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OP795451.1__WAK44829.1__X__00007

Bact-Vir

OP795451.1__WAK44829.1__X__00007

Identity

Accession:
OP795451 ↗
Kingdom:
phage

Quality

61.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_PseuP_224

TaxID: 2996096

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-78
PDB
D2 high residues 89-142
PDB
D3 medium residues 157-189
PDB
D4 medium residues 200-243
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3w6bB00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.62 45.0 3.16e-01 86.4% 23.5%
4fo0A01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 47.0 3.24e-01 93.2% 37.3%
3gzfD00 1.10.150.420 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Coronavirus nonstructural protein 4 C-terminus 0.58 40.0 3.18e-01 97.7% 35.2%
2q5zB00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.58 49.0 3.92e-01 100.0% 47.9%
3f2bA08 1.10.150.870 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.57 42.0 3.04e-01 100.0% 26.3%
3d8bB02 1.10.8.60 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.54 38.0 3.16e-01 95.5% 40.2%
1m55A00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.54 45.0 3.03e-01 100.0% 24.4%
1dv0A00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.52 34.0 3.38e-01 84.1% 62.2%
7zcvA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.51 36.0 3.37e-01 88.6% 57.1%
1rvjH02 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.51 38.0 2.93e-01 93.2% 68.9%
1c6rA00 1.10.760.10 Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain 0.50 41.0 3.46e-01 100.0% 65.9%
1w27A01 1.10.275.10 Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) 0.50 41.0 2.69e-01 100.0% 47.7%
ECOD (9)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3178973 197.1.1.3 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › ACBP 0.67 46.0 3.42e-01 100.0% 26.4%
3917479 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.60 52.0 3.36e-01 100.0% 21.4%
3517701 10.12.1.101 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC, Cupin_8 0.55 47.0 2.87e-01 100.0% 22.9%
3497015 102.1.3.0 ↗ alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › PAP/OAS1 substrate-binding domain 0.55 45.0 3.49e-01 100.0% 39.8%
3710098 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.53 43.0 3.23e-01 100.0% 34.4%
3997214 614.1.1.6 ↗ alpha duplicates or obligate multimers › L27 domain › L27 domain › L27 domain › Moulting_cycle 0.52 39.0 3.55e-01 100.0% 56.9%
3722024 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.51 41.0 2.65e-01 100.0% 18.2%
4950238 192.5.1.39 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › DUF4405 0.51 42.0 3.51e-01 97.7% 52.9%
4032267 2.1.1.221 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF6414 0.51 39.0 3.13e-01 100.0% 38.2%