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OP807344.1__WBM89797.1__X__00012
Bact-VirOP807344.1__WBM89797.1__X__00012
Identity
- Accession:
- OP807344 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
TaxID: 3016941
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-56
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2f93B00 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.82 | 59.0 | 6.19e-01 | 76.8% | 86.3% |
| 1iuqA01 | 1.10.1200.50 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › Glycerol-3-phosphate acyltransferase, alpha helical bundle, N-terminal | 0.79 | 57.0 | 5.12e-01 | 76.8% | 57.9% |
| 1z0pA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 47.0 | 4.33e-01 | 71.4% | 58.9% |
| 4gzrC00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.69 | 49.0 | 4.82e-01 | 76.8% | 73.8% |
| 1dt9A01 | 3.30.960.10 | Alpha Beta › 2-Layer Sandwich › Translation, Eukaryotic Peptide Chain Release Factor Subunit 1; Chain A › eRF1 domain 1 | 0.68 | 48.0 | 3.90e-01 | 75.0% | 69.5% |
| 1a36A04 | 1.10.132.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.67 | 47.0 | 3.35e-01 | 75.0% | 28.6% |
| 2rdcA00 | 1.10.287.800 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 | 0.66 | 56.0 | 4.25e-01 | 94.6% | 54.9% |
| 1n69B00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.66 | 46.0 | 4.16e-01 | 75.0% | 55.0% |
| 1x0tA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 51.0 | 4.99e-01 | 83.9% | 83.6% |
| 1lwbA00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.65 | 47.0 | 3.78e-01 | 80.4% | 37.7% |
| 3kztA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 51.0 | 3.96e-01 | 89.3% | 87.1% |
| 4fzlA01 | 1.10.150.790 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.64 | 49.0 | 4.28e-01 | 87.5% | 54.0% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.64 | 44.0 | 3.61e-01 | 73.2% | 37.6% |
| 4nb5B02 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.64 | 46.0 | 4.42e-01 | 76.8% | 76.6% |
| 2i7uA00 | 6.10.250.1010 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 45.0 | 4.41e-01 | 76.8% | 98.4% |
| 1grjA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.63 | 45.0 | 4.15e-01 | 76.8% | 63.5% |
| 2jbyA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.63 | 46.0 | 3.58e-01 | 80.4% | 62.2% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.62 | 46.0 | 3.72e-01 | 82.1% | 41.7% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 43.0 | 4.02e-01 | 73.2% | 97.2% |
| 7tzoA01 | 1.10.1070.11 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain | 0.60 | 45.0 | 3.36e-01 | 89.3% | 29.9% |
| 2gtsA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.58 | 45.0 | 4.08e-01 | 82.1% | 64.9% |
| 3vkgA14 | 6.10.140.1060 | Special › Helix non-globular › Helix Hairpins › | 0.58 | 43.0 | 3.93e-01 | 82.1% | 60.0% |
| 2ntxA01 | 1.20.58.2010 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › PRONE domain, subdomain 1 | 0.54 | 44.0 | 3.12e-01 | 98.2% | 87.1% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3940500 | 3198.1.1.0 ↗ | alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit | 0.78 | 51.0 | 4.31e-01 | 71.4% | 40.4% |
| 4466193 | 397.7.1.1 ↗ | few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › Vicilin_N | 0.77 | 52.0 | 5.91e-01 | 78.6% | 100.0% |
| 3344802 | 6158.1.1.0 ↗ | alpha bundles › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region › Nucleoporin p58/p45 helical region | 0.74 | 52.0 | 5.01e-01 | 75.0% | 95.4% |
| 3774829 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.72 | 50.0 | 3.24e-01 | 73.2% | 17.1% |
| 3876450 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.70 | 49.0 | 4.20e-01 | 75.0% | 45.6% |
| 3181201 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.70 | 56.0 | 3.76e-01 | 91.1% | 34.8% |
| 4685 | 192.16.1.1 ↗ | alpha bundles › Long alpha-hairpin › SPy1572-like › SPy1572-like › DUF1912 | 0.69 | 47.0 | 4.33e-01 | 71.4% | 58.9% |
| 3396076 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.69 | 47.0 | 4.38e-01 | 73.2% | 64.0% |
| 3568854 | 198.1.1.2 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2,SapB_1 | 0.66 | 44.0 | 4.11e-01 | 71.4% | 64.0% |
| 4030899 | 304.1.1.1 ↗ | a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C | 0.66 | 50.0 | 3.74e-01 | 82.1% | 33.8% |
| 3775067 | 198.1.1.21 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapA, SapB_2 | 0.66 | 46.0 | 3.65e-01 | 75.0% | 35.0% |
| 3552352 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.65 | 45.0 | 3.97e-01 | 73.2% | 48.2% |
| 3681259 | 5058.1.1.57 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › V-SNARE | 0.65 | 49.0 | 4.34e-01 | 80.4% | 54.1% |
| 4652719 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.64 | 48.0 | 4.05e-01 | 80.4% | 63.2% |
| 3663959 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.64 | 53.0 | 4.12e-01 | 94.6% | 74.6% |
| 4398992 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.63 | 55.0 | 3.36e-01 | 98.2% | 45.0% |
| 3846955 | 198.1.1.10 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2, SapB_1, Saposin | 0.60 | 42.0 | 3.86e-01 | 76.8% | 55.0% |
| 4051951 | 605.2.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 | 0.60 | 46.0 | 3.95e-01 | 82.1% | 62.2% |
| 4677656 | 198.1.1.8 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapA+SapB_2+SapB_1 | 0.59 | 48.0 | 3.82e-01 | 87.5% | 59.1% |
| 315449 | 192.8.1.2 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Hanta_nucleocap | 0.59 | 41.0 | 3.72e-01 | 71.4% | 52.6% |