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OP751378.1__WAK44698.1__vBAmePPT11V19_00072__00072
Bact-VirOP751378.1__WAK44698.1__vBAmePPT11V19_00072__00072
Identity
- Accession:
- OP751378 ↗
- Kingdom:
- phage
Quality
71.1
mean pLDDT
Taxonomy
TaxID: 2996182
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-79_134-149
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qkwA00 | 1.20.1270.140 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AvrPto | 0.73 | 34.0 | 3.22e-01 | 100.0% | 37.6% |
| 3h3mA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.71 | 35.0 | 3.50e-01 | 98.9% | 46.1% |
| 1wjtA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.71 | 35.0 | 3.29e-01 | 100.0% | 39.8% |
| 2ihr101 | 1.20.58.410 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor | 0.68 | 35.0 | 3.24e-01 | 100.0% | 39.6% |
| 1gqeA01 | 1.20.58.410 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor | 0.67 | 38.0 | 3.42e-01 | 100.0% | 43.4% |
| 3rguB00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.61 | 36.0 | 3.63e-01 | 100.0% | 58.6% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 36.0 | 3.41e-01 | 100.0% | 51.5% |
| 4ap2B01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.58 | 43.0 | 3.80e-01 | 79.3% | 74.6% |
| 3tmpA01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.58 | 40.0 | 3.44e-01 | 73.6% | 66.7% |
| 1o20A01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.56 | 42.0 | 2.97e-01 | 78.2% | 61.9% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.56 | 36.0 | 3.89e-01 | 86.2% | 79.2% |
| 4izzB02 | 1.10.10.1680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain | 0.55 | 33.0 | 3.70e-01 | 100.0% | 77.9% |
| 3q4oA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.54 | 41.0 | 3.33e-01 | 81.6% | 95.3% |
| 5x56B00 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.54 | 48.0 | 4.58e-01 | 100.0% | 99.0% |
| 4jbeB01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.53 | 40.0 | 2.88e-01 | 81.6% | 57.4% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.52 | 46.0 | 4.19e-01 | 100.0% | 95.7% |
| 3l39A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.52 | 46.0 | 3.52e-01 | 100.0% | 58.0% |
| 1nu7D01 | 1.20.120.750 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Staphylcoagulase, helix bundle domain 1 | 0.51 | 41.0 | 3.61e-01 | 90.8% | 74.8% |
| 2fupA00 | 1.20.58.300 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like | 0.50 | 39.0 | 3.50e-01 | 83.9% | 98.4% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4254477 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.84 | 39.0 | 3.75e-01 | 100.0% | 41.0% |
| 3617244 | 109.4.1.839 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Maestro_HEAT | 0.63 | 43.0 | 2.87e-01 | 72.4% | 29.1% |
| 3504301 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 35.0 | 3.24e-01 | 100.0% | 45.5% |
| 3360311 | 601.18.1.18 ↗ | alpha bundles › Four-helical up-and-down bundle › Oxygen-evolving enhancer protein 3 › Oxygen-evolving enhancer protein 3 › DUF7880 | 0.59 | 54.0 | 4.61e-01 | 100.0% | 77.9% |
| 3785916 | 3559.1.1.40 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Mediator of RNA polymerase II transcription subunit 22 › Bap31 | 0.59 | 36.0 | 3.30e-01 | 100.0% | 48.2% |
| 3178149 | 604.1.1.96 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Bap31 | 0.58 | 36.0 | 3.23e-01 | 100.0% | 47.0% |
| 4441546 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.57 | 34.0 | 3.25e-01 | 100.0% | 52.0% |
| 4019169 | 109.4.1.313 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UTP20_N | 0.57 | 41.0 | 3.27e-01 | 79.3% | 83.5% |
| 4314734 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.56 | 42.0 | 2.93e-01 | 78.2% | 58.6% |
| 4010101 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.56 | 43.0 | 3.11e-01 | 81.6% | 62.4% |
| 4597475 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.56 | 42.0 | 3.12e-01 | 81.6% | 54.2% |
| 4055690 | 7524.1.1.0 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like | 0.56 | 42.0 | 3.26e-01 | 81.6% | 59.5% |
| 4492381 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.56 | 42.0 | 3.10e-01 | 81.6% | 57.1% |
| 4093008 | 192.29.1.157 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › MG280 | 0.56 | 49.0 | 3.72e-01 | 100.0% | 91.4% |
| 4101078 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.56 | 42.0 | 3.02e-01 | 81.6% | 55.7% |
| 1901867 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.55 | 41.0 | 3.10e-01 | 81.6% | 62.8% |
| 4423562 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.54 | 41.0 | 3.03e-01 | 81.6% | 59.6% |
| 4124070 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.54 | 41.0 | 2.67e-01 | 81.6% | 34.2% |
| 4208420 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.53 | 40.0 | 2.88e-01 | 81.6% | 53.0% |
| 4303272 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.53 | 40.0 | 2.61e-01 | 81.6% | 33.4% |
| 4136151 | 4006.1.1.1 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › PCRF | 0.53 | 31.0 | 3.04e-01 | 100.0% | 51.0% |
| 3896599 | 7524.1.1.1 ↗ | a/b three-layered sandwiches › ALDH-like › ALDH-like › ALDH-like › Aldedh | 0.52 | 40.0 | 2.83e-01 | 81.6% | 51.3% |
| 3686421 | 616.1.1.0 ↗ | alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain | 0.52 | 38.0 | 3.82e-01 | 79.3% | 98.9% |
| 5051912 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.51 | 35.0 | 3.87e-01 | 93.1% | 95.4% |
| 3877612 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.51 | 31.0 | 2.71e-01 | 100.0% | 39.3% |
D2
medium
residues 80-133
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5b7cA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 48.0 | 3.81e-01 | 79.6% | 95.5% |
| 3zheA02 | 1.25.40.760 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 44.0 | 2.99e-01 | 94.4% | 42.0% |
| 2yi9A05 | 1.20.1270.270 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › VP1, C-terminal extension domain | 0.52 | 35.0 | 3.18e-01 | 85.2% | 50.6% |
| 3ceiA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.50 | 36.0 | 3.49e-01 | 77.8% | 69.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3498362 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 45.0 | 2.65e-01 | 83.3% | 19.8% |
| 4886439 | 7577.1.1.0 ↗ | a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases | 0.57 | 35.0 | 3.05e-01 | 70.4% | 38.8% |