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OP830906.1__WBF78058.1__MEP401_gp05__00005
Bact-VirOP830906.1__WBF78058.1__MEP401_gp05__00005
Identity
- Accession:
- OP830906 ↗
- Kingdom:
- phage
Quality
91.7
mean pLDDT
Taxonomy
TaxID: 3003800
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-128
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ub1A01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 32.0 | 3.16e-01 | 85.4% | 56.6% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3785806 | 5.1.2.20 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BMT | 0.51 | 43.0 | 2.83e-01 | 90.2% | 46.5% |
| 4965901 | 331.2.1.15 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF7845 | 0.50 | 46.0 | 4.07e-01 | 100.0% | 83.4% |
| 3613595 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 40.0 | 2.88e-01 | 83.7% | 80.6% |
D2
medium
residues 168-286
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ng5B00 | 2.40.260.10 | Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase | 0.54 | 40.0 | 3.48e-01 | 80.7% | 83.0% |
D3
medium
residues 296-546
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r8gA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.74 | 64.0 | 5.63e-01 | 90.0% | 90.1% |
| 1itpA00 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.65 | 23.0 | 4.02e-01 | 75.3% | 100.0% |
| 2cqiA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 26.0 | 3.84e-01 | 79.3% | 90.3% |
| 2jx2A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 24.0 | 3.88e-01 | 85.3% | 100.0% |
| 4qu7A00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 23.0 | 3.77e-01 | 70.1% | 100.0% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 25.0 | 3.70e-01 | 76.9% | 97.0% |
| 7ewsB02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.55 | 41.0 | 4.13e-01 | 76.1% | 97.6% |
| 3pjxA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.53 | 35.0 | 4.11e-01 | 80.5% | 91.7% |
| 1ykwA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.53 | 29.0 | 3.83e-01 | 81.7% | 99.2% |
| 2f06A00 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.51 | 29.0 | 3.57e-01 | 74.1% | 90.3% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4018912 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.82 | 71.0 | 6.45e-01 | 88.8% | 100.0% |
| 4014087 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.82 | 71.0 | 6.36e-01 | 89.2% | 92.8% |
| 3187412 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.82 | 71.0 | 6.29e-01 | 89.2% | 100.0% |
| 3723519 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.81 | 70.0 | 6.07e-01 | 90.0% | 97.3% |
| 3695411 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.80 | 70.0 | 6.10e-01 | 90.0% | 98.6% |
| 3735130 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.80 | 69.0 | 5.61e-01 | 90.0% | 98.2% |
| 3194430 | 321.1.1.10 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Amidoligase_2 | 0.79 | 68.0 | 6.01e-01 | 90.4% | 100.0% |
| 4971846 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.76 | 66.0 | 5.72e-01 | 89.6% | 96.4% |
| 5000177 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.76 | 65.0 | 5.76e-01 | 89.6% | 91.8% |
| 4090827 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.73 | 63.0 | 5.44e-01 | 89.2% | 89.7% |
| 4392194 | 321.1.1.7 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › GCS2 | 0.73 | 63.0 | 5.34e-01 | 89.6% | 85.4% |
| 3685180 | 321.1.1.0 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase | 0.73 | 63.0 | 5.38e-01 | 90.0% | 97.4% |
| 4412642 | 321.1.1.6 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Pup_ligase | 0.70 | 60.0 | 5.03e-01 | 90.4% | 80.5% |
| 184476 | 304.9.1.32 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Ret2_MD | 0.56 | 23.0 | 3.55e-01 | 75.3% | 96.8% |