Back to structures

OP869855.1__WBF77523.1__X__00045

Bact-Vir

OP869855.1__WBF77523.1__X__00045

Identity

Accession:
OP869855 ↗
Kingdom:
phage

Quality

59.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-51
PDB
Domain cluster: representative
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2i45D00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.68 50.0 4.06e-01 92.2% 41.4%
6b9tF01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.66 49.0 3.74e-01 82.4% 52.0%
3p42A03 3.10.560.10 Alpha Beta › Roll › Outer membrane lipoprotein wza fold like › Outer membrane lipoprotein wza domain like 0.66 49.0 4.33e-01 80.4% 70.3%
4uzgA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 50.0 3.63e-01 86.3% 53.2%
3bcwA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.65 48.0 3.89e-01 86.3% 39.4%
1qr4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 50.0 4.33e-01 88.2% 73.6%
2dlgA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 53.0 4.66e-01 94.1% 75.0%
4jzjC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 50.0 4.10e-01 88.2% 72.1%
2yn5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 52.0 4.59e-01 94.1% 67.1%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 4.54e-01 86.3% 89.4%
1i9gA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.63 48.0 4.44e-01 82.4% 95.3%
3w42A00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.63 52.0 3.59e-01 98.0% 30.2%
1j3qB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 53.0 3.72e-01 100.0% 45.4%
1u3eM02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.63 49.0 4.45e-01 84.3% 82.4%
1ifrA00 2.60.40.1260 Mainly Beta › Sandwich › Immunoglobulin-like › Lamin Tail domain 0.63 50.0 4.01e-01 94.1% 77.0%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 45.0 4.39e-01 78.4% 100.0%
6vtmB00 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.62 48.0 4.04e-01 90.2% 69.8%
2gy5A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 49.0 4.00e-01 88.2% 65.7%
2c3vA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 47.0 4.07e-01 92.2% 71.3%
1wgyA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 51.0 4.59e-01 98.0% 73.7%
5jpnB04 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.62 48.0 3.76e-01 90.2% 70.2%
3wqbA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 49.0 3.46e-01 90.2% 46.4%
2f4pA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 51.0 3.90e-01 100.0% 56.0%
3liuA01 2.60.40.3160 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 49.0 3.91e-01 96.1% 63.6%
6z9cA01 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.61 46.0 3.62e-01 86.3% 69.7%
4j25F00 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.61 46.0 3.19e-01 84.3% 26.2%
4u7cB04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.60 48.0 3.83e-01 90.2% 76.1%
1p8jA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.60 49.0 3.70e-01 92.2% 50.0%
2oxgC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 3.82e-01 88.2% 65.3%
4ofyD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 3.80e-01 88.2% 73.8%
4pofA03 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.60 44.0 4.52e-01 82.4% 96.0%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 49.0 4.07e-01 94.1% 66.7%
1xe7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 50.0 3.44e-01 94.1% 52.2%
5ja1B00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.60 45.0 4.25e-01 86.3% 66.7%
3mfiA04 3.30.1490.100 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain 0.60 47.0 3.67e-01 90.2% 77.3%
2d93A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 45.0 3.44e-01 86.3% 34.3%
1a21A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 46.0 3.93e-01 94.1% 72.4%
4gr5C01 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.59 45.0 4.26e-01 86.3% 68.8%
1ca1A02 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.59 48.0 3.77e-01 94.1% 90.0%
4zciA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 49.0 3.98e-01 94.1% 72.3%
3mb5A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.59 49.0 4.59e-01 92.2% 98.4%
3thpA02 2.60.120.1520 Mainly Beta › Sandwich › Jelly Rolls › 0.59 49.0 3.61e-01 100.0% 33.6%
1g2rA00 3.30.1230.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like 0.59 48.0 3.98e-01 94.1% 75.5%
1xvsA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.58 45.0 3.47e-01 88.2% 82.1%
5mj6A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 45.0 4.05e-01 92.2% 76.2%
3lgdA00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 43.0 2.58e-01 86.3% 10.2%
1fo0B00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 3.73e-01 94.1% 76.8%
3szpB02 3.40.190.290 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.57 44.0 2.98e-01 86.3% 49.7%
2pstX00 3.90.820.10 Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id 0.57 43.0 4.13e-01 86.3% 72.1%
2kqaA00 2.40.40.10 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain 0.57 48.0 3.80e-01 100.0% 60.8%
7c2fB01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.57 41.0 3.56e-01 80.4% 75.6%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.56 41.0 3.33e-01 84.3% 51.3%
5ccbA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.56 45.0 4.08e-01 92.2% 87.5%
7b0xI01 2.60.40.1090 Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain 0.56 42.0 3.28e-01 88.2% 74.0%
2yrbA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.56 44.0 3.39e-01 94.1% 57.0%
5fljA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 46.0 3.28e-01 100.0% 59.3%
2piaA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 43.0 3.54e-01 90.2% 75.0%
2xotA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.58e-01 86.3% 73.3%
5jtwA03 2.60.40.1940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 3.39e-01 94.1% 77.2%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.55 41.0 3.42e-01 94.1% 65.5%
4gi3C00 3.30.60.30 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › 0.54 42.0 4.11e-01 88.2% 77.2%
4pjeE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 3.50e-01 94.1% 75.0%
5hdwA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.54 39.0 3.14e-01 88.2% 67.9%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 3.37e-01 94.1% 62.2%
3bn6A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.53 38.0 2.92e-01 84.3% 48.1%
6bs6A04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 43.0 3.46e-01 98.0% 63.8%
1js8B02 2.60.310.10 Mainly Beta › Sandwich › Hemocyanin; Chain: A, domain 2 › Haemocyanin C-terminal domain 0.52 38.0 3.29e-01 92.2% 75.2%
2jdaB00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 40.0 3.15e-01 100.0% 67.6%
1yudA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.51 43.0 3.18e-01 100.0% 84.5%
7ylrA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 38.0 3.18e-01 90.2% 81.0%
4pqqA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.50 37.0 2.86e-01 90.2% 48.1%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3637320 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.71 51.0 3.64e-01 92.2% 25.0%
4532030 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.70 50.0 3.55e-01 92.2% 23.5%
5006901 10.12.1.39 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 0.68 50.0 3.97e-01 92.2% 37.3%
3224551 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.67 52.0 4.10e-01 88.2% 75.7%
3987425 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.66 52.0 4.09e-01 88.2% 63.5%
3272151 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 51.0 4.17e-01 88.2% 63.0%
3236043 10.4.1.9 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.64 51.0 4.02e-01 94.1% 40.0%
3414820 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 52.0 4.24e-01 94.1% 53.3%
4946901 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 49.0 4.04e-01 88.2% 76.2%
3214145 10.4.1.9 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.64 53.0 4.20e-01 96.1% 67.3%
4567712 10.32.1.48 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_26 0.63 47.0 3.67e-01 84.3% 50.4%
3222250 10.4.1.9 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_2 0.63 48.0 3.95e-01 92.2% 42.9%
4062534 10.32.1.6 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › P_proprotein 0.63 50.0 3.85e-01 90.2% 48.0%
4945064 10.1.2.192 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Big_7 0.63 49.0 3.88e-01 90.2% 60.9%
1097215 10.9.1.2 beta sandwiches › jelly-roll › C-terminal domain of mullusc hemocyanin › C-terminal domain of mullusc hemocyanin › Haemocyan_bet_s 0.63 47.0 3.85e-01 86.3% 80.2%
3248639 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.62 50.0 4.14e-01 94.1% 69.0%
3629626 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.62 47.0 3.56e-01 90.2% 46.2%
4936907 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 47.0 3.84e-01 88.2% 66.4%
4932670 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.62 49.0 4.05e-01 90.2% 66.3%
4619601 10.32.1.48 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_26 0.61 49.0 3.80e-01 92.2% 52.8%
3980267 7523.1.1.15 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate 0.61 46.0 3.69e-01 84.3% 96.2%
3966483 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.60 48.0 3.82e-01 90.2% 54.8%
3277296 11.1.1.843 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7034 0.59 47.0 3.63e-01 94.1% 66.2%
3248103 11.1.1.1040 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28849 0.59 50.0 3.94e-01 100.0% 65.0%
4027900 10.30.1.0 beta sandwiches › jelly-roll › Latrophilin 1 gal_lectin domain › Latrophilin 1 gal_lectin domain 0.58 45.0 4.02e-01 90.2% 88.7%
4991439 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.58 45.0 4.00e-01 90.2% 76.2%
1833313 4076.2.1.1 a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MbtH 0.58 44.0 4.13e-01 86.3% 68.8%
3992154 1.1.2.7 beta barrels › cradle loop barrel › RIFT-related › double psi › CDC48_N 0.57 46.0 4.39e-01 88.2% 100.0%
3596623 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.57 41.0 3.58e-01 80.4% 78.9%
1030895 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.57 46.0 4.24e-01 92.2% 89.7%
3214090 11.10.1.5 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH_2 0.57 43.0 3.43e-01 90.2% 58.4%
3219055 10.4.1.32 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB_M02D8_5_2nd 0.57 43.0 3.39e-01 86.3% 41.6%
4940468 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 44.0 3.34e-01 94.1% 49.3%
4991109 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.55 44.0 4.22e-01 92.2% 100.0%
5046933 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 3.38e-01 94.1% 65.0%
5039172 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.54 39.0 3.23e-01 84.3% 53.0%
3630011 633.23.1.0 alpha bundles › Bromodomain-like › Claudin › Claudin 0.53 37.0 2.62e-01 76.5% 73.2%
3214023 11.10.1.6 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.53 40.0 3.21e-01 92.2% 60.8%
3791793 864.1.1.0 a+b two layers › DLC › DLC › DLC 0.52 40.0 3.53e-01 90.2% 78.8%
3582464 11.1.1.18 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LTD 0.51 39.0 3.14e-01 94.1% 64.6%
D2 medium residues 83-143
PDB