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OP753453.1__WAB24442.1__X__00067

Bact-Vir

OP753453.1__WAB24442.1__X__00067

Identity

Accession:
OP753453 ↗
Kingdom:
phage

Quality

82.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Clostridium_phage_E1

TaxID: 2999105

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 80-189
PDB
Domain cluster: representative
CATH (15)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4avrA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.77 63.0 6.77e-01 98.2% 100.0%
3czbA01 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.75 65.0 5.51e-01 100.0% 59.4%
1qcsA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.74 54.0 6.15e-01 99.1% 100.0%
3hu1A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.67 49.0 5.24e-01 99.1% 87.5%
3sumB00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.64 59.0 5.45e-01 98.2% 89.0%
2kqaA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.61 55.0 5.36e-01 96.4% 92.5%
1vw3C01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 47.0 4.48e-01 100.0% 71.8%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 31.0 3.23e-01 100.0% 52.9%
2waaA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 34.0 3.33e-01 100.0% 52.8%
3thpA02 2.60.120.1520 Mainly Beta › Sandwich › Jelly Rolls › 0.56 32.0 2.89e-01 100.0% 40.8%
2vdrB02 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.56 30.0 2.72e-01 100.0% 37.3%
1u3eM02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 28.0 3.52e-01 77.3% 85.3%
1vq8B02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.52 47.0 4.42e-01 100.0% 83.9%
3p42A03 3.10.560.10 Alpha Beta › Roll › Outer membrane lipoprotein wza fold like › Outer membrane lipoprotein wza domain like 0.50 31.0 3.65e-01 98.2% 90.5%
2lw3A00 2.60.40.2880 Mainly Beta › Sandwich › Immunoglobulin-like › MmpS1-5, C-terminal soluble domain 0.50 26.0 2.87e-01 96.4% 58.9%
ECOD (35)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5083293 1.1.2.13 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › 3D 0.77 63.0 6.46e-01 100.0% 89.5%
3974469 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.77 63.0 6.80e-01 99.1% 100.0%
3165363 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.76 64.0 5.49e-01 100.0% 58.8%
4370157 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.75 64.0 5.79e-01 100.0% 69.2%
4396535 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.74 52.0 6.10e-01 99.1% 100.0%
3486347 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.69 51.0 5.53e-01 100.0% 89.5%
3010131 1.1.2.9 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › DPBB_1 0.69 60.0 6.16e-01 100.0% 95.3%
1568967 1.1.2.24 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › KWL1 0.69 64.0 5.29e-01 99.1% 64.5%
3617423 1.1.2.19 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › IML1_N 0.69 54.0 5.83e-01 99.1% 96.8%
4995354 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 51.0 5.72e-01 98.2% 100.0%
3312403 1.1.2.24 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › KWL1 0.67 62.0 5.96e-01 98.2% 88.0%
3409396 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.67 50.0 5.10e-01 100.0% 81.0%
3611762 1.1.2.7 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.66 50.0 5.32e-01 99.1% 90.5%
4024752 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.65 49.0 5.13e-01 100.0% 86.0%
3248572 72.1.1.0 ↗ beta sandwiches › gamma-Crystallin-like › gamma-Crystallin-like › gamma-Crystallin-like 0.65 34.0 3.90e-01 100.0% 68.8%
3180055 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.64 53.0 4.50e-01 97.3% 56.2%
3597196 1.1.2.0 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi 0.64 51.0 5.46e-01 100.0% 97.9%
3384940 1.1.2.24 ↗ beta barrels › cradle loop barrel › RIFT-related › double psi › KWL1 0.61 56.0 5.32e-01 99.1% 85.6%
4011239 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.60 40.0 4.57e-01 100.0% 92.5%
3253012 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.58 29.0 3.02e-01 95.5% 51.0%
4000175 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 30.0 3.43e-01 95.5% 67.1%
3972951 1.1.7.88 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25963 0.56 37.0 4.32e-01 100.0% 97.3%
3598125 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 32.0 3.83e-01 100.0% 86.7%
3222026 10.4.1.9 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.54 32.0 3.18e-01 100.0% 55.7%
3838372 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.54 33.0 3.99e-01 84.5% 95.7%
5056535 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 33.0 3.79e-01 100.0% 86.3%
3794468 10.4.1.1 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB 0.53 33.0 3.30e-01 100.0% 61.8%
3893165 10.4.1.23 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CDCP1_CUB_6 0.53 32.0 3.17e-01 100.0% 57.4%
3882665 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.53 33.0 3.93e-01 84.5% 93.3%
3237442 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 43.0 4.50e-01 100.0% 98.0%
2321850 11.1.1.245 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_6 0.52 32.0 3.61e-01 100.0% 82.7%
3219055 10.4.1.32 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_2nd 0.52 32.0 3.06e-01 100.0% 53.6%
4153575 67.1.1.0 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain 0.51 32.0 3.22e-01 85.5% 61.8%
3323128 67.1.1.1 ↗ beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C 0.51 32.0 3.29e-01 84.5% 63.9%
3807153 221.1.1.88 ↗ a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › CLU_N 0.50 34.0 3.52e-01 100.0% 75.0%
D2 medium residues 1-78
PDB
Domain cluster: representative