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OP751378.1__WAK44681.1__vBAmePPT11V19_00055__00055

Bact-Vir

OP751378.1__WAK44681.1__vBAmePPT11V19_00055__00055

Identity

Accession:
OP751378 ↗
Kingdom:
phage

Quality

95.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-72
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24886.2 best DUF7740 34.0 3.80e-08 90.3% 81.8%
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3t6gB00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.75 64.0 5.23e-01 95.8% 96.3%
4r42A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.73 53.0 3.93e-01 77.8% 78.1%
2ib0A01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.72 53.0 4.31e-01 77.8% 88.9%
2yfaB01 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.71 60.0 5.13e-01 95.8% 93.3%
4etrB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.69 50.0 4.21e-01 76.4% 86.1%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.68 51.0 3.73e-01 80.6% 66.5%
2xevB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.68 47.0 3.93e-01 75.0% 41.9%
1wfdA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.68 46.0 4.24e-01 70.8% 67.7%
5cwkA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 49.0 3.75e-01 77.8% 33.3%
3qkyA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.67 47.0 3.23e-01 77.8% 21.1%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.66 47.0 3.78e-01 76.4% 85.3%
7qihA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.66 43.0 3.90e-01 76.4% 48.5%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.65 46.0 3.81e-01 76.4% 81.9%
1wn0A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.65 56.0 4.68e-01 100.0% 60.3%
4wzxA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.65 47.0 4.69e-01 77.8% 89.3%
2np5D00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.64 48.0 3.76e-01 80.6% 81.0%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.64 46.0 4.24e-01 77.8% 64.9%
4ga0A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.64 43.0 3.47e-01 75.0% 35.0%
2kmgA00 3.30.70.3580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein 0.63 47.0 3.77e-01 79.2% 71.8%
1elrA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.63 47.0 3.95e-01 80.6% 73.4%
1w9cA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.63 52.0 3.44e-01 93.1% 31.2%
3iqcA00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.63 53.0 4.61e-01 100.0% 90.8%
2oxlA00 1.20.5.5260 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.63 43.0 4.61e-01 72.2% 85.5%
3k59A07 1.10.132.60 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › B family DNA polymerase, thumb domain 0.63 47.0 3.81e-01 81.9% 93.0%
2lxlA00 1.25.40.270 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Vacuolar protein sorting-associated protein vta1 0.62 45.0 3.56e-01 79.2% 38.0%
1yo7A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.62 45.0 3.88e-01 79.2% 69.2%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.62 53.0 4.50e-01 100.0% 92.0%
2oocB00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.61 54.0 4.81e-01 100.0% 72.4%
3cskA02 3.30.540.30 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › 0.61 53.0 4.17e-01 100.0% 75.3%
4o1pD02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.61 50.0 3.55e-01 95.8% 46.8%
2z1qB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.61 42.0 3.45e-01 72.2% 75.0%
1u89A00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.61 44.0 3.65e-01 79.2% 59.0%
5zw7A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.60 44.0 3.49e-01 77.8% 67.1%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 40.0 4.24e-01 81.9% 81.0%
2dbaA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 45.0 3.85e-01 83.3% 62.7%
2if4A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.59 42.0 3.49e-01 76.4% 70.7%
3b4qA00 1.10.1200.100 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › conserved protein domain from corynebacterium diphtheriae 0.58 44.0 4.22e-01 86.1% 69.0%
4g1tA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.58 41.0 4.31e-01 77.8% 88.5%
4it4A02 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.56 40.0 3.81e-01 77.8% 73.6%
3kkbA00 1.20.120.880 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain 0.56 48.0 4.05e-01 97.2% 81.0%
2wfpA03 1.10.441.10 Mainly Alpha › Orthogonal Bundle › Phosphomannose Isomerase; domain 2 › Phosphomannose Isomerase, domain 2 0.55 46.0 4.11e-01 100.0% 92.9%
4hhxA00 1.20.81.30 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F 0.55 47.0 4.25e-01 100.0% 93.3%
1e7uA05 1.10.1070.11 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain 0.54 47.0 3.54e-01 100.0% 69.6%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.54 41.0 3.59e-01 100.0% 53.5%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.51 41.0 3.26e-01 95.8% 92.2%
3zciA00 1.20.58.1660 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.51 38.0 2.91e-01 83.3% 59.2%
2yguC00 1.10.238.190 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › 0.51 41.0 3.55e-01 91.7% 83.1%
4xvcA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 44.0 2.96e-01 100.0% 74.4%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3288703 150.1.1.5 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF305 0.75 55.0 4.25e-01 77.8% 87.7%
4567796 632.7.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.74 53.0 5.22e-01 73.6% 82.7%
3304563 150.1.1.164 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › MENTAL 0.69 51.0 3.85e-01 79.2% 58.2%
3948672 639.2.1.1 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) › YmgB 0.68 45.0 4.98e-01 76.4% 87.3%
4933335 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.68 49.0 4.73e-01 76.4% 80.0%
5067468 4133.1.1.0 alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like 0.66 44.0 4.61e-01 93.1% 75.4%
3613133 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.66 48.0 4.54e-01 76.4% 84.7%
5072449 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.66 48.0 4.52e-01 77.8% 75.6%
5046459 192.29.1.0 alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.66 55.0 4.33e-01 95.8% 91.5%
3647808 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 48.0 4.11e-01 77.8% 50.4%
3845930 633.23.1.22 alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.65 47.0 3.85e-01 77.8% 72.1%
3550247 109.3.1.0 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.64 53.0 3.19e-01 95.8% 21.4%
4948369 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.64 44.0 3.66e-01 73.6% 74.6%
3929825 633.21.1.0 alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 0.63 46.0 3.94e-01 77.8% 69.2%
4577904 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.63 50.0 4.90e-01 88.9% 91.3%
3807513 633.4.1.0 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor 0.63 46.0 3.81e-01 79.2% 67.4%
60062 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.63 52.0 3.43e-01 93.1% 31.2%
2642640 601.1.1.0 alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin 0.63 47.0 3.77e-01 81.9% 53.7%
4964563 5060.2.1.1 alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF 0.62 53.0 4.66e-01 100.0% 87.8%
3998454 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.62 45.0 4.18e-01 79.2% 85.3%
3669567 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.61 52.0 3.81e-01 94.4% 42.1%
3520913 5054.1.1.8 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 0.61 52.0 3.06e-01 95.8% 35.2%
4995756 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 44.0 4.58e-01 97.2% 86.2%
3997012 604.30.1.1 alpha bundles › Spectrin repeat-like › Gamma-secretase subunit PEN-2 › Gamma-secretase subunit PEN-2 › PEN-2 0.60 44.0 4.02e-01 76.4% 62.1%
3642678 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.60 44.0 3.41e-01 79.2% 64.7%
5024001 604.6.1.0 alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain 0.60 43.0 3.94e-01 77.8% 72.0%
4982026 150.1.1.209 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF7121 0.60 43.0 3.59e-01 79.2% 57.1%
4489939 101.35.1.4 alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 0.59 42.0 4.43e-01 94.4% 90.0%
3586746 603.1.1.133 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › DUF7799 0.59 43.0 3.72e-01 79.2% 85.8%
3870558 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 43.0 3.73e-01 79.2% 80.8%
4926793 4266.2.1.1 alpha bundles › Hyaluronidase domain-like › TTHA0068-like › TTHA0068-like › DUF309 0.59 49.0 4.34e-01 94.4% 78.2%
3709914 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.59 47.0 3.04e-01 88.9% 52.7%
4037687 639.2.1.0 alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) 0.59 40.0 4.12e-01 77.8% 74.3%
3930837 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.59 42.0 3.65e-01 77.8% 84.2%
4959891 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.59 47.0 3.54e-01 87.5% 65.6%
2326858 109.4.1.200 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_14 0.59 40.0 3.46e-01 76.4% 43.2%
3642615 109.4.1.297 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_EMC2 0.58 43.0 3.59e-01 80.6% 45.9%
3631605 610.1.1.1 alpha arrays › ERP29 C domain-like › ERP29 C domain-like › ERP29 C domain-like › ERp29 0.58 48.0 4.25e-01 93.1% 88.0%
3679393 109.4.1.68 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Coatomer_E 0.58 44.0 3.79e-01 83.3% 60.8%
4025954 3758.1.1.0 alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins 0.58 49.0 3.47e-01 100.0% 74.0%
3599809 3279.1.1.0 alpha arrays › Helical domain in 5'->3' exoribonucleases › Helical domain in 5'->3' exoribonucleases › Helical domain in 5'->3' exoribonucleases 0.58 46.0 3.12e-01 86.1% 24.2%
4157292 3317.1.1.2 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB 0.57 36.0 3.89e-01 73.6% 76.7%
4995087 3076.1.1.1 alpha arrays › Putative triphosphoribosyl-dephospho-coA synthase › Putative triphosphoribosyl-dephospho-coA synthase › Putative triphosphoribosyl-dephospho-coA synthase › CitG 0.56 48.0 3.42e-01 100.0% 96.3%
3514718 604.1.1.1 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin 0.56 41.0 3.59e-01 79.2% 87.8%
3965758 150.1.2.21 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › DUF455 0.56 48.0 3.32e-01 100.0% 40.4%
4992256 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 40.0 3.68e-01 77.8% 85.9%
3207635 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.53 37.0 3.04e-01 76.4% 56.2%
3997759 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 37.0 2.38e-01 76.4% 25.5%
3248488 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.52 39.0 2.75e-01 84.7% 75.3%
4065157 2005.1.1.25 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › HIGH_NTase1 0.52 44.0 2.81e-01 97.2% 17.7%
55469 611.3.1.0 alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 0.52 38.0 3.74e-01 80.6% 84.0%
3728265 4095.1.1.1 alpha bundles › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › ATP-dependent DNA ligase DNA-binding domain › DNA_ligase_A_N 0.51 44.0 3.59e-01 100.0% 49.0%
3571651 164.1.1.12 alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › PF27073 0.51 42.0 4.19e-01 97.2% 89.3%