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OP819284.1__WBF78382.1__X__00193

Bact-Vir

OP819284.1__WBF78382.1__X__00193

Identity

Accession:
OP819284 ↗
Kingdom:
phage

Quality

89.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 38-136
PDB
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2hqsA01 3.40.50.10070 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain 0.66 45.0 3.98e-01 70.7% 48.6%
3b7kB01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.60 40.0 3.54e-01 97.0% 47.9%
2knrA00 3.40.1530.20 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) 0.59 46.0 4.40e-01 100.0% 70.3%
6oziB00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.59 52.0 3.97e-01 100.0% 86.3%
4nspA00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.59 52.0 3.97e-01 100.0% 84.9%
2w42B02 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 52.0 3.94e-01 100.0% 97.0%
8in8C01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.57 50.0 3.76e-01 100.0% 92.4%
4kreA04 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 50.0 3.74e-01 100.0% 96.5%
8b0qA01 3.30.420.340 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › UvrC, RNAse H endonuclease domain 0.56 49.0 4.11e-01 98.0% 90.3%
1hq0A00 3.60.100.10 Alpha Beta › 4-Layer Sandwich › Cytotoxic necrotizing factor 1 (CNF1) › Cytotoxic necrotizing factor, Rho-activating domain 0.55 45.0 3.31e-01 91.9% 38.3%
1c9rA04 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.55 45.0 4.43e-01 88.9% 92.5%
4fkeA01 2.60.40.1730 Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain 0.55 48.0 3.69e-01 94.9% 80.9%
3vrdB03 3.90.760.10 Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain 0.55 36.0 4.10e-01 85.9% 89.2%
2w35A00 3.30.2170.10 Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily 0.55 48.0 3.76e-01 99.0% 83.4%
4ojdH01 2.60.98.60 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 0.55 42.0 3.64e-01 83.8% 74.4%
7kx7A03 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 47.0 3.71e-01 98.0% 98.1%
2dd7A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.52 40.0 3.16e-01 81.8% 49.1%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 36.0 3.25e-01 74.7% 49.3%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 35.0 2.45e-01 70.7% 28.4%
1lqvB00 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.52 44.0 3.63e-01 91.9% 64.7%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.52 40.0 2.71e-01 82.8% 64.8%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 32.0 3.01e-01 100.0% 48.4%
1mu5A01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.51 42.0 3.34e-01 90.9% 74.8%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 34.0 2.42e-01 71.7% 20.4%
1ffvB04 3.30.365.10 Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.51 39.0 3.20e-01 84.8% 77.3%
3tekA00 3.30.470.50 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › 0.50 39.0 3.53e-01 82.8% 92.1%
2q2eB01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.50 41.0 3.22e-01 89.9% 69.7%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3517477 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.68 50.0 4.91e-01 89.9% 72.4%
3223921 2484.1.1.259 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF26742 0.67 49.0 5.16e-01 86.9% 85.6%
3996952 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 49.0 3.49e-01 89.9% 27.1%
3351473 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.66 48.0 5.24e-01 89.9% 93.8%
3456693 2484.1.1.215 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.65 47.0 4.75e-01 88.9% 75.8%
3337433 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.65 46.0 5.09e-01 88.9% 91.3%
3516180 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.65 48.0 4.74e-01 89.9% 74.0%
3923261 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.64 48.0 4.48e-01 89.9% 64.2%
3676186 2484.1.1.106 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.64 44.0 4.66e-01 86.9% 81.2%
3830643 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.63 45.0 4.69e-01 88.9% 82.2%
3919833 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.62 55.0 3.81e-01 100.0% 91.2%
3928228 2484.1.1.43 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 0.62 55.0 4.15e-01 99.0% 85.8%
3305127 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.61 49.0 4.59e-01 85.9% 84.2%
3672945 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 49.0 3.76e-01 87.9% 45.5%
3427803 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 49.0 3.41e-01 87.9% 32.1%
3658408 4325.1.1.13 mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF4371 0.61 41.0 4.56e-01 74.7% 90.7%
3347628 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 49.0 3.65e-01 87.9% 42.4%
3671250 2484.1.1.215 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.61 49.0 4.39e-01 88.9% 73.8%
3661619 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.60 48.0 3.78e-01 87.9% 49.3%
3927366 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.60 49.0 4.27e-01 87.9% 88.7%
3427901 2484.1.1.215 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27041 0.60 50.0 3.88e-01 90.9% 52.4%
3679012 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 49.0 3.56e-01 87.9% 38.4%
3301697 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.60 53.0 3.51e-01 100.0% 95.6%
3457175 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 48.0 3.63e-01 88.9% 41.9%
None 0.60 48.0 4.30e-01 87.9% 75.9%
3664107 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.60 52.0 3.11e-01 100.0% 49.5%
3676745 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.60 48.0 4.34e-01 87.9% 76.4%
3571382 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.60 53.0 3.39e-01 100.0% 79.2%
4116396 2484.1.1.55 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom 0.60 54.0 4.17e-01 100.0% 70.3%
3924083 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.60 48.0 4.06e-01 87.9% 61.8%
3374455 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 49.0 3.53e-01 90.9% 55.0%
3940677 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.60 41.0 3.33e-01 90.9% 36.4%
3508989 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.60 48.0 4.16e-01 87.9% 67.1%
None 0.60 49.0 3.30e-01 90.9% 41.2%
3531937 2484.1.1.317 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF28925 0.59 53.0 3.37e-01 100.0% 78.8%
3651732 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.59 48.0 3.60e-01 90.9% 60.0%
3712567 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 45.0 3.65e-01 89.9% 43.2%
3527214 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.59 52.0 3.38e-01 100.0% 77.9%
3562870 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.59 52.0 3.36e-01 100.0% 80.2%
3645698 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.59 49.0 4.03e-01 90.9% 82.8%
3780866 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.59 52.0 3.33e-01 100.0% 80.0%
3683658 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.59 49.0 3.33e-01 90.9% 45.0%
3663874 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.59 48.0 3.23e-01 90.9% 39.9%
3913349 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 51.0 3.41e-01 100.0% 87.2%
3526186 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.58 52.0 3.33e-01 100.0% 79.2%
3307229 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 52.0 3.34e-01 100.0% 85.7%
3841343 2484.1.1.239 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, PF27046, PF27073 0.58 51.0 3.31e-01 100.0% 80.0%
3504143 2484.1.1.230 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 0.58 51.0 4.37e-01 98.0% 92.5%
3507177 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.58 51.0 3.41e-01 100.0% 94.3%
3306744 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.58 51.0 3.26e-01 100.0% 83.8%
3566243 2484.1.1.239 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, PF27046, PF27073 0.58 51.0 3.29e-01 100.0% 79.2%
3413200 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 51.0 3.37e-01 100.0% 82.5%
3462608 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.58 51.0 3.25e-01 100.0% 83.6%
5030672 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 49.0 3.71e-01 98.0% 92.5%
4830163 2484.1.1.26 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Piwi 0.57 46.0 3.91e-01 88.9% 68.6%
3813290 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.57 51.0 3.41e-01 100.0% 92.7%
3301688 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 50.0 3.25e-01 100.0% 82.0%
3537025 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.57 51.0 3.17e-01 100.0% 77.9%
3890518 2484.1.1.239 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, PF27046, PF27073 0.57 50.0 3.21e-01 100.0% 80.2%
3916761 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.57 50.0 3.28e-01 100.0% 96.9%
3381332 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.57 50.0 3.35e-01 100.0% 82.8%
3826575 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.57 50.0 3.24e-01 100.0% 79.8%
4438077 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.56 49.0 3.32e-01 100.0% 97.8%
3928581 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.56 51.0 3.19e-01 100.0% 82.5%
3776862 2484.1.1.50 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT 0.56 50.0 3.22e-01 100.0% 88.3%
3681567 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 49.0 3.18e-01 100.0% 83.6%
3674460 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.56 50.0 3.86e-01 100.0% 48.4%
3444325 2484.1.1.106 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.56 44.0 3.64e-01 85.9% 51.9%
3505861 2484.1.1.204 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 0.56 48.0 3.51e-01 94.9% 62.3%
3566979 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.56 50.0 3.11e-01 100.0% 74.4%
3938447 2484.1.1.4 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H 0.56 48.0 4.11e-01 97.0% 86.7%
3326086 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.56 49.0 3.51e-01 100.0% 93.5%
3384667 2484.1.1.157 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 0.55 49.0 3.28e-01 100.0% 74.1%
219788 244.2.1.3 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FCSD-flav_bind 0.55 36.0 4.09e-01 86.9% 88.0%
4945556 11.1.5.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.54 47.0 3.75e-01 91.9% 80.0%
3811894 2484.1.1.198 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 0.54 49.0 3.22e-01 100.0% 68.5%
3920627 192.18.1.0 alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.53 47.0 3.05e-01 100.0% 84.0%
3364681 2484.1.1.165 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 46.0 3.12e-01 100.0% 89.5%
3300528 2484.1.1.165 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 46.0 3.08e-01 100.0% 92.8%
4345080 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.53 30.0 3.56e-01 79.8% 84.6%
3291496 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.53 44.0 3.32e-01 91.9% 49.8%
3412961 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 45.0 3.02e-01 100.0% 81.5%
3804501 2484.1.1.165 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 45.0 3.39e-01 99.0% 93.1%
4002282 2484.1.1.15 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › GDA1_CD39 0.52 45.0 3.68e-01 98.0% 69.5%
3366390 2484.1.1.106 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.51 44.0 4.17e-01 100.0% 78.3%
3679236 2484.1.1.106 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 0.50 46.0 3.00e-01 100.0% 96.2%