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OP867025.1__WAA20136.1__SEA_CLARKSON_32__00032
Bact-VirOP867025.1__WAA20136.1__SEA_CLARKSON_32__00032
Identity
- Accession:
- OP867025 ↗
- Kingdom:
- phage
Quality
90.9
mean pLDDT
Taxonomy
TaxID: 2998891
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 3-72
Domain cluster:
rep: MF537628.1__ASR77102.1__SEA_BONANZA_51__00048__D8-65
D2
medium
residues 84-114
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ph1A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 50.0 | 2.89e-01 | 96.8% | 8.1% |
| 5niiB01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.75 | 61.0 | 3.75e-01 | 96.8% | 18.2% |
| 1hyuA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 56.0 | 3.55e-01 | 96.8% | 16.5% |
| 5veoA01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.71 | 54.0 | 3.14e-01 | 83.9% | 68.1% |
| 1wimA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.71 | 54.0 | 4.04e-01 | 100.0% | 31.9% |
| 1zowA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.70 | 49.0 | 3.18e-01 | 100.0% | 16.5% |
| 8d3mA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.70 | 53.0 | 3.09e-01 | 87.1% | 10.4% |
| 4fk1A01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.69 | 58.0 | 3.63e-01 | 100.0% | 94.7% |
| 3spdA00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.65 | 52.0 | 3.19e-01 | 90.3% | 32.5% |
| 3vkhB07 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 46.0 | 2.84e-01 | 80.6% | 13.8% |
| 2yzsA02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.63 | 54.0 | 3.29e-01 | 100.0% | 15.4% |
| 2kqrA01 | 3.30.1910.20 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › asparaginyl-tRNA synthetase, N-terminal domain | 0.63 | 47.0 | 3.66e-01 | 87.1% | 50.0% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.63 | 48.0 | 2.93e-01 | 100.0% | 21.3% |
| 4zohA05 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.60 | 41.0 | 2.90e-01 | 90.3% | 19.2% |
| 4q28A00 | 3.30.160.780 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.60 | 42.0 | 3.02e-01 | 77.4% | 29.1% |
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.59 | 41.0 | 4.06e-01 | 74.2% | 64.7% |
| 1iq8A03 | 3.10.450.90 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain | 0.58 | 42.0 | 3.22e-01 | 93.5% | 25.7% |
| 2xocA01 | 3.30.40.140 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.57 | 42.0 | 3.23e-01 | 83.9% | 70.5% |
| 2lxwA00 | 6.10.250.1730 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.56 | 49.0 | 4.07e-01 | 100.0% | 58.2% |
| 3hcsA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.55 | 39.0 | 3.37e-01 | 74.2% | 50.0% |
| 3a44C02 | 4.10.80.120 | Few Secondary Structures › Irregular › Rhinovirus 14, subunit 4 › | 0.51 | 35.0 | 3.53e-01 | 74.2% | 100.0% |
ECOD (39)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4020727 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.92 | 80.0 | 5.20e-01 | 100.0% | 24.8% |
| 3214541 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.83 | 55.0 | 3.08e-01 | 87.1% | 6.7% |
| 3228766 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.81 | 54.0 | 3.02e-01 | 83.9% | 6.4% |
| 4537295 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 56.0 | 5.39e-01 | 74.2% | 65.7% |
| 3233807 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.79 | 60.0 | 4.85e-01 | 100.0% | 42.9% |
| 2322888 | 375.1.1.18 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › SIR2 | 0.78 | 54.0 | 5.31e-01 | 77.4% | 100.0% |
| 4002002 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 57.0 | 4.80e-01 | 87.1% | 45.0% |
| 3221467 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.77 | 56.0 | 3.15e-01 | 87.1% | 7.2% |
| 4944680 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 60.0 | 3.25e-01 | 96.8% | 4.3% |
| 3664655 | 601.28.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › VPS28 C-terminal domain-like › VPS28 C-terminal domain-like › PHD_Oberon | 0.74 | 59.0 | 3.87e-01 | 100.0% | 27.3% |
| 3928741 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.71 | 57.0 | 4.24e-01 | 96.8% | 34.1% |
| 3194224 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.71 | 60.0 | 4.70e-01 | 100.0% | 44.3% |
| 3273744 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.69 | 52.0 | 3.92e-01 | 100.0% | 31.6% |
| 4611940 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 47.0 | 4.76e-01 | 74.2% | 76.7% |
| 3495811 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.66 | 45.0 | 4.59e-01 | 74.2% | 70.0% |
| 3176105 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.66 | 49.0 | 2.84e-01 | 80.6% | 10.3% |
| 3838562 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.66 | 47.0 | 3.98e-01 | 83.9% | 43.6% |
| 4306889 | 375.1.1.241 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_ribbon_ACC | 0.65 | 46.0 | 4.56e-01 | 74.2% | 65.7% |
| 4541485 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.65 | 46.0 | 3.82e-01 | 71.0% | 34.5% |
| 3685378 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 44.0 | 3.73e-01 | 71.0% | 36.7% |
| 3210561 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 50.0 | 4.52e-01 | 100.0% | 82.0% |
| 3580468 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 43.0 | 4.41e-01 | 74.2% | 72.4% |
| 3257115 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 45.0 | 4.14e-01 | 87.1% | 55.1% |
| 3259913 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 53.0 | 4.12e-01 | 100.0% | 42.7% |
| 3993220 | 376.1.2.24 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › RH_dom | 0.63 | 46.0 | 3.99e-01 | 83.9% | 47.3% |
| 1916723 | 386.1.1.23 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_3 | 0.62 | 44.0 | 4.47e-01 | 77.4% | 96.8% |
| 3392271 | 386.1.1.26 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6 | 0.61 | 40.0 | 4.09e-01 | 71.0% | 60.0% |
| 3435151 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 42.0 | 4.11e-01 | 71.0% | 62.9% |
| 3260234 | 376.1.1.23 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_2 | 0.58 | 44.0 | 2.99e-01 | 83.9% | 20.0% |
| 8316 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.58 | 41.0 | 3.94e-01 | 71.0% | 59.5% |
| 3396499 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.57 | 40.0 | 4.12e-01 | 77.4% | 96.7% |
| 4494582 | 386.1.1.12 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Sgf11 | 0.57 | 39.0 | 3.52e-01 | 71.0% | 46.7% |
| 3860380 | 386.1.1.269 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › CCHC_BCL-11A | 0.55 | 41.0 | 4.16e-01 | 71.0% | 66.7% |
| 3485130 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 38.0 | 3.81e-01 | 71.0% | 60.0% |
| 3663614 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.54 | 38.0 | 3.53e-01 | 71.0% | 46.7% |
| 4004131 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 39.0 | 3.94e-01 | 71.0% | 66.7% |
| 4032632 | 7579.1.1.9 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Esterase | 0.53 | 45.0 | 2.73e-01 | 93.5% | 51.7% |
| 3643916 | 375.1.1.235 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › ADD_ATRX | 0.53 | 39.0 | 3.66e-01 | 83.9% | 67.5% |
| 3567633 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 38.0 | 3.90e-01 | 74.2% | 66.7% |