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OP820472.1__WAB10617.1__SEA_ECLIPTUS_52__00052
Bact-VirOP820472.1__WAB10617.1__SEA_ECLIPTUS_52__00052
Identity
- Accession:
- OP820472 ↗
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Cluster
View cluster (13 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-138
Domain cluster:
rep: MN428057.1__QFP97008.1__SEA_SUERTE_37__00037__D9-115
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fx3B00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.76 | 69.0 | 6.74e-01 | 97.1% | 91.3% |
| 3wa5B00 | 2.60.120.1690 | Mainly Beta › Sandwich › Jelly Rolls › | 0.67 | 43.0 | 4.49e-01 | 77.9% | 70.2% |
| 2hngA00 | 3.10.420.10 | Alpha Beta › Roll › Bacterial Protein-export protein SecB › SecB-like | 0.65 | 55.0 | 5.78e-01 | 91.2% | 100.0% |
| 8in8C01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.63 | 46.0 | 3.68e-01 | 75.0% | 87.0% |
| 4gn2A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.62 | 46.0 | 3.74e-01 | 75.7% | 100.0% |
| 2egjA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.62 | 37.0 | 3.88e-01 | 96.3% | 64.3% |
| 4k00A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 39.0 | 3.97e-01 | 95.6% | 64.2% |
| 5byuA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.61 | 36.0 | 3.71e-01 | 94.1% | 61.7% |
| 4iedA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.60 | 47.0 | 3.79e-01 | 80.9% | 94.6% |
| 1njkA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 41.0 | 4.17e-01 | 100.0% | 70.7% |
| 2hx5A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.59 | 41.0 | 4.03e-01 | 98.5% | 66.4% |
| 4ztkA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 43.0 | 3.39e-01 | 76.5% | 91.0% |
| 1nrfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 45.0 | 3.66e-01 | 80.9% | 92.7% |
| 2cyeC00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 36.0 | 3.65e-01 | 90.4% | 62.1% |
| 2gf6A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.58 | 38.0 | 3.86e-01 | 99.3% | 66.9% |
| 1e3uD00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 45.0 | 3.66e-01 | 80.9% | 94.2% |
| 1lo7A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.56 | 38.0 | 3.80e-01 | 100.0% | 66.4% |
| 4jhyA00 | 3.30.530.80 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.56 | 36.0 | 3.49e-01 | 82.4% | 57.1% |
| 2nujA01 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.55 | 37.0 | 3.64e-01 | 99.3% | 61.5% |
| 4e1sA00 | 2.40.160.160 | Mainly Beta › Beta Barrel › Porin › Inverse autotransporter, beta-domain | 0.55 | 43.0 | 3.59e-01 | 83.1% | 99.6% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.54 | 40.0 | 4.02e-01 | 77.2% | 81.0% |
| 2wuqB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 42.0 | 3.29e-01 | 80.9% | 95.1% |
| 4e6fA00 | 3.30.530.80 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › | 0.52 | 33.0 | 3.10e-01 | 82.4% | 50.3% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.52 | 38.0 | 3.69e-01 | 75.0% | 87.2% |
| 1xkzC00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 42.0 | 3.36e-01 | 84.6% | 92.3% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991968 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.80 | 61.0 | 6.80e-01 | 84.6% | 98.2% |
| 4954298 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.79 | 54.0 | 6.39e-01 | 78.7% | 100.0% |
| 3604380 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.79 | 72.0 | 7.06e-01 | 96.3% | 93.1% |
| 4540264 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.79 | 71.0 | 6.85e-01 | 95.6% | 100.0% |
| 4037556 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.78 | 70.0 | 6.95e-01 | 94.9% | 95.0% |
| 4942348 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.78 | 62.0 | 6.52e-01 | 83.8% | 100.0% |
| 4644143 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.78 | 69.0 | 7.07e-01 | 100.0% | 98.5% |
| 5027896 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.77 | 61.0 | 6.36e-01 | 82.4% | 100.0% |
| 5054725 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.75 | 61.0 | 6.49e-01 | 85.3% | 99.2% |
| 5030898 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.75 | 63.0 | 6.67e-01 | 87.5% | 100.0% |
| 4318546 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.74 | 67.0 | 6.73e-01 | 97.1% | 100.0% |
| 1883638 | 504.1.1.1 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › SecB | 0.73 | 62.0 | 5.97e-01 | 91.9% | 81.9% |
| 3602292 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.72 | 49.0 | 5.70e-01 | 77.9% | 98.9% |
| 4932446 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.71 | 57.0 | 6.03e-01 | 84.6% | 100.0% |
| 4981385 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.71 | 57.0 | 6.08e-01 | 86.0% | 100.0% |
| 5001466 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.69 | 52.0 | 3.79e-01 | 77.2% | 71.6% |
| 4940126 | 504.1.1.0 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB | 0.68 | 55.0 | 5.85e-01 | 86.0% | 98.3% |
| 3744550 | 223.2.1.48 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › FNIP_N, Longin_2 | 0.68 | 52.0 | 4.88e-01 | 79.4% | 81.8% |
| 4972572 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.68 | 50.0 | 3.67e-01 | 75.7% | 82.5% |
| 4978131 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.68 | 50.0 | 3.90e-01 | 75.7% | 92.7% |
| 4936010 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.67 | 50.0 | 3.68e-01 | 76.5% | 90.0% |
| 5032376 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.67 | 49.0 | 3.82e-01 | 75.7% | 78.9% |
| 5796 | 504.1.1.2 ↗ | a+b two layers › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › Bacterial protein-export protein SecB › DUF1149 | 0.66 | 55.0 | 5.77e-01 | 89.0% | 100.0% |
| 3290484 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.65 | 50.0 | 4.56e-01 | 79.4% | 67.4% |
| 4989872 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.65 | 47.0 | 3.34e-01 | 75.0% | 90.6% |
| 3286469 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.64 | 49.0 | 4.49e-01 | 79.4% | 68.0% |
| 5073316 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 48.0 | 3.57e-01 | 77.9% | 87.4% |
| 4956937 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.63 | 46.0 | 3.42e-01 | 75.7% | 85.6% |
| 4966376 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.63 | 47.0 | 3.50e-01 | 77.2% | 88.2% |
| 4931020 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.63 | 46.0 | 3.41e-01 | 75.7% | 79.1% |
| 4985492 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.63 | 46.0 | 3.70e-01 | 77.2% | 92.2% |
| 5083090 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 46.0 | 3.49e-01 | 76.5% | 84.1% |
| 5069722 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.62 | 46.0 | 3.45e-01 | 75.7% | 84.2% |
| 4927205 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.62 | 46.0 | 3.60e-01 | 76.5% | 78.6% |
| 3641705 | 222.1.1.0 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase | 0.60 | 39.0 | 4.35e-01 | 98.5% | 83.8% |
| 4342757 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.60 | 37.0 | 3.53e-01 | 70.6% | 51.2% |
| 3285470 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.60 | 41.0 | 3.70e-01 | 92.6% | 50.0% |
| 4344452 | 223.3.1.3 ↗ | a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase | 0.60 | 45.0 | 3.67e-01 | 77.9% | 99.2% |
| 3514135 | 5084.1.1.19 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › BCSC_C | 0.60 | 44.0 | 4.10e-01 | 75.7% | 100.0% |
| 5062002 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.59 | 43.0 | 3.38e-01 | 75.7% | 86.2% |
| 4016925 | 2484.1.1.16 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_HII | 0.59 | 50.0 | 3.86e-01 | 91.2% | 62.0% |
| 5030672 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 43.0 | 3.46e-01 | 76.5% | 90.6% |
| 5037096 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 43.0 | 3.64e-01 | 76.5% | 85.5% |
| 3789272 | 222.1.1.20 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MFE-2_hydrat-2_N | 0.58 | 35.0 | 3.46e-01 | 97.1% | 54.0% |
| 3278990 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.58 | 44.0 | 4.20e-01 | 80.1% | 68.4% |
| 4947601 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.57 | 42.0 | 3.26e-01 | 77.2% | 83.0% |
| 3280926 | 881.1.1.6 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN | 0.54 | 43.0 | 3.95e-01 | 83.1% | 70.1% |
| 3283651 | 222.1.1.9 ↗ | a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › MaoC_dehydrat_N | 0.54 | 38.0 | 3.98e-01 | 96.3% | 79.2% |
| 386453 | 881.1.1.6 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN | 0.53 | 42.0 | 3.95e-01 | 81.6% | 73.1% |
| 4059480 | 881.1.1.37 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27270 | 0.52 | 39.0 | 3.66e-01 | 80.1% | 71.4% |
| 2516709 | 881.1.1.6 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › Lpp-LpqN | 0.52 | 41.0 | 3.75e-01 | 82.4% | 68.2% |
| 5062048 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.51 | 37.0 | 3.73e-01 | 74.3% | 86.4% |
| 4031371 | 264.2.1.1 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac | 0.51 | 37.0 | 3.67e-01 | 73.5% | 80.7% |