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OP820700.1__WBF79347.1__IACHDJAJ_00137__00108
Bact-VirOP820700.1__WBF79347.1__IACHDJAJ_00137__00108
Identity
- Accession:
- OP820700 ↗
- Kingdom:
- phage
Quality
83.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Demerecviridae›
Shenzhenvirus›
Aeromonas_phage_vB_AdhS_TS3
TaxID: 3003744
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-36
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jj2Y00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.80 | 60.0 | 4.82e-01 | 83.3% | 41.1% |
| 1vwxp00 | 2.20.25.30 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.77 | 60.0 | 4.56e-01 | 91.7% | 39.6% |
| 3u50C02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.76 | 55.0 | 5.64e-01 | 83.3% | 82.9% |
| 4esjA01 | 3.40.210.30 | Alpha Beta › 3-Layer(aba) Sandwich › PvuII Endonuclease; Chain A › Dam replacing family, catalytic PD-(D/E)XK domain | 0.75 | 65.0 | 4.25e-01 | 100.0% | 30.8% |
| 2gb5A01 | 3.90.79.20 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › | 0.75 | 57.0 | 3.93e-01 | 88.9% | 24.8% |
| 1nuiA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.70 | 52.0 | 5.08e-01 | 88.9% | 74.4% |
| 1l1oC02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.69 | 50.0 | 5.01e-01 | 86.1% | 84.2% |
| 2xzm901 | 6.20.50.180 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.69 | 55.0 | 4.54e-01 | 97.2% | 48.6% |
| 2aklA01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.67 | 55.0 | 5.30e-01 | 100.0% | 88.4% |
| 1m2vB03 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.66 | 51.0 | 4.38e-01 | 88.9% | 58.1% |
| 3k8rA01 | 3.30.2020.40 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 | 0.66 | 51.0 | 4.41e-01 | 97.2% | 94.1% |
| 6efaA02 | 3.10.20.890 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.65 | 53.0 | 4.27e-01 | 97.2% | 61.5% |
| 2nutB02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.65 | 51.0 | 4.35e-01 | 88.9% | 56.5% |
| 4gnxC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 47.0 | 3.09e-01 | 86.1% | 17.5% |
| 2poiA00 | 1.10.1170.10 | Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A | 0.62 | 43.0 | 3.52e-01 | 91.7% | 35.9% |
| 1fjrA02 | 2.170.180.11 | Mainly Beta › Beta Complex › Methuselah ectodomain, domain 2 › Methuselah ectodomain, domain 2 | 0.61 | 48.0 | 3.38e-01 | 94.4% | 74.4% |
| 4g09A03 | 1.20.5.1300 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.60 | 41.0 | 3.70e-01 | 75.0% | 98.2% |
| 1pg5B02 | 2.30.30.20 | Mainly Beta › Roll › SH3 type barrels. › Aspartate carbamoyltransferase regulatory subunit, C-terminal domain | 0.59 | 43.0 | 4.01e-01 | 94.4% | 87.7% |
| 6ukcA00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.58 | 40.0 | 2.82e-01 | 72.2% | 23.3% |
| 1zbtA02 | 3.30.70.1660 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 2.94e-01 | 88.9% | 65.6% |
| 3bfmA02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 43.0 | 4.21e-01 | 97.2% | 100.0% |
| 2nqlA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 41.0 | 2.83e-01 | 100.0% | 19.0% |
| 1i3oF00 | 1.10.1170.10 | Mainly Alpha › Orthogonal Bundle › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A › Inhibitor Of Apoptosis Protein (2mihbC-IAP-1); Chain A | 0.56 | 42.0 | 3.25e-01 | 91.7% | 34.4% |
| 2nutA02 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.56 | 40.0 | 3.61e-01 | 86.1% | 60.7% |
| 5dcmB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 2.86e-01 | 86.1% | 21.4% |
| 2qy6A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 38.0 | 2.41e-01 | 72.2% | 11.9% |
| 1odmA00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.53 | 41.0 | 2.47e-01 | 97.2% | 65.3% |
| 4ap5A01 | 3.40.50.11340 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 35.0 | 2.28e-01 | 77.8% | 26.5% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945128 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 66.0 | 6.72e-01 | 86.1% | 88.6% |
| 4943013 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.82 | 63.0 | 4.66e-01 | 83.3% | 33.3% |
| 5049039 | 207.1.1.95 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_14 | 0.82 | 61.0 | 3.44e-01 | 86.1% | 7.6% |
| 2642976 | 375.1.1.206 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae, Zn_ribbon_IS1595 | 0.81 | 62.0 | 4.70e-01 | 83.3% | 35.7% |
| 5042912 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.81 | 62.0 | 4.76e-01 | 83.3% | 37.5% |
| 4991162 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.81 | 63.0 | 3.83e-01 | 88.9% | 14.4% |
| 4977601 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.80 | 63.0 | 4.72e-01 | 88.9% | 41.1% |
| 5075189 | 2484.1.1.302 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Cas12f1-like_TNB | 0.79 | 61.0 | 3.80e-01 | 88.9% | 15.1% |
| 4943268 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 62.0 | 4.71e-01 | 88.9% | 41.2% |
| 3589899 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.77 | 58.0 | 5.48e-01 | 83.3% | 66.7% |
| 5075345 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.77 | 57.0 | 5.21e-01 | 83.3% | 60.0% |
| 4932429 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.77 | 61.0 | 5.10e-01 | 88.9% | 52.4% |
| 4255854 | 4294.1.1.8 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › PF27112 | 0.77 | 64.0 | 5.75e-01 | 94.4% | 68.0% |
| 5028391 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.77 | 58.0 | 4.33e-01 | 83.3% | 32.3% |
| 3506351 | 375.1.1.44 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-NADH-PPase | 0.77 | 62.0 | 6.34e-01 | 97.2% | 97.1% |
| 3992738 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.76 | 62.0 | 5.83e-01 | 97.2% | 75.6% |
| 1442764 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.76 | 62.0 | 4.46e-01 | 91.7% | 35.3% |
| 1949611 | 375.1.1.13 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L37ae | 0.76 | 60.0 | 4.54e-01 | 91.7% | 39.6% |
| 5043002 | 375.1.1.37 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TF_Zn_Ribbon | 0.75 | 61.0 | 5.77e-01 | 94.4% | 75.6% |
| 2455434 | 375.1.1.39 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Prim_Zn_Ribbon | 0.75 | 55.0 | 5.60e-01 | 83.3% | 85.7% |
| 4948064 | 375.10.1.6 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha › Zn_Ribbon_TF | 0.75 | 59.0 | 5.33e-01 | 88.9% | 64.0% |
| 5055298 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 56.0 | 4.91e-01 | 88.9% | 56.7% |
| 4122844 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.73 | 57.0 | 5.61e-01 | 88.9% | 80.0% |
| 5025770 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.73 | 60.0 | 5.45e-01 | 94.4% | 68.0% |
| 2061904 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.71 | 57.0 | 3.78e-01 | 97.2% | 21.0% |
| 4187442 | 375.1.1.76 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-RRN7 | 0.70 | 56.0 | 5.69e-01 | 88.9% | 91.4% |
| 3436005 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 54.0 | 4.56e-01 | 91.7% | 50.8% |
| 4993774 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 55.0 | 5.27e-01 | 97.2% | 84.4% |
| 4263366 | 2004.1.1.219 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PriA_CRR | 0.69 | 53.0 | 3.26e-01 | 88.9% | 15.5% |
| 4969991 | 375.1.1.213 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_TiaS | 0.69 | 50.0 | 4.81e-01 | 88.9% | 68.9% |
| 4473885 | 2.1.1.287 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Zn_ribbon_TiaS | 0.68 | 51.0 | 3.24e-01 | 88.9% | 15.6% |
| 3980811 | 375.1.1.60 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PriA_CRR | 0.66 | 51.0 | 4.46e-01 | 91.7% | 66.7% |
| 2800346 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 51.0 | 4.92e-01 | 91.7% | 76.7% |
| 3688315 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.65 | 51.0 | 4.66e-01 | 88.9% | 80.0% |
| 5045429 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 50.0 | 3.73e-01 | 88.9% | 48.4% |
| 4963102 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.64 | 45.0 | 2.86e-01 | 77.8% | 15.2% |
| 3520763 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 48.0 | 4.02e-01 | 91.7% | 64.0% |
| 3994166 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.63 | 47.0 | 3.00e-01 | 83.3% | 40.0% |
| 3399001 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 45.0 | 3.72e-01 | 86.1% | 93.8% |
| 3584930 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.62 | 42.0 | 3.63e-01 | 86.1% | 40.0% |
| 3387450 | 2003.1.15.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Glycosyltransferase Maf N-terminal domain | 0.61 | 43.0 | 2.77e-01 | 72.2% | 15.4% |
| 3615962 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.61 | 41.0 | 4.04e-01 | 86.1% | 60.0% |
| 3264997 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 44.0 | 3.93e-01 | 86.1% | 49.1% |
| 3691998 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.61 | 41.0 | 3.55e-01 | 88.9% | 40.0% |
| 3341478 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 43.0 | 4.19e-01 | 86.1% | 67.5% |
| 8046 | 375.1.4.1 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain › PyrI_C | 0.60 | 43.0 | 4.02e-01 | 91.7% | 83.9% |
| 3485364 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 43.0 | 3.90e-01 | 77.8% | 56.0% |
| 193502 | 218.1.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N | 0.57 | 41.0 | 2.90e-01 | 100.0% | 21.2% |
| 3778945 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 43.0 | 3.16e-01 | 83.3% | 22.9% |
| 3312039 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 39.0 | 3.60e-01 | 80.6% | 50.9% |
| 3707297 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.56 | 39.0 | 3.60e-01 | 88.9% | 52.7% |
| 3805317 | 376.1.3.70 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › C1_2 | 0.56 | 42.0 | 3.73e-01 | 91.7% | 88.3% |
| 4927454 | 386.1.1.418 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-FPG_IleRS | 0.55 | 39.0 | 3.84e-01 | 83.3% | 88.9% |
| 3807699 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.55 | 42.0 | 3.69e-01 | 88.9% | 86.7% |
| 3583925 | 376.1.2.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 | 0.54 | 38.0 | 2.91e-01 | 77.8% | 38.9% |
| 3805084 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.54 | 39.0 | 3.38e-01 | 100.0% | 68.8% |
| 4887310 | 4958.1.1.2 ↗ | a+b complex topology › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › second helical domain in RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_4 | 0.52 | 36.0 | 2.35e-01 | 75.0% | 13.3% |
| 5010276 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.52 | 41.0 | 2.93e-01 | 86.1% | 70.0% |
| 4930798 | 4266.1.1.0 ↗ | alpha bundles › Hyaluronidase domain-like › Hyaluronidase post-catalytic domain-like › Hyaluronidase post-catalytic domain-like | 0.52 | 38.0 | 2.48e-01 | 72.2% | 55.4% |
| 3903603 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 37.0 | 3.08e-01 | 88.9% | 38.7% |
| 4886908 | 4167.1.1.1 ↗ | beta complex topology › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › LlgE_F_G_D1 | 0.50 | 36.0 | 3.27e-01 | 86.1% | 76.2% |
| 3737200 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.50 | 41.0 | 3.54e-01 | 97.2% | 98.3% |