrays › HTH › HTH › Three-helical HTH › DEK_C 0.67 57.0 5.42e-01 100.0% 82.9%
3177082 101.7.1.1 alpha arrays › HTH › DEK-C › DEK-C › DEK_C 0.67 52.0 5.16e-01 91.2% 85.0%
3825757 101.35.1.23 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.67 57.0 5.52e-01 100.0% 92.3%
3474421 101.1.2.365 alpha arrays › HTH › HTH › winged helix domain › DEK_C 0.67 54.0 5.18e-01 100.0% 80.0%
3444283 101.1.2.365 alpha arrays › HTH › HTH › winged helix domain › DEK_C 0.66 53.0 5.43e-01 96.5% 100.0%
3174373 101.1.2.780 alpha arrays › HTH › HTH › winged helix domain › PF31199 0.66 54.0 5.12e-01 100.0% 77.3%
5080963 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.66 55.0 4.96e-01 100.0% 72.9%
4978069 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.65 54.0 3.82e-01 98.2% 57.3%
3918763 101.1.1.117 alpha arrays › HTH › HTH › Three-helical HTH › CHDCT2 0.65 47.0 3.92e-01 77.2% 60.0%
3982775 101.1.1.202 alpha arrays › HTH › HTH › Three-helical HTH › HTH_21 0.65 53.0 5.25e-01 100.0% 90.0%
3428642 101.35.1.0 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.64 51.0 5.19e-01 98.2% 98.2%
4506746 4964.1.1.0 alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I 0.64 51.0 3.69e-01 96.5% 60.5%
4075945 195.1.1.1 alpha complex topology › NusB-like › NusB-like › NusB-like › NusB 0.64 53.0 4.11e-01 100.0% 42.1%
4024067 7579.1.1.6 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 0.63 54.0 3.48e-01 100.0% 19.3%
3390249 4003.1.1.0 alpha arrays › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins › Helical bundle domain in YebC-like proteins 0.63 51.0 4.77e-01 100.0% 72.0%
4342098 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.63 47.0 4.10e-01 86.0% 58.9%
5055566 3922.1.1.0 alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.62 54.0 4.38e-01 100.0% 81.7%
3396075 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.62 51.0 4.72e-01 100.0% 83.7%
3713190 4336.2.1.1 alpha duplicates or obligate multimers › YheA/YmcA-like › Protein SUS1 › Protein SUS1 › EnY2 0.62 42.0 3.62e-01 71.9% 60.0%
4203130 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.61 43.0 3.47e-01 75.4% 53.9%
3943035 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.61 51.0 4.98e-01 100.0% 93.8%
3843294 904.1.1.0 few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain 0.60 40.0 2.82e-01 70.2% 22.7%
3396463 3919.1.1.0 alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.59 48.0 4.06e-01 96.5% 53.0%
3675882 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.57 47.0 3.28e-01 98.2% 25.6%
4369617 633.8.1.3 alpha bundles › Bromodomain-like › MAST3 pre-PK domain-like › MAST3 pre-PK domain-like › FUSC 0.56 48.0 3.61e-01 100.0% 66.7%
4016163 108.1.1.27 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_6 0.55 44.0 3.73e-01 91.2% 80.0%
3699904 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.55 41.0 3.64e-01 84.2% 65.6%
4238416 603.1.1.125 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PLU-1 0.54 43.0 3.59e-01 100.0% 50.0%
4027904 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.54 46.0 3.68e-01 94.7% 89.1%
3316066 192.4.1.42 alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › WAV3_C 0.54 45.0 3.80e-01 98.2% 53.3%
3907843 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.54 46.0 4.01e-01 100.0% 87.8%
3871809 198.1.1.2 alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 0.53 37.0 3.43e-01 78.9% 65.9%
4977808 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.53 41.0 3.84e-01 84.2% 81.4%
3490393 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 44.0 4.00e-01 98.2% 82.5%
3456188 109.7.1.10 alpha superhelices › Repetitive alpha hairpins › Cytochrome c oxidase subunit E › Cytochrome c oxidase subunit E › WAV3_C 0.52 45.0 4.18e-01 98.2% 74.7%
4297295 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.52 40.0 3.70e-01 84.2% 72.0%
3491800 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.52 39.0 3.10e-01 91.2% 37.7%
3814361 109.4.1.1256 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3 0.51 38.0 2.64e-01 87.7% 21.8%
3697295 4336.1.1.5 alpha duplicates or obligate multimers › YheA/YmcA-like › YheA/YmcA-like › YheA/YmcA-like › HAM1_N 0.50 39.0 3.57e-01 84.2% 66.7%