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OP870146.1__WBF80286.1__F27_0249__00248
Bact-VirOP870146.1__WBF80286.1__F27_0249__00248
Identity
- Accession:
- OP870146 ↗
- Kingdom:
- phage
Quality
65.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Mosigvirus›
Escherichia_phage_vB_Eco_F27
TaxID: 3003733
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-49
Domain cluster:
rep: MH920637.1__AYR01719.1__X__00016__D9-62
D2
high
residues 103-171
Domain cluster:
representative
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zgoA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.69 | 54.0 | 4.16e-01 | 88.4% | 46.7% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 57.0 | 4.79e-01 | 95.7% | 92.8% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.63 | 53.0 | 4.40e-01 | 91.3% | 94.2% |
| 3lltA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 51.0 | 4.59e-01 | 87.0% | 94.6% |
| 4qq1C03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 40.0 | 3.73e-01 | 76.8% | 50.0% |
| 6eotD01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.62 | 52.0 | 3.16e-01 | 95.7% | 45.9% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.61 | 46.0 | 4.41e-01 | 81.2% | 80.5% |
| 1mruA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.61 | 48.0 | 4.37e-01 | 85.5% | 100.0% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.61 | 47.0 | 3.68e-01 | 84.1% | 49.0% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.60 | 50.0 | 3.12e-01 | 95.7% | 39.3% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.59 | 42.0 | 4.47e-01 | 81.2% | 86.7% |
| 3mi6A01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.59 | 50.0 | 3.33e-01 | 100.0% | 90.9% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 49.0 | 3.96e-01 | 95.7% | 77.3% |
| 3tdgA01 | 3.10.450.520 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 45.0 | 4.66e-01 | 87.0% | 89.4% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.56 | 42.0 | 4.01e-01 | 94.2% | 66.7% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 47.0 | 4.62e-01 | 94.2% | 92.1% |
| 6cnhA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 43.0 | 4.10e-01 | 81.2% | 72.5% |
| 2xe4A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.56 | 46.0 | 2.96e-01 | 94.2% | 24.4% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 49.0 | 3.92e-01 | 100.0% | 59.6% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.55 | 42.0 | 3.43e-01 | 84.1% | 46.4% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.55 | 48.0 | 3.15e-01 | 100.0% | 59.2% |
| 4euuA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 44.0 | 4.08e-01 | 88.4% | 98.9% |
| 3vwaA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 44.0 | 4.02e-01 | 87.0% | 95.6% |
| 3v8uA03 | 2.40.128.240 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 37.0 | 3.50e-01 | 76.8% | 55.6% |
| 4i8oA02 | 3.30.160.690 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain | 0.55 | 44.0 | 4.10e-01 | 92.8% | 68.9% |
| 1k90A02 | 3.90.1760.10 | Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain | 0.54 | 39.0 | 3.03e-01 | 76.8% | 73.6% |
| 1h91A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 41.0 | 3.14e-01 | 84.1% | 40.0% |
| 4ewfA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.54 | 43.0 | 2.94e-01 | 89.9% | 76.1% |
| 2eigA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.15e-01 | 95.7% | 80.4% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.53 | 42.0 | 2.81e-01 | 94.2% | 29.6% |
| 2oz8A01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.53 | 36.0 | 3.07e-01 | 73.9% | 85.3% |
| 2qpvA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 43.0 | 3.61e-01 | 97.1% | 65.2% |
| 6w0pB01 | 2.70.98.40 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Glycoside hydrolase, family 65, N-terminal domain | 0.52 | 42.0 | 2.89e-01 | 94.2% | 81.3% |
| 2ei0A02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 35.0 | 2.80e-01 | 71.0% | 61.2% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 36.0 | 3.72e-01 | 72.5% | 87.5% |
| 2qddA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 35.0 | 2.99e-01 | 72.5% | 88.5% |
| 1yr2A02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.52 | 44.0 | 2.89e-01 | 100.0% | 37.2% |
| 1k38A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.52 | 42.0 | 3.00e-01 | 95.7% | 79.1% |
| 3sszA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 35.0 | 2.94e-01 | 73.9% | 87.2% |
| 3jvaA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.51 | 35.0 | 3.04e-01 | 72.5% | 98.2% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.51 | 38.0 | 4.07e-01 | 88.4% | 100.0% |
| 4exrA01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 41.0 | 3.94e-01 | 92.8% | 80.2% |
| 2kd2A01 | 2.40.128.180 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 34.0 | 3.30e-01 | 92.8% | 59.5% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3255468 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.74 | 53.0 | 3.62e-01 | 75.4% | 37.8% |
| 4938919 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 49.0 | 5.04e-01 | 73.9% | 75.4% |
| 4936051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 46.0 | 5.12e-01 | 72.5% | 85.5% |
| 5035742 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 48.0 | 5.15e-01 | 76.8% | 86.7% |
| 4419937 | 77.1.1.0 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein | 0.66 | 53.0 | 4.93e-01 | 94.2% | 69.4% |
| 3479225 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.66 | 47.0 | 4.22e-01 | 76.8% | 75.0% |
| 3254426 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.65 | 48.0 | 3.85e-01 | 78.3% | 45.9% |
| 3243158 | 11.10.1.6 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH | 0.64 | 50.0 | 4.05e-01 | 85.5% | 68.1% |
| 4986260 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 51.0 | 3.27e-01 | 87.0% | 28.7% |
| 358014 | 243.1.1.22 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Lumazine_bd_2 | 0.63 | 53.0 | 4.40e-01 | 91.3% | 94.2% |
| 3199763 | 220.1.1.202 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_FT_N | 0.63 | 43.0 | 3.65e-01 | 72.5% | 84.0% |
| 4404709 | 71.1.1.3 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolB | 0.63 | 50.0 | 3.74e-01 | 94.2% | 34.3% |
| 5056836 | 5.1.3.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylsulfotran_2 | 0.63 | 54.0 | 3.42e-01 | 95.7% | 32.9% |
| 3325704 | 5.1.4.222 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 | 0.62 | 53.0 | 3.37e-01 | 97.1% | 35.8% |
| 3629700 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.61 | 51.0 | 3.26e-01 | 91.3% | 26.0% |
| 3942442 | 12.3.1.25 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_36N | 0.61 | 53.0 | 3.59e-01 | 100.0% | 89.3% |
| 3929846 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.60 | 51.0 | 3.36e-01 | 97.1% | 38.6% |
| 2538670 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.60 | 41.0 | 4.46e-01 | 87.0% | 92.6% |
| 3230371 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.59 | 42.0 | 3.67e-01 | 88.4% | 47.3% |
| 3726251 | 6109.1.1.1 ↗ | a+b two layers › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › ChAPs | 0.59 | 46.0 | 3.51e-01 | 85.5% | 64.1% |
| 3690349 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.59 | 50.0 | 3.06e-01 | 98.6% | 38.3% |
| 5032559 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.59 | 52.0 | 4.78e-01 | 100.0% | 76.7% |
| 3404927 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.59 | 47.0 | 2.95e-01 | 85.5% | 51.1% |
| 4278307 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.59 | 51.0 | 3.78e-01 | 100.0% | 75.3% |
| 3619206 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.58 | 46.0 | 2.84e-01 | 85.5% | 50.5% |
| 3585414 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.58 | 48.0 | 4.06e-01 | 89.9% | 60.0% |
| 3937095 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.58 | 46.0 | 2.89e-01 | 87.0% | 53.2% |
| 3507066 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.57 | 46.0 | 2.86e-01 | 87.0% | 51.2% |
| 4945459 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.57 | 50.0 | 3.22e-01 | 97.1% | 34.7% |
| 3970395 | 4252.1.1.10 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › DUF2804 | 0.57 | 48.0 | 3.46e-01 | 95.7% | 39.5% |
| None | — | 0.57 | 48.0 | 2.79e-01 | 95.7% | 13.9% | |
| 3504293 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.57 | 45.0 | 3.04e-01 | 87.0% | 74.7% |
| 3284940 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.57 | 47.0 | 2.73e-01 | 94.2% | 13.0% |
| 3238362 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 49.0 | 3.23e-01 | 97.1% | 38.7% |
| 3903931 | 5.1.3.6 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 | 0.57 | 48.0 | 3.15e-01 | 97.1% | 42.9% |
| 4192062 | 5.1.7.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 | 0.56 | 48.0 | 2.68e-01 | 97.1% | 13.8% |
| 3915194 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.56 | 48.0 | 3.08e-01 | 97.1% | 32.5% |
| 4001579 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.56 | 49.0 | 4.21e-01 | 100.0% | 84.3% |
| 4285199 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.56 | 45.0 | 4.15e-01 | 100.0% | 66.3% |
| 3616512 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.56 | 44.0 | 2.78e-01 | 85.5% | 53.7% |
| 3501867 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.56 | 44.0 | 2.42e-01 | 85.5% | 17.4% |
| 5071985 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 48.0 | 3.63e-01 | 100.0% | 73.0% |
| 3704328 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.56 | 41.0 | 3.92e-01 | 92.8% | 66.3% |
| 3782542 | 6109.1.1.1 ↗ | a+b two layers › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › N-terminal domain of chitin biosynthesis protein CHS6 › ChAPs | 0.56 | 43.0 | 3.20e-01 | 85.5% | 62.6% |
| 3925504 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.56 | 43.0 | 2.76e-01 | 85.5% | 52.8% |
| 4285404 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.55 | 45.0 | 3.08e-01 | 88.4% | 40.8% |
| 5040649 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.55 | 47.0 | 3.34e-01 | 97.1% | 46.8% |
| 4029464 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 45.0 | 3.57e-01 | 89.9% | 67.1% |
| 5003245 | 243.8.1.0 ↗ | a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein | 0.55 | 42.0 | 4.20e-01 | 84.1% | 84.3% |
| 3785709 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.55 | 48.0 | 3.02e-01 | 100.0% | 33.9% |
| 3653889 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 47.0 | 3.06e-01 | 100.0% | 48.5% |
| 4436471 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.54 | 37.0 | 3.27e-01 | 71.0% | 55.2% |
| 3940325 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.54 | 44.0 | 3.05e-01 | 94.2% | 32.6% |
| 5013654 | 5.1.5.11 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PQQ_2 | 0.54 | 47.0 | 3.09e-01 | 100.0% | 34.2% |
| 3224519 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.54 | 42.0 | 2.70e-01 | 87.0% | 51.7% |
| 5054384 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.54 | 44.0 | 4.47e-01 | 98.6% | 91.4% |
| 3576886 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.53 | 44.0 | 2.95e-01 | 95.7% | 32.7% |
| 3656110 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.53 | 46.0 | 2.99e-01 | 100.0% | 45.5% |
| 3619927 | 9.2.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Avidin/Streptavidin › Avidin/Streptavidin › DUF7042 | 0.53 | 46.0 | 3.95e-01 | 100.0% | 85.2% |
| 5014253 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.53 | 44.0 | 4.44e-01 | 92.8% | 92.9% |
| 4999447 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.52 | 43.0 | 3.01e-01 | 100.0% | 40.4% |
| 3591269 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 45.0 | 2.97e-01 | 100.0% | 41.2% |
| 4025955 | 5.1.4.271 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, PF30361 | 0.52 | 46.0 | 2.83e-01 | 100.0% | 34.7% |
| 3258731 | 241.15.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › PI31_Prot_N | 0.51 | 43.0 | 3.53e-01 | 100.0% | 67.1% |
| 4032029 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 43.0 | 3.88e-01 | 94.2% | 91.6% |
| 3240511 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.51 | 44.0 | 3.90e-01 | 100.0% | 67.6% |
| 4031833 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.50 | 39.0 | 4.14e-01 | 82.6% | 96.7% |
D3
medium
residues 485-556
Domain cluster:
rep: OK018184.1__UDY80622.1__X__00229__D204-264
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.74 | 49.0 | 3.61e-01 | 100.0% | 27.2% |
| 1cm0A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 46.0 | 3.51e-01 | 80.6% | 53.7% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 42.0 | 3.50e-01 | 100.0% | 40.3% |
| 2ge3A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 45.0 | 3.47e-01 | 80.6% | 54.9% |
| 3r1kA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.60 | 42.0 | 3.50e-01 | 75.0% | 62.4% |
| 2i79D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 43.0 | 3.31e-01 | 76.4% | 55.7% |
| 1c0aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.59 | 51.0 | 3.34e-01 | 98.6% | 35.8% |
| 3otlA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.59 | 43.0 | 3.41e-01 | 100.0% | 37.3% |
| 1p32B00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.58 | 43.0 | 3.26e-01 | 100.0% | 33.3% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.58 | 42.0 | 3.43e-01 | 100.0% | 39.6% |
| 7k98B04 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 40.0 | 2.90e-01 | 76.4% | 24.2% |
| 1t7vA01 | 3.30.500.10 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like | 0.57 | 49.0 | 3.74e-01 | 100.0% | 71.9% |
| 4my0C01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 42.0 | 3.47e-01 | 83.3% | 63.6% |
| 7b3aA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 47.0 | 3.68e-01 | 93.1% | 49.0% |
| 4zbgA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 45.0 | 3.57e-01 | 91.7% | 57.1% |
| 2ae6A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 41.0 | 3.36e-01 | 81.9% | 52.4% |
| 4avaA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.55 | 46.0 | 3.47e-01 | 95.8% | 50.3% |
| 2ztgA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 47.0 | 3.29e-01 | 100.0% | 85.9% |
| 3t9yA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 38.0 | 3.13e-01 | 76.4% | 64.2% |
| 1xf8A02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 40.0 | 3.03e-01 | 80.6% | 50.3% |
| 1ut7B01 | 2.170.150.80 | Mainly Beta › Beta Complex › Metal Binding Protein, Guanine Nucleotide Exchange Factor; Chain A › NAC domain | 0.52 | 40.0 | 3.37e-01 | 91.7% | 48.0% |
| 6qp9B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 2.68e-01 | 97.2% | 44.7% |
| 6aiiA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 2.91e-01 | 100.0% | 40.9% |
| 6wqbA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.51 | 37.0 | 2.98e-01 | 76.4% | 53.6% |
| 1oqvA00 | 3.30.1690.10 | Alpha Beta › 2-Layer Sandwich › TcpA-like pilin › TcpA-like pilin | 0.50 | 35.0 | 2.80e-01 | 76.4% | 85.4% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1841016 | 79.1.1.9 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp34_trimer | 0.85 | 74.0 | 5.01e-01 | 100.0% | 28.5% |
| 2417913 | 243.19.1.0 ↗ | a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains | 0.85 | 74.0 | 4.49e-01 | 100.0% | 16.9% |
| 4133228 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.75 | 50.0 | 3.68e-01 | 100.0% | 27.0% |
| 3965943 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.72 | 50.0 | 3.69e-01 | 100.0% | 27.5% |
| 4485546 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.71 | 50.0 | 3.73e-01 | 100.0% | 29.2% |
| 3499681 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.69 | 48.0 | 4.43e-01 | 100.0% | 55.9% |
| 3928388 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.68 | 48.0 | 3.41e-01 | 79.2% | 25.1% |
| 3229731 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.66 | 55.0 | 3.67e-01 | 90.3% | 26.2% |
| 4013292 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.61 | 44.0 | 3.54e-01 | 75.0% | 90.4% |
| 3409717 | 633.33.1.1 ↗ | alpha bundles › Bromodomain-like › Rogdi › Rogdi › Rogdi_lz | 0.61 | 49.0 | 3.33e-01 | 90.3% | 24.8% |
| 4028168 | 5084.5.1.3 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Porin › Porin_3 | 0.60 | 49.0 | 3.32e-01 | 100.0% | 23.2% |
| 3978632 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.60 | 43.0 | 3.57e-01 | 76.4% | 49.2% |
| 4999326 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.59 | 43.0 | 3.34e-01 | 76.4% | 46.1% |
| 3952526 | 213.1.1.72 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1, Acetyltransf_10 | 0.58 | 43.0 | 3.16e-01 | 80.6% | 67.0% |
| 3620644 | 4018.1.1.2 ↗ | a+b two layers › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › a+b domain in carbohydrate phosphatases › Inositol_P | 0.57 | 49.0 | 3.69e-01 | 100.0% | 66.3% |
| 3986406 | 213.1.1.64 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › DUF535 | 0.57 | 51.0 | 3.61e-01 | 100.0% | 34.4% |
| 2754650 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.56 | 47.0 | 3.81e-01 | 93.1% | 59.4% |
| 5065513 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.55 | 47.0 | 3.59e-01 | 98.6% | 57.0% |
| 3205039 | 63.1.1.5 ↗ | beta barrels › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › Mannose 6-phosphate receptor domain › ATG27 | 0.55 | 46.0 | 3.68e-01 | 97.2% | 58.7% |
| 1883326 | 4998.2.1.1 ↗ | beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE insert domain › Flagellar hook protein flgE insert domain › FlgE_2nd | 0.55 | 41.0 | 3.49e-01 | 100.0% | 47.2% |
| 5001079 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.54 | 41.0 | 3.17e-01 | 83.3% | 48.9% |
| 3478818 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 2.96e-01 | 100.0% | 37.8% |
| 4973055 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.52 | 44.0 | 3.37e-01 | 97.2% | 57.5% |
| 4463771 | 3347.1.1.0 ↗ | beta meanders › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 › Uncharacterized protein BF3112 | 0.51 | 40.0 | 3.64e-01 | 100.0% | 61.0% |
| 3368864 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.51 | 37.0 | 3.84e-01 | 98.6% | 84.6% |
| 3884108 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.51 | 45.0 | 3.05e-01 | 100.0% | 77.4% |
| 4959674 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.51 | 42.0 | 3.35e-01 | 93.1% | 58.0% |
| 3936347 | 868.1.1.3 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › Med20 | 0.51 | 39.0 | 2.94e-01 | 84.7% | 76.8% |
| 3412288 | 298.1.1.6 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › G6PD_C | 0.50 | 44.0 | 2.93e-01 | 100.0% | 63.2% |
| 3487569 | 7525.1.1.2 ↗ | a/b three-layered sandwiches › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › Phosphoglycerate mutase-like › His_Phos_2 | 0.50 | 40.0 | 2.58e-01 | 95.8% | 49.1% |
D4
medium
residues 607-666
Domain cluster:
rep: LN881737.1__CUL03539.1__X__00001__D148-210