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WAE39477.1
Arc-VirOP880252__WAE39477.1__LDLAKGPJ-00053__00053
Identity
- Accession:
- OP880252 ↗
- Protein ID:
- WAE39477.1 ↗
- Kingdom:
- archaea
Quality
85.2
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Nakonvirales›
Ekchuahviridae›
Kukulkanvirus›
Methanophagales_virus_GBV301
TaxID: 2999280
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-112
Domain cluster:
rep: OP880252__WAE39478.1__LDLAKGPJ-00054__00054__D2-98
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yqeA01 | 3.40.630.50 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like | 0.65 | 58.0 | 4.89e-01 | 100.0% | 94.6% |
| 3nm6B00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.63 | 57.0 | 4.52e-01 | 100.0% | 97.8% |
| 4mchA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.63 | 56.0 | 4.41e-01 | 100.0% | 90.1% |
| 5mx4A00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.63 | 56.0 | 4.44e-01 | 100.0% | 93.6% |
| 3u40D00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.62 | 55.0 | 4.32e-01 | 100.0% | 90.9% |
| 3qpbF00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.62 | 55.0 | 4.26e-01 | 100.0% | 90.0% |
| 3n5fA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.62 | 54.0 | 4.09e-01 | 100.0% | 73.3% |
| 4ewtA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.61 | 56.0 | 4.17e-01 | 100.0% | 72.6% |
| 3wz2B00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.61 | 55.0 | 4.35e-01 | 100.0% | 79.8% |
| 1vgyA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.61 | 54.0 | 4.16e-01 | 100.0% | 74.7% |
| 1t8sA02 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.61 | 54.0 | 3.98e-01 | 100.0% | 83.1% |
| 1y7eA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.60 | 53.0 | 4.00e-01 | 100.0% | 69.9% |
| 4axvA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 52.0 | 4.09e-01 | 100.0% | 80.5% |
| 2e85B00 | 3.40.50.1450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HybD-like | 0.55 | 50.0 | 4.45e-01 | 100.0% | 93.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 10186 | 2011.1.1.10 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › FGase | 0.68 | 62.0 | 4.72e-01 | 100.0% | 88.1% |
| 5000976 | 2011.1.1.10 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › FGase | 0.68 | 61.0 | 4.80e-01 | 100.0% | 84.8% |
| 5023853 | 2011.1.1.10 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › FGase | 0.67 | 61.0 | 5.22e-01 | 100.0% | 97.1% |
| 3956568 | 2011.1.1.13 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Gamma_PGA_hydro | 0.66 | 59.0 | 4.97e-01 | 100.0% | 87.6% |
| 4971845 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.66 | 59.0 | 5.09e-01 | 100.0% | 91.6% |
| 5032749 | 2011.4.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Peptidase_C15 | 0.66 | 59.0 | 4.85e-01 | 100.0% | 92.2% |
| 3885123 | 2011.4.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Peptidase_C15 | 0.65 | 59.0 | 4.84e-01 | 100.0% | 90.6% |
| 3593711 | 2011.4.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) | 0.65 | 58.0 | 4.58e-01 | 100.0% | 98.3% |
| 4171039 | 2011.2.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › tRNA_deacylase | 0.65 | 59.0 | 5.15e-01 | 100.0% | 97.0% |
| 3269477 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.65 | 57.0 | 4.44e-01 | 100.0% | 89.6% |
| 3491242 | 2011.4.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Peptidase_C15 | 0.64 | 57.0 | 4.73e-01 | 100.0% | 94.5% |
| 4997426 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.64 | 57.0 | 4.66e-01 | 100.0% | 93.8% |
| 5070079 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.63 | 56.0 | 4.48e-01 | 100.0% | 78.7% |
| 3845073 | 2011.4.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Peptidase_C15 | 0.62 | 56.0 | 4.60e-01 | 100.0% | 91.2% |
| 5061205 | 2011.1.1.18 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › AstE_AspA_cat | 0.62 | 56.0 | 4.43e-01 | 100.0% | 73.5% |
| 4941494 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.62 | 56.0 | 4.36e-01 | 100.0% | 75.8% |
| 5037366 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.62 | 56.0 | 4.47e-01 | 100.0% | 85.4% |
| 3280165 | 2011.1.1.20 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20, Peptidase_M28 | 0.62 | 55.0 | 4.13e-01 | 100.0% | 75.4% |
| 3275591 | 2011.1.1.21 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Gaa1 | 0.62 | 55.0 | 3.82e-01 | 100.0% | 62.1% |
| 1087598 | 2011.2.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 | 0.62 | 55.0 | 4.34e-01 | 100.0% | 92.4% |
| 5036579 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.61 | 55.0 | 4.28e-01 | 100.0% | 76.7% |
| 5056782 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.61 | 55.0 | 4.31e-01 | 100.0% | 75.4% |
| 3593576 | 2011.1.1.17 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › DUF2817 | 0.61 | 54.0 | 3.86e-01 | 100.0% | 81.6% |
| 3613887 | 2011.1.1.17 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › DUF2817 | 0.61 | 53.0 | 3.72e-01 | 100.0% | 75.9% |
| 4933600 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.60 | 54.0 | 4.41e-01 | 100.0% | 86.7% |
| 4951535 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.60 | 53.0 | 4.27e-01 | 100.0% | 79.1% |
| 3742225 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.59 | 52.0 | 3.86e-01 | 100.0% | 57.4% |
| 5039710 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.59 | 52.0 | 3.92e-01 | 100.0% | 72.2% |
| 4990779 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.59 | 53.0 | 4.19e-01 | 100.0% | 78.7% |
| 5041474 | 2011.1.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M20 | 0.58 | 51.0 | 4.10e-01 | 100.0% | 77.4% |
| 3695158 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.57 | 51.0 | 4.17e-01 | 100.0% | 73.8% |
| 5083909 | 2011.2.1.4 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › HycI | 0.54 | 49.0 | 4.47e-01 | 100.0% | 97.9% |
| 4933325 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.54 | 48.0 | 4.01e-01 | 100.0% | 77.9% |
| 4200171 | 212.1.1.8 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P | 0.53 | 31.0 | 3.13e-01 | 100.0% | 56.5% |
| 4513587 | 212.1.1.8 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribonuclease_P | 0.52 | 32.0 | 3.27e-01 | 100.0% | 62.9% |
| 3568683 | 2008.1.1.127 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › FAST_2+RAP | 0.51 | 43.0 | 4.21e-01 | 94.6% | 98.4% |