←Back to structures

OP807343.1__WBM89733.1__X__00003

Bact-Vir

OP807343.1__WBM89733.1__X__00003

Identity

Accession:
OP807343 ↗
Kingdom:
phage

Quality

96.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lacticaseibacillus_phage_P7.1

TaxID: 3016940

Cluster

View cluster (20 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-122
PDB
Domain cluster: rep: IMGVR_UViG_3300002219_000010-3300002219-SCADCLC_1000083292__D4-110
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04266.21 best ASCH 31.5 3.40e-07 77.7% 96.1%
CATH (33)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2dp9A01 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.87 69.0 7.58e-01 86.8% 100.0%
1t62B00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.83 67.0 6.02e-01 84.3% 79.8%
3iuwA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.81 50.0 6.17e-01 80.2% 94.9%
3s9xA00 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.81 63.0 5.72e-01 81.0% 81.1%
2kkuA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.80 75.0 7.17e-01 100.0% 94.2%
1xneA00 2.30.130.30 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. 0.76 59.0 6.12e-01 81.0% 95.6%
1i2dA02 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.68 54.0 4.66e-01 84.3% 72.9%
1v47A01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.68 55.0 5.32e-01 84.3% 97.7%
2gbsA00 3.10.590.10 Alpha Beta › Roll › ph1033 like fold › ph1033 like domains 0.68 62.0 5.85e-01 100.0% 82.8%
1x6vA02 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.67 53.0 4.82e-01 82.6% 84.2%
8a8gA01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.67 52.0 4.95e-01 81.0% 90.7%
1r3eA02 2.30.130.10 Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain 0.66 42.0 4.86e-01 84.3% 91.7%
1jhdA02 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.66 52.0 4.46e-01 84.3% 71.0%
2gksB01 3.10.400.10 Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase 0.65 52.0 4.92e-01 84.3% 94.3%
2aq6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 49.0 4.71e-01 84.3% 84.6%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.61 48.0 4.46e-01 84.3% 75.5%
2iabA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 47.0 4.51e-01 84.3% 74.1%
3fn5B00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.60 53.0 4.83e-01 97.5% 91.4%
1vl7A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 49.0 4.73e-01 89.3% 90.4%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 44.0 4.40e-01 82.6% 78.2%
2q9kA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.58 42.0 3.95e-01 86.0% 62.6%
5jv4A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 45.0 4.30e-01 84.3% 86.6%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 45.0 4.60e-01 84.3% 85.7%
1eq9A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.57 37.0 3.99e-01 81.0% 76.2%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 45.0 4.21e-01 85.1% 76.5%
1flmA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.56 44.0 4.44e-01 84.3% 85.2%
1p57B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 37.0 3.78e-01 81.0% 68.6%
1k28D03 2.40.30.150 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 0.56 40.0 4.52e-01 82.6% 95.8%
5fcrC02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 36.0 3.88e-01 81.0% 75.7%
6r2wH02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 36.0 3.76e-01 81.0% 75.5%
6mv4H02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.53 36.0 3.76e-01 81.0% 75.9%
4l82A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.52 41.0 3.79e-01 84.3% 76.9%
1yoaA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.51 41.0 3.72e-01 84.3% 77.4%
ECOD (72)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940231 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.98 94.0 9.00e-01 100.0% 88.7%
4229723 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.96 93.0 8.45e-01 100.0% 80.0%
4122172 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.95 91.0 9.02e-01 100.0% 96.8%
5016521 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.94 91.0 8.72e-01 100.0% 90.4%
4995643 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.94 91.0 8.45e-01 100.0% 89.0%
5079450 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.92 89.0 8.38e-01 100.0% 88.6%
2105336 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.92 88.0 8.07e-01 100.0% 82.6%
5032181 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.90 85.0 8.06e-01 100.0% 92.9%
5023730 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.86 80.0 7.43e-01 97.5% 89.0%
4970789 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.86 81.0 7.69e-01 100.0% 87.9%
5014837 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.86 81.0 7.06e-01 100.0% 86.2%
4950776 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.86 81.0 7.68e-01 100.0% 95.7%
5073325 1.1.9.7 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 0.85 80.0 7.61e-01 100.0% 89.3%
4957730 1.1.9.3 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE 0.84 79.0 7.46e-01 100.0% 85.7%
4940359 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.83 78.0 6.74e-01 100.0% 81.7%
5070577 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.83 65.0 6.78e-01 80.2% 97.3%
4990496 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.83 71.0 7.34e-01 90.1% 99.1%
4954540 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.83 64.0 6.76e-01 80.2% 94.5%
178 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.82 72.0 7.29e-01 100.0% 93.3%
4972117 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.82 66.0 6.68e-01 84.3% 92.5%
3208149 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.82 74.0 7.25e-01 100.0% 88.5%
4982523 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.82 67.0 6.92e-01 86.0% 99.1%
4013185 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.82 76.0 7.02e-01 100.0% 79.3%
4972120 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.81 66.0 6.91e-01 84.3% 98.2%
144031 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.81 63.0 5.72e-01 81.0% 81.1%
5006048 1.1.9.9 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH 0.81 70.0 7.29e-01 90.9% 99.1%
5077279 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.81 65.0 6.62e-01 84.3% 89.2%
5081834 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.81 76.0 7.33e-01 100.0% 94.1%
5042221 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.81 63.0 6.76e-01 81.8% 100.0%
4929736 1.1.9.22 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 0.81 76.0 6.58e-01 100.0% 87.4%
5059457 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.81 76.0 7.43e-01 100.0% 96.2%
5016524 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.81 76.0 7.08e-01 100.0% 84.1%
4995779 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.80 62.0 5.76e-01 80.2% 98.6%
5024536 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.80 75.0 7.03e-01 100.0% 91.0%
5035541 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.80 59.0 6.65e-01 80.2% 97.9%
5022429 1.1.9.35 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 0.80 68.0 6.78e-01 90.9% 93.6%
3199787 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.78 74.0 7.08e-01 100.0% 89.6%
4498250 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.78 65.0 6.82e-01 100.0% 96.4%
4967745 1.1.9.56 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30793 0.78 60.0 6.28e-01 100.0% 87.3%
4954659 1.1.9.22 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF1802 0.78 73.0 6.50e-01 100.0% 85.5%
4932847 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.77 67.0 6.65e-01 100.0% 88.8%
4564336 1.1.9.11 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 0.77 39.0 5.38e-01 82.6% 100.0%
4999514 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 69.0 6.42e-01 100.0% 96.0%
4960614 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 60.0 6.26e-01 83.5% 95.5%
3635966 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.75 61.0 6.30e-01 100.0% 90.4%
4014658 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.74 62.0 6.29e-01 100.0% 89.2%
4178357 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.73 39.0 5.12e-01 81.0% 96.9%
5022895 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.71 66.0 5.96e-01 100.0% 81.9%
3619452 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.70 66.0 5.99e-01 100.0% 89.0%
4132740 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.69 55.0 4.94e-01 84.3% 81.2%
4255729 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.68 55.0 4.85e-01 84.3% 81.2%
4968903 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.68 63.0 6.00e-01 100.0% 87.9%
172 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.68 55.0 5.33e-01 84.3% 98.5%
4967879 1.1.9.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain 0.68 50.0 5.60e-01 81.0% 97.9%
4959440 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.68 55.0 4.83e-01 84.3% 81.2%
4104106 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.68 54.0 4.75e-01 84.3% 81.7%
4946513 1.1.9.55 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › ATP-sulfurylase 0.67 54.0 4.89e-01 84.3% 82.5%
4589682 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.67 54.0 4.89e-01 84.3% 85.6%
5079294 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.67 54.0 4.88e-01 84.3% 83.7%
5010432 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.67 37.0 4.62e-01 80.2% 91.4%
4961858 1.1.9.3 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE 0.67 62.0 5.77e-01 100.0% 82.0%
4121844 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.67 54.0 4.70e-01 84.3% 75.4%
3418029 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.67 52.0 4.61e-01 82.6% 80.0%
3494415 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.66 53.0 4.45e-01 84.3% 69.0%
162 1.1.9.1 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA 0.66 42.0 5.01e-01 84.3% 100.0%
4089484 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.66 53.0 4.79e-01 84.3% 81.2%
4057360 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.66 53.0 4.78e-01 84.3% 83.1%
171 1.1.9.16 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 0.66 52.0 4.63e-01 84.3% 79.2%
3286515 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.59 46.0 4.46e-01 84.3% 82.9%
5028515 304.60.1.2 ↗ a+b two layers › Alpha-beta plaits › Ribosomal protein L10-like › Ribosomal protein L10-like › Ribosomal_L10 0.57 38.0 3.34e-01 86.8% 45.6%
2844732 1.1.5.8 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.56 44.0 4.37e-01 84.3% 86.4%
5051960 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.52 46.0 4.25e-01 97.5% 82.6%