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OP793884.1__UZV41185.1__vBVpaMR16F_119__00119
Bact-VirOP793884.1__UZV41185.1__vBVpaMR16F_119__00119
Identity
- Accession:
- OP793884 ↗
- Kingdom:
- phage
Quality
69.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 72-131
Domain cluster:
rep: OX241437.1__CAH9012358.1__VP424E501_P0039__00039__D8-62
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wdzA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.77 | 62.0 | 4.14e-01 | 88.3% | 22.9% |
| 7odyC01 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.75 | 37.0 | 3.15e-01 | 78.3% | 30.4% |
| 3nyjA00 | 1.20.120.770 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Amyloid precursor protein, E2 domain | 0.74 | 67.0 | 4.69e-01 | 100.0% | 55.2% |
| 2hkvA01 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.74 | 56.0 | 4.22e-01 | 81.7% | 61.0% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 54.0 | 5.11e-01 | 81.7% | 66.2% |
| 7p3rA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.73 | 63.0 | 3.89e-01 | 96.7% | 17.2% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 58.0 | 4.47e-01 | 100.0% | 79.7% |
| 4toiA02 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 46.0 | 5.06e-01 | 73.3% | 89.6% |
| 6qumA04 | 1.10.1140.10 | Mainly Alpha › Orthogonal Bundle › Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3 › Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3 | 0.67 | 50.0 | 3.83e-01 | 83.3% | 38.3% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.66 | 57.0 | 5.23e-01 | 100.0% | 72.7% |
| 2lf0A01 | 4.10.860.10 | Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain | 0.66 | 46.0 | 4.63e-01 | 76.7% | 73.3% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 58.0 | 4.67e-01 | 95.0% | 51.8% |
| 1eteA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.65 | 43.0 | 3.31e-01 | 76.7% | 29.9% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.65 | 54.0 | 4.95e-01 | 96.7% | 69.2% |
| 4l8eA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 55.0 | 4.47e-01 | 91.7% | 61.8% |
| 3anwB00 | 1.20.58.2050 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.65 | 57.0 | 4.07e-01 | 95.0% | 37.0% |
| 2yv9B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.65 | 50.0 | 3.88e-01 | 85.0% | 63.4% |
| 4fxdA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.64 | 47.0 | 3.47e-01 | 80.0% | 30.7% |
| 3f4mA00 | 1.20.1440.160 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tumor necrosis factor alpha-induced protein 8-like | 0.64 | 51.0 | 3.71e-01 | 85.0% | 62.3% |
| 4c9bB00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 44.0 | 2.90e-01 | 81.7% | 30.3% |
| 3u64A00 | 1.25.40.920 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TRAP transporter T-component | 0.56 | 49.0 | 3.15e-01 | 96.7% | 54.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3968910 | 159.1.2.4 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related › MazG-like | 0.87 | 47.0 | 3.90e-01 | 81.7% | 34.7% |
| 4961508 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.80 | 60.0 | 5.58e-01 | 90.0% | 64.0% |
| 4612826 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.79 | 62.0 | 5.54e-01 | 90.0% | 62.5% |
| 3406033 | 3860.1.1.319 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › LETM1_RBD | 0.77 | 62.0 | 4.67e-01 | 95.0% | 39.2% |
| 4673 | 192.7.1.4 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Val_tRNA-synt_C | 0.76 | 60.0 | 5.81e-01 | 86.7% | 75.8% |
| 3320255 | 605.3.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Nonstructural protein ns2, Nep, M1-binding domain › Nonstructural protein ns2, Nep, M1-binding domain | 0.75 | 50.0 | 5.48e-01 | 73.3% | 84.0% |
| 3742018 | 7094.1.1.2 ↗ | alpha bundles › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › Paddle domain of mitochondrial dynamin › LIS_MGM1 | 0.74 | 59.0 | 5.00e-01 | 85.0% | 77.9% |
| 4962781 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.74 | 64.0 | 5.87e-01 | 95.0% | 74.7% |
| 3664323 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 54.0 | 3.30e-01 | 81.7% | 15.1% |
| 3393615 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.71 | 46.0 | 3.71e-01 | 93.3% | 36.4% |
| 4218502 | 605.1.1.279 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Spo7 | 0.70 | 59.0 | 4.91e-01 | 95.0% | 53.3% |
| 3228718 | 5001.1.1.27 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Sre | 0.66 | 56.0 | 3.49e-01 | 100.0% | 17.0% |
| 3471984 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.59 | 43.0 | 3.67e-01 | 80.0% | 59.0% |
| 3594735 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.58 | 45.0 | 3.48e-01 | 88.3% | 46.0% |
| 4879882 | 160.1.1.4 ↗ | alpha superhelices › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › C-terminal domain of alpha and beta subunits of F1 ATP synthase › ATP-synt_VA_C | 0.56 | 45.0 | 4.42e-01 | 90.0% | 84.8% |
| 3520936 | 109.4.1.1813 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › UBM | 0.55 | 44.0 | 2.67e-01 | 86.7% | 53.2% |