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OP751378.1__WAK44705.1__vBAmePPT11V19_00079__00079
Bact-VirOP751378.1__WAK44705.1__vBAmePPT11V19_00079__00079
Identity
- Accession:
- OP751378 ↗
- Kingdom:
- phage
Quality
84.0
mean pLDDT
Taxonomy
TaxID: 2996182
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-69
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2n99A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.54 | 41.0 | 3.94e-01 | 82.1% | 89.5% |
| 1jr7A00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.52 | 41.0 | 2.72e-01 | 88.1% | 82.4% |
| 3e0jB00 | 3.90.1030.20 | Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain | 0.52 | 38.0 | 2.99e-01 | 98.5% | 37.1% |
| 1ezrA00 | 3.90.245.10 | Alpha Beta › Alpha-Beta Complex › Inosine-uridine Nucleoside N-ribohydrolase; Chain A › Ribonucleoside hydrolase-like | 0.51 | 39.0 | 2.55e-01 | 82.1% | 35.6% |
| 3ifuA02 | 3.90.70.60 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Porcine arterivirus-type cysteine proteinase alpha domain | 0.51 | 37.0 | 3.18e-01 | 79.1% | 88.8% |
| 1wltA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 37.0 | 2.88e-01 | 82.1% | 60.8% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.50 | 40.0 | 3.43e-01 | 95.5% | 60.6% |
| 3kdrA02 | 3.40.140.120 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › | 0.50 | 40.0 | 3.38e-01 | 94.0% | 86.6% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3509141 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.63 | 43.0 | 3.65e-01 | 70.1% | 56.2% |
| 3585492 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.56 | 40.0 | 3.35e-01 | 73.1% | 76.4% |
| 4511150 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.54 | 40.0 | 4.21e-01 | 85.1% | 90.0% |
| 4948799 | 281.1.1.0 ↗ | a+b three layers › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase › AraD-like aldolase/epimerase | 0.52 | 37.0 | 2.98e-01 | 77.6% | 63.2% |
| 3505477 | 2492.1.1.2 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB | 0.52 | 43.0 | 3.22e-01 | 98.5% | 82.0% |
| 5004080 | 886.1.1.2 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › GyrI-like | 0.50 | 38.0 | 3.11e-01 | 85.1% | 85.7% |
| 3582732 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 38.0 | 3.20e-01 | 85.1% | 80.0% |
D2
medium
residues 73-112
Domain cluster:
representative
CATH (54)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.90 | 82.0 | 7.24e-01 | 100.0% | 78.6% |
| 4m4zA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.86 | 74.0 | 7.05e-01 | 97.5% | 97.9% |
| 2ckkA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 74.0 | 6.60e-01 | 100.0% | 86.0% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 76.0 | 6.42e-01 | 100.0% | 67.2% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.82 | 74.0 | 6.63e-01 | 100.0% | 81.5% |
| 1lckA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.82 | 70.0 | 6.23e-01 | 100.0% | 89.8% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.81 | 69.0 | 6.02e-01 | 100.0% | 89.1% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.81 | 72.0 | 6.10e-01 | 100.0% | 72.3% |
| 2rqrA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.81 | 68.0 | 4.93e-01 | 100.0% | 45.4% |
| 1sf9A02 | 2.30.30.340 | Mainly Beta › Roll › SH3 type barrels. › Hypothetical protein YfhH like domains | 0.80 | 69.0 | 6.34e-01 | 100.0% | 75.9% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 64.0 | 6.05e-01 | 92.5% | 85.4% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.77 | 65.0 | 5.53e-01 | 100.0% | 77.1% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.74 | 62.0 | 4.97e-01 | 100.0% | 65.5% |
| 2awnC02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.74 | 57.0 | 4.71e-01 | 90.0% | 75.6% |
| 3feoB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 61.0 | 4.94e-01 | 100.0% | 57.8% |
| 2l5qA01 | 2.30.30.730 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 59.0 | 5.63e-01 | 100.0% | 84.0% |
| 5zr6A02 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.71 | 58.0 | 4.90e-01 | 100.0% | 84.2% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.70 | 59.0 | 5.11e-01 | 100.0% | 66.7% |
| 3k8uA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.70 | 58.0 | 4.15e-01 | 100.0% | 36.6% |
| 3ervA00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.68 | 55.0 | 3.60e-01 | 100.0% | 36.0% |
| 3mzkB01 | 6.20.50.30 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.66 | 45.0 | 4.66e-01 | 75.0% | 81.6% |
| 4a0fB02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.66 | 48.0 | 3.28e-01 | 85.0% | 60.9% |
| 3d31A03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.65 | 49.0 | 4.35e-01 | 95.0% | 73.2% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.64 | 53.0 | 3.05e-01 | 100.0% | 23.1% |
| 3r8qA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 48.0 | 3.86e-01 | 87.5% | 93.3% |
| 3f7wA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.64 | 48.0 | 3.90e-01 | 92.5% | 52.7% |
| 1fhoA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 49.0 | 3.76e-01 | 100.0% | 59.7% |
| 4c26A00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.63 | 47.0 | 4.15e-01 | 90.0% | 51.5% |
| 3nixB00 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.63 | 50.0 | 2.96e-01 | 100.0% | 37.7% |
| 2dleA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.62 | 46.0 | 3.72e-01 | 85.0% | 94.2% |
| 3a54A01 | 2.40.50.340 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 48.0 | 3.83e-01 | 92.5% | 76.7% |
| 3ic9A03 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.61 | 48.0 | 3.61e-01 | 100.0% | 94.3% |
| 1jheA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.60 | 49.0 | 3.60e-01 | 100.0% | 33.9% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.60 | 47.0 | 4.08e-01 | 95.0% | 74.6% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.60 | 44.0 | 2.50e-01 | 92.5% | 10.3% |
| 1x5aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 44.0 | 3.54e-01 | 85.0% | 90.1% |
| 1vhzA01 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.59 | 42.0 | 2.84e-01 | 77.5% | 20.2% |
| 5u25A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 46.0 | 3.49e-01 | 100.0% | 75.4% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.59 | 46.0 | 2.99e-01 | 97.5% | 21.2% |
| 1noyA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.58 | 42.0 | 3.09e-01 | 85.0% | 67.2% |
| 3vm7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 38.0 | 2.93e-01 | 70.0% | 25.5% |
| 4e2oA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 42.0 | 3.43e-01 | 82.5% | 37.5% |
| 3d1cA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 46.0 | 3.48e-01 | 100.0% | 96.5% |
| 3lzhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 43.0 | 3.52e-01 | 92.5% | 94.5% |
| 2e8eA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.56 | 41.0 | 2.93e-01 | 80.0% | 24.2% |
| 3c96A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 42.0 | 2.99e-01 | 100.0% | 44.0% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 42.0 | 4.07e-01 | 90.0% | 81.6% |
| 7byjA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 40.0 | 3.39e-01 | 95.0% | 87.4% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.55 | 41.0 | 2.97e-01 | 87.5% | 24.3% |
| 1xdiA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 41.0 | 2.78e-01 | 100.0% | 63.3% |
| 2rk0A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 40.0 | 3.04e-01 | 92.5% | 80.2% |
| 2wm1A00 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.52 | 40.0 | 2.42e-01 | 90.0% | 14.5% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.50 | 35.0 | 3.29e-01 | 95.0% | 78.9% |
| 6aonA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 36.0 | 2.89e-01 | 100.0% | 97.6% |
ECOD (73)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3398496 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.92 | 83.0 | 7.42e-01 | 100.0% | 80.0% |
| 3852545 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.91 | 83.0 | 7.13e-01 | 100.0% | 73.3% |
| 1408049 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.90 | 82.0 | 5.48e-01 | 100.0% | 32.4% |
| 3514556 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.90 | 79.0 | 6.54e-01 | 100.0% | 70.0% |
| 3701950 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 79.0 | 6.84e-01 | 100.0% | 70.0% |
| 3619619 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 78.0 | 6.46e-01 | 100.0% | 70.0% |
| 3922426 | 4.1.1.363 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 | 0.88 | 77.0 | 5.44e-01 | 100.0% | 36.7% |
| 3843554 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.87 | 76.0 | 6.33e-01 | 100.0% | 77.1% |
| 1146672 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.87 | 75.0 | 5.44e-01 | 100.0% | 39.6% |
| 3503291 | 4.1.1.12 ↗ | beta barrels › SH3 › SH3 › SH3 › PWWP | 0.86 | 77.0 | 5.50e-01 | 100.0% | 40.0% |
| 3550644 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 78.0 | 6.94e-01 | 100.0% | 80.0% |
| 1140051 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.86 | 75.0 | 7.06e-01 | 100.0% | 95.9% |
| None | — | 0.86 | 77.0 | 4.04e-01 | 100.0% | 3.3% | |
| 3909317 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.86 | 70.0 | 6.48e-01 | 90.0% | 98.0% |
| 3464886 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.85 | 75.0 | 6.57e-01 | 100.0% | 81.7% |
| 5000308 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.85 | 75.0 | 7.06e-01 | 100.0% | 89.8% |
| 4251669 | 4.1.1.76 ↗ | beta barrels › SH3 › SH3 › SH3 › NdhO | 0.85 | 75.0 | 6.18e-01 | 100.0% | 87.1% |
| 3928136 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 75.0 | 6.51e-01 | 100.0% | 83.3% |
| 3688068 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.84 | 74.0 | 4.97e-01 | 100.0% | 30.0% |
| 3747790 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.84 | 71.0 | 6.39e-01 | 95.0% | 94.5% |
| 4668742 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 70.0 | 7.02e-01 | 95.0% | 100.0% |
| 3793311 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.84 | 71.0 | 6.30e-01 | 100.0% | 93.3% |
| 3575066 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.83 | 72.0 | 6.33e-01 | 100.0% | 95.0% |
| 3627275 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 72.0 | 6.32e-01 | 100.0% | 95.0% |
| 3788021 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.83 | 72.0 | 5.86e-01 | 100.0% | 73.3% |
| 3625555 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.83 | 69.0 | 6.28e-01 | 97.5% | 100.0% |
| 3900236 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 71.0 | 6.26e-01 | 100.0% | 90.0% |
| 3909202 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 71.0 | 5.96e-01 | 100.0% | 77.1% |
| 3850131 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.82 | 71.0 | 5.59e-01 | 100.0% | 63.5% |
| 3230400 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 70.0 | 6.05e-01 | 100.0% | 90.8% |
| 3603357 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 71.0 | 6.43e-01 | 100.0% | 78.2% |
| 3905176 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.82 | 71.0 | 6.06e-01 | 100.0% | 83.1% |
| 3934192 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 73.0 | 6.31e-01 | 100.0% | 83.3% |
| 3924038 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 70.0 | 5.72e-01 | 100.0% | 78.7% |
| 3225816 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.81 | 70.0 | 5.87e-01 | 100.0% | 87.1% |
| 171891 | 4.1.1.110 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 | 0.81 | 70.0 | 6.34e-01 | 100.0% | 80.0% |
| 3308545 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.80 | 63.0 | 4.17e-01 | 87.5% | 29.4% |
| 3576443 | 4.1.1.54 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_2 | 0.80 | 68.0 | 5.75e-01 | 100.0% | 87.1% |
| 603 | 4.1.1.62 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1811 | 0.80 | 69.0 | 6.37e-01 | 100.0% | 77.4% |
| 3964846 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.80 | 69.0 | 5.46e-01 | 100.0% | 47.1% |
| 3520308 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 68.0 | 5.21e-01 | 100.0% | 57.9% |
| 4833642 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.80 | 69.0 | 6.73e-01 | 100.0% | 93.3% |
| 3626615 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 65.0 | 4.72e-01 | 92.5% | 50.9% |
| 4031947 | 4.1.1.62 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF1811 | 0.79 | 66.0 | 6.20e-01 | 97.5% | 82.0% |
| 3908789 | 4.1.1.354 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY, PF28930 | 0.79 | 67.0 | 4.04e-01 | 100.0% | 23.2% |
| 3931805 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 65.0 | 6.08e-01 | 95.0% | 90.0% |
| 3249603 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 69.0 | 5.58e-01 | 100.0% | 80.0% |
| 3992514 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 63.0 | 6.39e-01 | 90.0% | 90.0% |
| 3363448 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.78 | 66.0 | 5.28e-01 | 100.0% | 68.2% |
| 3839849 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.78 | 65.0 | 5.61e-01 | 100.0% | 60.0% |
| 3725260 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.77 | 66.0 | 5.55e-01 | 100.0% | 77.1% |
| 3384082 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 54.0 | 5.71e-01 | 75.0% | 94.3% |
| 4003473 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 61.0 | 5.31e-01 | 92.5% | 58.5% |
| 3313403 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.75 | 54.0 | 4.92e-01 | 77.5% | 61.8% |
| 3204055 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.75 | 59.0 | 5.11e-01 | 90.0% | 84.6% |
| 3317821 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 63.0 | 5.19e-01 | 97.5% | 86.7% |
| 3376597 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 56.0 | 5.48e-01 | 85.0% | 97.8% |
| 4562486 | 219.1.1.18 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 | 0.71 | 58.0 | 4.03e-01 | 100.0% | 31.0% |
| 4947695 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 56.0 | 4.70e-01 | 100.0% | 81.3% |
| 4669027 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.68 | 56.0 | 3.54e-01 | 100.0% | 23.3% |
| 4259069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 57.0 | 3.65e-01 | 100.0% | 20.5% |
| 4951103 | 2.1.1.366 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3006 | 0.66 | 50.0 | 4.27e-01 | 90.0% | 58.7% |
| 3882163 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 49.0 | 3.05e-01 | 90.0% | 24.3% |
| 3653972 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 47.0 | 4.57e-01 | 90.0% | 100.0% |
| 4950216 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.57 | 42.0 | 4.05e-01 | 85.0% | 75.0% |
| 4979007 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.55 | 40.0 | 2.87e-01 | 82.5% | 92.9% |
| 4968507 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.55 | 39.0 | 2.83e-01 | 80.0% | 30.7% |
| 4068978 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.54 | 39.0 | 3.50e-01 | 95.0% | 57.3% |
| 4340865 | 4071.1.1.1 ↗ | beta barrels › BH3618-like › BH3618-like › BH3618-like › FliW | 0.53 | 41.0 | 3.07e-01 | 100.0% | 75.6% |
| 4107506 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.53 | 38.0 | 3.56e-01 | 95.0% | 66.2% |
| 4159666 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 38.0 | 3.05e-01 | 95.0% | 39.4% |
| 3406523 | 316.1.1.6 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Mab-21 | 0.52 | 40.0 | 2.63e-01 | 95.0% | 44.1% |
| 3963153 | 324.1.1.1 ↗ | a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC | 0.51 | 38.0 | 2.65e-01 | 85.0% | 83.6% |
D3
medium
residues 119-150
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6lumD01 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.90 | 76.0 | 5.04e-01 | 100.0% | 25.6% |
| 4g12A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.88 | 73.0 | 4.71e-01 | 100.0% | 21.5% |
| 4i9oA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.88 | 76.0 | 5.69e-01 | 100.0% | 41.0% |
| 4a18O00 | 3.30.390.110 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.87 | 73.0 | 4.76e-01 | 96.9% | 23.1% |
| 1zoyD00 | 1.20.1300.10 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Fumarate reductase/succinate dehydrogenase, transmembrane subunit | 0.86 | 71.0 | 5.05e-01 | 100.0% | 31.4% |
| 3k2nA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.85 | 67.0 | 4.23e-01 | 100.0% | 17.5% |
| 2lqxA00 | 6.10.250.1700 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.80 | 62.0 | 5.99e-01 | 100.0% | 78.0% |
| 2fhxA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.77 | 58.0 | 3.51e-01 | 100.0% | 11.8% |
| 2v6eA01 | 1.10.287.3180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.76 | 59.0 | 4.77e-01 | 100.0% | 42.7% |
| 4r42A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.72 | 57.0 | 3.46e-01 | 90.6% | 15.0% |
| 3qybA02 | 1.10.8.270 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › putative rabgap domain of human tbc1 domain family member 14 like domains | 0.71 | 53.0 | 3.97e-01 | 93.8% | 31.2% |
| 4hkaA02 | 1.10.287.3810 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.71 | 58.0 | 4.99e-01 | 93.8% | 58.8% |
| 3i83A02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.69 | 52.0 | 3.69e-01 | 100.0% | 40.6% |
| 1jr8A00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.66 | 51.0 | 3.72e-01 | 96.9% | 29.5% |
| 2g7rA00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.66 | 55.0 | 4.07e-01 | 96.9% | 72.1% |
| 3dfgA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 54.0 | 4.78e-01 | 96.9% | 70.8% |
| 1rqgA02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.64 | 48.0 | 3.21e-01 | 93.8% | 18.8% |
| 2glzA00 | 3.30.1330.130 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › | 0.63 | 52.0 | 3.45e-01 | 100.0% | 40.3% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.60 | 50.0 | 3.88e-01 | 100.0% | 63.6% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3667041 | 3443.1.1.0 ↗ | alpha duplicates or obligate multimers › Get5 carboxyl domain › Get5 carboxyl domain › Get5 carboxyl domain | 0.97 | 88.0 | 6.49e-01 | 100.0% | 42.7% |
| 3427565 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.93 | 81.0 | 6.57e-01 | 100.0% | 53.3% |
| 4101335 | 2006.1.4.8 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_5 | 0.90 | 77.0 | 4.55e-01 | 100.0% | 14.2% |
| 2630625 | 5069.1.3.1 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › Sdh_cyt | 0.90 | 76.0 | 4.87e-01 | 100.0% | 21.9% |
| 5029822 | 3352.1.1.1 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3 | 0.87 | 73.0 | 4.02e-01 | 100.0% | 6.7% |
| 5007120 | 223.1.1.14 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 | 0.86 | 66.0 | 3.83e-01 | 87.5% | 10.2% |
| 4436874 | 397.7.1.1 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › Vicilin_N | 0.80 | 64.0 | 5.98e-01 | 100.0% | 71.1% |
| 3226467 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.70 | 56.0 | 3.66e-01 | 90.6% | 21.5% |