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OP751378.1__WAK44696.1__vBAmePPT11V19_00070__00070

Bact-Vir

OP751378.1__WAK44696.1__vBAmePPT11V19_00070__00070

Identity

Accession:
OP751378 ↗
Kingdom:
phage

Quality

81.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Alteromonas_phage_vB_AmeP_PT11-V19

TaxID: 2996182

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-69
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 53.0 5.18e-01 90.6% 95.8%
1btkA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 51.0 3.85e-01 85.9% 65.6%
4a6fA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 48.0 4.15e-01 81.2% 83.8%
1v5pA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 47.0 4.11e-01 79.7% 89.3%
2ptfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 52.0 4.05e-01 92.2% 98.6%
4nswA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.64 47.0 4.08e-01 82.8% 82.6%
4hhvA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 47.0 4.07e-01 81.2% 79.6%
2iabA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 48.0 3.70e-01 82.8% 82.5%
4qa8A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.62 48.0 3.41e-01 87.5% 60.0%
2htiA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 46.0 3.73e-01 81.2% 89.7%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.62 52.0 4.67e-01 96.9% 66.7%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.61 48.0 3.52e-01 92.2% 35.7%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.61 48.0 4.92e-01 92.2% 100.0%
2dhjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 45.0 3.79e-01 85.9% 75.2%
1mixA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 44.0 3.97e-01 79.7% 81.7%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 51.0 5.22e-01 98.4% 98.4%
2k2jA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 43.0 3.65e-01 79.7% 82.1%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 46.0 4.42e-01 87.5% 85.5%
2da0A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 46.0 3.86e-01 87.5% 77.2%
2rovA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 44.0 3.72e-01 84.4% 86.3%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.58 44.0 4.33e-01 82.8% 98.5%
4bi3A01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.58 49.0 4.39e-01 96.9% 68.1%
1bakA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 42.0 3.56e-01 81.2% 68.9%
3wyfE00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 42.0 3.39e-01 82.8% 59.2%
1ne8A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.57 47.0 3.93e-01 93.8% 81.9%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 43.0 3.50e-01 85.9% 70.1%
1r0mA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.57 42.0 3.41e-01 81.2% 95.4%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 46.0 3.97e-01 92.2% 65.4%
2nr4A01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 47.0 3.82e-01 96.9% 49.6%
2imlA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 43.0 3.70e-01 89.1% 57.5%
1ukfA00 3.90.70.20 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › 0.55 46.0 3.43e-01 98.4% 51.1%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 3.55e-01 79.7% 79.8%
3mpxA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.75e-01 85.9% 78.4%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.55 40.0 3.66e-01 82.8% 97.9%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 45.0 3.97e-01 98.4% 67.3%
4g29A00 3.10.670.10 Alpha Beta › Roll › Secreted effector protein ssei fold › Secreted effector protein ssei. 0.54 41.0 3.18e-01 85.9% 51.2%
2zl7A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.54 43.0 3.99e-01 96.9% 100.0%
3lq6A02 2.40.30.120 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses 0.54 43.0 3.75e-01 96.9% 99.1%
3bc9A03 2.40.30.140 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.54 38.0 3.42e-01 76.6% 71.0%
2wdtC02 3.30.1490.420 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ubiquitin carboxyl-terminal hydrolase, domain 2 0.53 45.0 3.95e-01 98.4% 96.0%
1a78A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.53 44.0 3.58e-01 96.9% 94.8%
2z4hA01 2.40.128.300 Mainly Beta › Beta Barrel › Lipocalin › NlpE, N-terminal domain 0.53 39.0 3.70e-01 81.2% 84.8%
3ihpA03 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 43.0 2.76e-01 93.8% 29.6%
2rceA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.52 43.0 3.77e-01 98.4% 59.4%
2vpaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 3.00e-01 92.2% 43.1%
2rlpA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.52 35.0 3.46e-01 81.2% 67.2%
3kwlA01 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.52 37.0 3.28e-01 76.6% 77.3%
2opjA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 39.0 3.67e-01 89.1% 84.9%
1xv2C01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.51 45.0 3.77e-01 100.0% 95.5%
4hwmA00 2.40.128.500 Mainly Beta › Beta Barrel › Lipocalin › YedD-like protein 0.51 39.0 3.26e-01 84.4% 95.7%
1rl4B00 3.90.45.10 Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase 0.51 37.0 2.85e-01 79.7% 73.7%
1n26A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.78e-01 96.9% 73.1%
3kyaA02 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 40.0 2.51e-01 87.5% 95.9%
2ox7A02 2.30.30.290 Mainly Beta › Roll › SH3 type barrels. › YopX-like domains 0.50 41.0 4.04e-01 93.8% 92.8%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3185321 4.1.1.51 ↗ beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.74 61.0 5.79e-01 90.6% 93.3%
3511457 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.70 52.0 4.09e-01 79.7% 73.3%
3954254 4.1.1.387 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_Rv0428c 0.70 57.0 5.70e-01 92.2% 96.9%
3177027 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.69 51.0 3.73e-01 79.7% 61.1%
3908519 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.68 52.0 4.17e-01 82.8% 67.2%
3749038 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 52.0 4.09e-01 85.9% 82.9%
3743988 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 48.0 3.94e-01 78.1% 68.0%
3900957 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.66 53.0 4.26e-01 90.6% 67.7%
3830352 4.1.1.94 ↗ beta barrels › SH3 › SH3 › SH3 › SAWADEE 0.65 57.0 5.22e-01 100.0% 97.6%
3882494 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 51.0 4.22e-01 85.9% 71.3%
3562938 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 51.0 4.15e-01 87.5% 72.8%
3503446 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 48.0 3.57e-01 81.2% 62.3%
3270877 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.65 49.0 3.89e-01 84.4% 67.1%
3484357 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 48.0 4.08e-01 81.2% 72.7%
5075917 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.64 55.0 4.23e-01 96.9% 96.7%
3879755 4.1.1.169 ↗ beta barrels › SH3 › SH3 › SH3 › DUF4819 0.64 54.0 4.67e-01 98.4% 76.2%
3566291 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 50.0 3.94e-01 85.9% 77.8%
5052232 2498.1.1.0 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" 0.64 49.0 3.09e-01 85.9% 38.8%
3475361 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 46.0 3.76e-01 79.7% 70.8%
3276134 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 46.0 3.78e-01 79.7% 71.2%
3889522 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 48.0 3.99e-01 84.4% 72.5%
4660084 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.63 53.0 5.27e-01 98.4% 95.7%
3472332 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 46.0 4.90e-01 84.4% 94.5%
3473585 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.62 47.0 3.73e-01 84.4% 65.0%
3487898 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 47.0 3.81e-01 84.4% 68.5%
3274216 220.1.1.49 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Carm_PH 0.62 45.0 3.60e-01 78.1% 58.5%
3410486 220.1.1.57 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_20 0.62 46.0 3.70e-01 81.2% 69.2%
4024290 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 48.0 3.79e-01 85.9% 86.2%
3258463 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 48.0 4.59e-01 87.5% 100.0%
3511551 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 51.0 5.28e-01 93.8% 100.0%
3570680 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.61 47.0 2.92e-01 85.9% 24.4%
3996000 220.1.1.167 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29707 0.60 44.0 3.72e-01 79.7% 67.0%
1177249 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 46.0 3.84e-01 84.4% 75.4%
3920536 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 45.0 3.47e-01 82.8% 52.5%
3938714 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.60 44.0 3.59e-01 79.7% 63.2%
3719783 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 47.0 4.32e-01 93.8% 90.4%
3178444 220.1.1.112 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 0.59 44.0 3.53e-01 82.8% 62.9%
4099186 219.1.1.21 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 0.59 50.0 3.63e-01 96.9% 50.0%
3171221 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 44.0 3.56e-01 85.9% 75.7%
3502290 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.69e-01 93.8% 96.7%
4976152 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.57 47.0 3.61e-01 92.2% 43.9%
3483566 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 43.0 3.77e-01 84.4% 73.3%
3847345 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 44.0 3.84e-01 87.5% 84.8%
3529264 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.57 38.0 3.95e-01 84.4% 73.3%
3373330 4.1.1.337 ↗ beta barrels › SH3 › SH3 › SH3 › CSD_RNase_II 0.57 45.0 4.39e-01 93.8% 88.0%
5002629 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.56 46.0 3.72e-01 96.9% 48.6%
5008468 219.1.1.13 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.56 45.0 3.51e-01 93.8% 88.1%
3253075 220.1.1.8 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.56 41.0 3.45e-01 79.7% 69.2%
4958701 1.1.5.17 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N 0.56 45.0 3.69e-01 95.3% 50.4%
3454710 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.56 47.0 3.35e-01 98.4% 66.4%
3578794 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 43.0 3.69e-01 84.4% 73.3%
3777215 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 40.0 3.59e-01 79.7% 80.0%
3777243 220.1.1.161 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26659 0.56 40.0 3.27e-01 78.1% 60.7%
4018795 220.1.1.43 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SIN1_PH 0.55 40.0 3.33e-01 79.7% 68.5%
3594546 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 42.0 3.67e-01 85.9% 80.0%
3267345 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.55 40.0 4.28e-01 84.4% 94.5%
4625374 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.54 45.0 3.19e-01 98.4% 72.2%
3823929 220.1.1.163 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF7046 0.54 41.0 3.45e-01 85.9% 65.0%
3616618 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 41.0 2.60e-01 85.9% 77.9%
3228794 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.53 40.0 3.97e-01 84.4% 85.7%
3501905 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 39.0 3.53e-01 85.9% 82.0%
3491787 633.23.1.0 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin 0.52 41.0 2.83e-01 84.4% 64.8%
4467867 3784.1.1.0 ↗ a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related 0.51 45.0 3.47e-01 100.0% 70.3%