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OP830906.1__WBF78083.1__MEP401_gp30__00030

Bact-Vir

OP830906.1__WBF78083.1__MEP401_gp30__00030

Identity

Accession:
OP830906 ↗
Kingdom:
phage

Quality

87.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Zobellviridae› Methylophilales_phage_MEP401

TaxID: 3003800

Cluster

View cluster (3 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 43-193
PDB
Domain cluster: rep: NC_073481.1__YP_010756090.1__QEJ66_gp08__00008__D21-190
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF18013.7 best Phage_lysozyme2 72.9 4.30e-20 96.7% 97.8%
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ct5A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.83 79.0 7.78e-01 100.0% 99.4%
2dqaA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.66 50.0 5.52e-01 91.4% 97.6%
6ukcA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.65 53.0 5.58e-01 99.3% 98.5%
3bkhA02 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.64 57.0 5.38e-01 96.7% 98.4%
2xqoA00 1.10.530.60 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.63 58.0 5.18e-01 100.0% 80.5%
4yf2A00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.63 51.0 5.47e-01 100.0% 99.2%
4hjzA00 1.10.530.10 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.62 55.0 5.18e-01 96.7% 92.9%
7f0uA01 1.10.8.1190 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Papain-like viral protease, thumb domain 0.59 32.0 3.90e-01 87.4% 82.1%
1f0lA02 1.10.490.40 Mainly Alpha › Orthogonal Bundle › Globin-like › Diphtheria toxin, translocation domain 0.58 34.0 3.25e-01 74.2% 48.6%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.51 42.0 3.80e-01 88.1% 81.1%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1253692 235.1.1.23 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme2 0.83 79.0 7.74e-01 100.0% 97.5%
3289790 235.1.1.23 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Phage_lysozyme2 0.81 77.0 7.63e-01 98.7% 99.4%
3284481 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.75 64.0 6.65e-01 100.0% 95.7%
3202405 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.71 66.0 6.13e-01 99.3% 89.7%
3940805 524.1.1.1 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC 0.67 44.0 4.66e-01 84.8% 74.1%
3838879 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.66 59.0 5.98e-01 100.0% 96.6%
3985073 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.66 54.0 5.65e-01 95.4% 95.6%
4282584 235.1.1.0 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like 0.66 62.0 5.73e-01 100.0% 86.5%
3266337 524.1.1.1 ↗ alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC 0.65 43.0 4.64e-01 84.8% 77.7%
52232 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.63 33.0 4.37e-01 88.1% 98.7%
1125597 235.1.1.8 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › Glyco_hydro_46 0.62 52.0 4.41e-01 90.1% 94.8%
3720811 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.56 31.0 3.89e-01 85.4% 90.0%
3347336 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.53 29.0 3.50e-01 86.8% 82.1%
4970900 632.7.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain 0.52 30.0 3.75e-01 74.2% 95.6%
4991378 601.7.1.3 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › PaREP1 0.51 33.0 3.52e-01 73.5% 76.0%