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OP753453.1__WAB24400.1__X__00025
Bact-VirOP753453.1__WAB24400.1__X__00025
Identity
- Accession:
- OP753453 ↗
- Kingdom:
- phage
Quality
81.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-62
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2v6zM00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.79 | 71.0 | 6.50e-01 | 100.0% | 80.0% |
| 3sykA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 67.0 | 5.81e-01 | 100.0% | 84.4% |
| 3d8bB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 66.0 | 5.88e-01 | 96.6% | 89.0% |
| 2e58A01 | 1.20.120.1180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.74 | 63.0 | 6.02e-01 | 96.6% | 100.0% |
| 6p10B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 60.0 | 5.20e-01 | 91.4% | 79.1% |
| 3deeA01 | 1.10.150.690 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DUF2063 | 0.72 | 63.0 | 5.57e-01 | 100.0% | 77.9% |
| 2z4sA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.72 | 57.0 | 5.44e-01 | 93.1% | 79.2% |
| 4ex6A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.71 | 49.0 | 4.66e-01 | 89.7% | 62.7% |
| 3nufB00 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.71 | 58.0 | 4.74e-01 | 93.1% | 83.0% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 62.0 | 5.50e-01 | 100.0% | 72.3% |
| 4od4A01 | 1.10.357.140 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase | 0.68 | 55.0 | 4.14e-01 | 93.1% | 91.0% |
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 56.0 | 5.35e-01 | 96.6% | 80.0% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.67 | 50.0 | 5.27e-01 | 82.8% | 100.0% |
| 3kbbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.67 | 49.0 | 4.62e-01 | 98.3% | 65.7% |
| 6h7bA01 | 1.10.1900.10 | Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › c-terminal domain of poly(a) binding protein | 0.66 | 55.0 | 5.11e-01 | 94.8% | 77.0% |
| 1xg7A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.64 | 51.0 | 3.94e-01 | 98.3% | 37.8% |
| 2q14B01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.64 | 52.0 | 3.54e-01 | 96.6% | 52.4% |
| 2fi1A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.64 | 45.0 | 4.41e-01 | 87.9% | 68.8% |
| 3ilkA02 | 1.10.8.590 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 46.0 | 4.41e-01 | 79.3% | 77.9% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.58 | 47.0 | 2.82e-01 | 96.6% | 72.6% |
| 1k6kA00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.58 | 50.0 | 3.81e-01 | 100.0% | 45.8% |
| 2yxlA01 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.57 | 44.0 | 3.29e-01 | 84.5% | 88.8% |
| 2gutA00 | 1.10.246.20 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Coactivator CBP, KIX domain | 0.57 | 46.0 | 4.27e-01 | 91.4% | 84.4% |
| 1qrvA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.57 | 40.0 | 3.77e-01 | 75.9% | 61.6% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 47.0 | 3.65e-01 | 94.8% | 47.0% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.56 | 42.0 | 4.35e-01 | 86.2% | 90.9% |
| 2p0tA01 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.56 | 40.0 | 3.71e-01 | 77.6% | 84.2% |
| 3wgbC02 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.56 | 43.0 | 3.99e-01 | 91.4% | 94.0% |
| 4mtdD01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 42.0 | 3.71e-01 | 84.5% | 81.8% |
| 2w9mB03 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.54 | 46.0 | 4.17e-01 | 98.3% | 98.8% |
| 1iv8A04 | 1.10.10.470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Maltooligosyl trehalose synthase; domain 4 | 0.52 | 41.0 | 3.53e-01 | 89.7% | 66.0% |
| 4gxbA02 | 1.20.80.60 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.52 | 35.0 | 3.51e-01 | 84.5% | 69.4% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.51 | 39.0 | 3.44e-01 | 93.1% | 56.5% |
| 1wvfA01 | 3.30.43.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase, domain 2 | 0.51 | 40.0 | 3.36e-01 | 91.4% | 91.7% |
| 3bz6A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 35.0 | 3.22e-01 | 93.1% | 55.1% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3580179 | 103.11.1.1 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N | 0.84 | 74.0 | 7.00e-01 | 98.3% | 90.0% |
| 4471800 | 148.1.3.237 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF30483 | 0.81 | 70.0 | 6.39e-01 | 94.8% | 74.7% |
| 168577 | 148.1.3.9 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT | 0.79 | 71.0 | 6.50e-01 | 100.0% | 80.0% |
| 3914186 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.77 | 65.0 | 5.67e-01 | 94.8% | 80.0% |
| 3244215 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.76 | 64.0 | 6.36e-01 | 93.1% | 90.0% |
| 5059610 | 148.1.3.403 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RNA_pol_Rpb1_5 | 0.76 | 65.0 | 4.73e-01 | 94.8% | 39.4% |
| 3254601 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 64.0 | 5.76e-01 | 94.8% | 76.2% |
| 3486206 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 63.0 | 5.81e-01 | 94.8% | 78.7% |
| 3924344 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.75 | 66.0 | 5.95e-01 | 100.0% | 77.5% |
| 2464370 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.74 | 62.0 | 5.17e-01 | 94.8% | 70.5% |
| 3766732 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.74 | 64.0 | 5.63e-01 | 96.6% | 72.9% |
| 3214242 | 148.1.3.9 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT | 0.73 | 64.0 | 5.94e-01 | 100.0% | 81.3% |
| 4163949 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.73 | 61.0 | 5.56e-01 | 96.6% | 75.0% |
| 3385989 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.72 | 62.0 | 5.81e-01 | 94.8% | 84.3% |
| 4458447 | 148.1.3.21 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 | 0.72 | 60.0 | 5.71e-01 | 94.8% | 84.3% |
| 4032438 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.72 | 64.0 | 5.31e-01 | 100.0% | 98.0% |
| 3076062 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 60.0 | 5.23e-01 | 93.1% | 67.8% |
| 4246144 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 60.0 | 5.43e-01 | 94.8% | 73.8% |
| 3590722 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.71 | 63.0 | 5.09e-01 | 100.0% | 82.7% |
| 3278610 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 58.0 | 5.54e-01 | 96.6% | 78.6% |
| 4626446 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.71 | 63.0 | 5.16e-01 | 100.0% | 57.1% |
| 4025082 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.70 | 62.0 | 5.13e-01 | 100.0% | 57.1% |
| 3491969 | 148.1.3.9 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Dpoe2NT | 0.68 | 60.0 | 5.42e-01 | 100.0% | 72.5% |
| 4383903 | 148.1.3.18 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › TIP49_C | 0.68 | 57.0 | 5.42e-01 | 94.8% | 80.0% |
| 4014868 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.68 | 59.0 | 4.80e-01 | 98.3% | 66.4% |
| 4532715 | 101.8.1.2 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › Anticodon_2 | 0.67 | 56.0 | 4.10e-01 | 94.8% | 81.8% |
| 5009203 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 49.0 | 4.94e-01 | 87.9% | 80.0% |
| 3387918 | 207.9.1.3 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pentapeptide repeats › Pentapeptide repeats › Pentapeptide_3 | 0.66 | 54.0 | 3.44e-01 | 94.8% | 21.9% |
| 4032062 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.66 | 55.0 | 4.55e-01 | 96.6% | 81.8% |
| 3975669 | 162.1.1.0 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD | 0.64 | 54.0 | 4.47e-01 | 94.8% | 91.4% |
| 3410120 | 320.4.1.6 ↗ | a+b two layers › R3H domain-like › PUB domain › PUB domain › SPATA2_PUB-like | 0.63 | 49.0 | 3.46e-01 | 91.4% | 80.0% |
| 4575406 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.63 | 46.0 | 3.15e-01 | 79.3% | 24.7% |
| 4990055 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 48.0 | 4.89e-01 | 91.4% | 98.2% |
| 3538509 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.59 | 42.0 | 3.49e-01 | 75.9% | 44.8% |
| 3411504 | 148.1.3.179 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_BCS1 | 0.59 | 47.0 | 4.62e-01 | 94.8% | 83.1% |
| 3501700 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 40.0 | 3.66e-01 | 74.1% | 97.5% |
| 5001110 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.56 | 45.0 | 3.12e-01 | 98.3% | 26.8% |
| 4998572 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 50.0 | 4.39e-01 | 100.0% | 69.4% |
| 164077 | 101.1.2.127 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 | 0.56 | 50.0 | 4.13e-01 | 100.0% | 72.3% |
| 3387249 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.55 | 46.0 | 3.23e-01 | 94.8% | 42.1% |
| 3703060 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 43.0 | 4.24e-01 | 89.7% | 86.2% |
| 5046208 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 46.0 | 4.23e-01 | 100.0% | 96.0% |
| 3613393 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 35.0 | 3.29e-01 | 75.9% | 53.8% |
| 3593172 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 35.0 | 3.20e-01 | 75.9% | 50.6% |
| 4025625 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 45.0 | 4.32e-01 | 100.0% | 95.7% |
| 3285577 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.51 | 38.0 | 2.91e-01 | 86.2% | 46.7% |
| 4995581 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.51 | 42.0 | 3.56e-01 | 93.1% | 76.0% |
| 3398316 | 101.1.2.248 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF4777 | 0.50 | 44.0 | 3.93e-01 | 100.0% | 92.9% |